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FASTA Sequence PDB Format mmCIF Format
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8R8K

Xbb-4 fab in complex with sars-cov-2 ba.2.12.1 spike glycoprotein

PDB DOI: 10.2210/pdb8r8k/pdb

Classification: VIRAL PROTEIN
Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 , Tequatrovirus T4

Deposited: 2023-11-29
Deposition Author(s): Duyvesteyn, H.M.E. , Ren, J. , Stuart, D.I.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.41 Å

8r8k
Literature

Xbb-4 fab in complex with sars-cov-2 ba.2.12.1 spike glycoprotein

Duyvesteyn, H.M.E. , Ren, J. , Stuart, D.I.

Primary Citation of Related Structures: 8R8K


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike glycoprotein,Fibritin A 1285 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 , Tequatrovirus T4 MFVFLVLLPLVSSQCVNLITRTQSYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLDVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLGRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVGGNYNYQYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCYFPLRSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEYVNNSYECDIPIGAGICASYQTQTKSHRRARSVASQSIIAYTMSLGAENLVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLKRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKYFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNHNAQALNTLVKQLSSKFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGRSLEVLFQGPGHHHHHHHHGSAWSHPQFEKGGGSGGGSGGSAWSHPQFEK
XBB-4 Fab Heavy chain H 233 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 , Tequatrovirus T4 EVQLVQSGGGLVKPGGSLRLSCAASGFSFTNAWMNWVRQAPGKGLEWVGRIKSKADGGTTDYAAPVKGKFTISRDDSKNTLYLQMNSLKTEDTAIYYCTSDVYDFSTGFGQRDDFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
XBB-4 Fab Light chain L 214 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 , Tequatrovirus T4 DIVMTQSPSSLSASVGDRVTITCRASQSISYFLNWYQQKPGKAPKLLISAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSSLITFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-11-29
Deposition Author(s): Duyvesteyn, H.M.E. , Ren, J. , Stuart, D.I.