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8Q9P

Crystal structure of the mads-box/mef2 domain of mef2d bound to dsdna and hdac5 deacetylase binding motif

PDB DOI: 10.2210/pdb8q9p/pdb

Classification: TRANSCRIPTION
Organism(s): Homo Sapiens

Deposited: 2023-08-20
Deposition Author(s): Angelini, A. , Biondi, B. , Brancolini, C. , Carli, A. , Cendron, L. , Chinellato, M. , Di Giorgio, E. , Mazzocato, Y. , Perin, S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.2 Å

8q9p
Literature

Crystal structure of the mads-box/mef2 domain of mef2d bound to dsdna and hdac5 deacetylase binding motif

Angelini, A. , Biondi, B. , Brancolini, C. , Carli, A. , Cendron, L. , Chinellato, M. , Di Giorgio, E. , Mazzocato, Y. , Perin, S.

Primary Citation of Related Structures: 8Q9P


Proteins
Molecule Chains Sequence Length Organism Sequence
HDAC5 (histone deacetylase 5) binding motif peptide: TRP-GLY-SER-GLY-GLU-VAL-LYS-LEU-ARG-LEU-GLN-GLU-PHE-LEU-LEU-SER-LYS-SER X 18 Homo Sapiens WGSGEVKLRLQEFLLSKS
MEF2D protein A 95 Homo Sapiens MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNG
MEF2D protein B 95 Homo Sapiens MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNG

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
MADS box dsDNA fw: AACTATTTATAAGA k 14 NA AACTATTTATAAGA
MADS box dsNA rev:TCTTATAAATAGTT l 14 NA TCTTATAAATAGTT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2023-08-20
Deposition Author(s): Angelini, A. , Biondi, B. , Brancolini, C. , Carli, A. , Cendron, L. , Chinellato, M. , Di Giorgio, E. , Mazzocato, Y. , Perin, S.