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FASTA Sequence PDB Format mmCIF Format
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8QTD

Local refinement of sars-cov-2 ba.2.86 spike and xbb-7 fab

PDB DOI: 10.2210/pdb8qtd/pdb

Classification: VIRAL PROTEIN
Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2

Deposited: 2023-10-12
Deposition Author(s): Duyvesteyn, H.M.E. , Ren, J. , Stuart, D.I.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.6 Å

Literature

Local refinement of sars-cov-2 ba.2.86 spike and xbb-7 fab

Duyvesteyn, H.M.E. , Ren, J. , Stuart, D.I.

Primary Citation of Related Structures: 8QTD


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike glycoprotein,Fibritin A 1284 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 MFVFLVLLPLVSSQCVMPLFNLITTTQSYTNSFTRGVYYPDKVFRSSVLHLTQDLFLPFFSNVTWFHAISGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVFIKVCEFQFCNDPFLDVYHKNNKSWMESESGVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPIIGRDFPQGFSALEPLVDLPIGINITRFQTLLALNRSYLTPGDSSSGWTAGAADYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNVTNLCPFHEVFNATRFASVYAWNRTRISNCVADYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIKGNEVSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKHSGNYDYWYRLFRKSKLKPFERDISTEIYQAGNKPCKGKGPNCYFPLQSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTKSNKKFLPFQQFGRDIVDTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVSVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEYVNNSYECDIPIGAGVCASYQTQTKSHGSASSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLKRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKYFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLFSTASALGKLQDVVNHNAQALNTLVKQLSSKFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQLELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGRSLEVLFQGPGHHHHHHHHGSAWSHPQFEKGGGSGGGSGGSAWSHPQFEK
XBB-7 fab heavy chain H 131 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 QVQLVESGGGLVQPGGSLRLSCAASGFIFRSFSMSWVRQAPGKGLEWVANINEDGGEKYYVDSVKGRFTISRDYAKDSVFLQMNSLRAEDTAVYYCARVGPYYYDSAGYYRRHYHFGMDVWGQGTTVTVSS
XBB-7 fab light chain L 100 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 QSALTQPASVSGSPGQSITISCTGTSSDIGDYNYVSWYQQHPGKAPKLMILSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTGSVTVFGGGTKLTVL
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-10-12
Deposition Author(s): Duyvesteyn, H.M.E. , Ren, J. , Stuart, D.I.