PDBi (Protein Data Bank in India)

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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8Q87

Structure of the g. gallus 80s rotated ribosome in complex with eef2 and serbp1

PDB DOI: 10.2210/pdb8q87/pdb

Classification: RIBOSOME
Organism(s): Caldanaerobius

Deposited: 2023-08-18
Deposition Author(s): Jenner, L. , Nurullina, L. , Yusupov, M.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.4 Å

8q87
Literature

Structure of the g. gallus 80s rotated ribosome in complex with eef2 and serbp1

Jenner, L. , Nurullina, L. , Yusupov, M.

Primary Citation of Related Structures: 8Q87


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
28S rRNA b5 4441 NA CGCGACCUCAGGUCAGACGUGGCGACCCGCUGAAUUUAAGCAUAUUAGUCAGCGGAGGAAAAGAAACUAACGAGGAUUCCCUCAGUAACGGCGAGUGAAGAGGGAAGAGCCCAGCGCCGAAUCCCCGCCCCGCGGUGGGGCGCGGGAGGUGUGGCGUACGGAAGCCCCCAUCCCCGGCGCCGCUCUCGGGGGGCCCAAGUCCUUCUGAUCGAGGCCCAGCCCGCGGACGGUGUGAGGCCGGUAGCGGCCCCCCGGCGCGCCGGGCCCGGGGCUUCUCGGAGUCGGGUUGCUUGGGAAUGCAGCCCAAAGCGGGUGGUAAACUCCAUCUAAGGCUAAAUACCGGCACGAGACCGAUAGCCAACAAGUACCGUAAGGGAAAGUUGAAAAGAACUUUGAAGAGAGAGUUCAAGAGGGCGUGAAACCGUUAAGAGGUAAACGGGUGGGGUCCGCGCAGUCGGCCCGGAGGAUUCAACCCGGCGGGCCAAGGUCGGCCGGCGCGGGCGCCGUCGGAUCCCCGCCUCCGCCUCCCCUCCGUCCCUCCCCUUCGCCGGGGCGGGGCGGGCCCAGGGGGGGCGGGCGGGCCGGGGACCGCCGCCCGGCCGGCGUCCGGCCCCCGUCGGGCGCAUUUCCUCCGCGGCGGUGCGCCGCGACCGGCUCCGGGACGGCUGGGAAGGGCUGCCGGCGGGCAGGUGGCCCGGCGCCGCGCGAGCGGCCGCCGGGUGUUAUAGCCGCCGGGCCCGGAUCGUCGCCGAAUCCCGGGGCCGAGGGAGAGGACCGCCGCCGCGCCCUCCCCCGGAGGGGGCGGCCCCCCGGAGGGCCCCCCGCGGCCGGACCGGCGUCGGGCCGGCCGCGCCGCGCGCGCGUCCGCGCCGCCGCCGUACGCCGCCGCUCGCUCUCUCUCCGUUCCCCGCCCCGGGUCCGUCCCGGGGCGCGGGGGCGGGGGGGGUCGGGUGUCCGGCGCGCGGCUCGGCGCGGCGCCGCGCGUGUGGCGCGCGCCUCCAGCCCGGCGCGGGCGAGGCCGCGGGGGGCGCCGGGGGGGAACCUUCCCCCUUCUGUUCGGGCCGCCUCCGUUCCCGCGGGGGCGGCCCGUUCGGGGGACGGGCCCGCCGGCCCCCGGCGCCGCUGUCCGACCGGGGCGGACUGCGCUCAGUGCGCCCCGACCGCGCGGCGCCGCCGGGCCGGGCUCGGGCCACGCCAGGGCGCCCGGGGUCCGCGGCGACGUCGGCUACCCACCCGACCCGUCUUGAAACACGGACCAAGGAGUCUAGCACGCGCGCGAGUCGGCGGCUCGCGCGAAAGCCCGCGGCGCAAUGAAGGUGAGGGCCGGCGCGCGCCGGCUGAGGUGGGAUCCCGGGGCGGCAGGCCGGAAGGCCCCGGGCGCACCACCGGCCCGUCUCGCCCGCCUCGCCGGGGAGGUGGAGCAUGAGCGCGCGUGCUAGGACCCGAAAGAUGGUGAACUAUGCCUGGGCAGGGCGAAGCCAGAGGAAACUCUGGUGGAGGUCCGUAGCGGUCCUGACGUGCAAAUCGGUCGUCCGACCCGGGUAUAGGGGCGAAAGACUAAUCGAACCAUCUAGUAGCUGGUUCCCUCCGAAGUUUCCCUCAGGAUAGCUGGCGCUCGGGGCGGCGGUGCAGUUUUACCCGGUAAAGCGAAUGAUUAGAGGUCUUGGGGCCGAAACGAUCUCAACCUAUUCUCAAACUUUCAAUGGGUAAGACGCCCGGCUCGCUGGCGUGGAGCCGGGCCGUGGAAUGCGAGCGCUCAGUGGGCCACUUUUGGUAAGCAGAACUGGCGCUGCGGGAUGAACCGAACGCCGGGUUAAGGCGCCCGAUGCCGACGCUCAUCAGAGCCCAGAAAAGGUGUUGGUUGAUCUAGACAGCAGGACGGUGGCCAUGGAAGUCGGAACCCGCUAAGGAGUGUGUAACAACUCACCUGCCGAAUCAACUAGCCCUGAAAAUGGAUGGCGCUGGAGCGUCGGGCCCAUACCCGGCCGUCGCCGGCGGUGCGGAGCCGCGGGGGCUACGCCGCGACGAGUAGGAGGGCCGCUGCGGUGCGCCUGGAAGCCUGGGGCGCGGGCCCGGGUGGAGCCGCCGCAGGUGCAGAUCUUGGUGGUAGUAGCAACUAUUCAAACGAGAGCUUUGAAGGCCGAAGUGGAGCAGGGUUCCAUGUGAACAGCAGUUGAACAUGGGUCAGUCGGUCCUAAGCGAUAGGCGAGCGCCGUUCCGAAGGGACGGGCGAUGGCCUCCGUUGCCCUCAGCCGAUCGAAAGGGAGUCGGGUUCAGAUCCCCGAAUCCGGAGCGGCGGAGACGGGCGCCGCGAGGCGCCCAGUGCGGUAACGCAAGCGAUCCCGGAGAAGCCGGCGGGAGCCCCGGGGAGAGUUCUCUUUUCUUUGUGAAGGGCCGGGCGCCCUGGAACGGGUUCGCCCCGAGAGAGGGGCCCGCGCCUUGGAAAGCGUCGCGGUUCCGGCGGCGUCCGGUGAGCUCUCGCUGGCCCGUGAAAAUCCGGGGGAGAGGGUGUAAAUCUCGCGCCGGGCCGUACCCAUAUCCGCAGCAGGUCUCCAAGGUGAACAGCCUCUGGCAUGUUGGACCAAUGUAGGUAAGGGAAGUCGGCAAGCCGGAUCCGUAACUUCGGGAUAAGGAUUGGCUCUAAGGGCUGGGUCGGUCGGGCUGGGGCGCGAAGCGGGGCUGGGCGCGCGCCGCGGCUGGACGAGGCGCCGCCCGCCCCCGCCCCCCCUUUCCCCGCUCCCGCUCGCCGGGGCGCCGGGGGGGGGGGUCAGCGGGCGGCGCGGCGGCGGCGACUCUGGACGCGCGCCGGGCCCUUCCCGUGGAUCGCCCCAGCUGCGGCGGGCGCCGCUCGCCCCCCUCCUUGCCCCUCCGCCCCCCCGCUCCCGGCGCCCCUCCCGUCGGCCGUCGUCCCGGCCGCCCCCCGUCCCGAGCGCCCUCCCCGCGAGGGCGCGAGGGGCGGCGGCGGCGGCCGCGGGCGCGGCGGCGGCGGGGGGGGGCCCGCCGGCGGCGCCGGGCGGGGCGGUCCCGGGCGGGGGGGGUCUCCGGGCCGGCGCCCCGCCUCGGCCGGCGCCUAGCAGCCGGCUUAGAACUGGUGCGGACCAGGGGAAUCCGACUGUUUAAUUAAAACAAAGCAUCGCGAAGGCCCGCGGCGGGUGUUGACGCGAUGUGAUUUCUGCCCAGUGCUCUGAAUGUCAAAGUGAAGAAAUUCAAUGAAGCGCGGGUAAACGGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUCUAAUUAGUGACGCGCAUGAAXGGAUGAACGAGAUUCCCACUGUCCCUAUCUACUAUCCAGCGAAACCACAGCCAAGGGAACGGGCUUGGCGGAAUCAGCGGGGAAAGAAGACCCUGUUGAGCUUGACUCUAGUCUGGCGCUGUGAAGAGACAUGAGAGGUGUAGAAUAAGUGGGAGGCCCCGCGGUCGCGCGACCCGCGCCGCGGCCCGGCCGCCGGUGAAAUACCACUACUCUGAUCGUUUUUUCACUUACCCGGUGAGGCGGGGGGGCGAGCCCCGAGGGGCUCUCGCUUCUGGCGCCAAGCGCCCGGCGCGCGCCGGGCGCGACCCGCUCCGGGGACAGCGUCAGGUGGGGAGUUUGACUGGGGCGGUACACCUGUCAAAGCGUAACGCAGGUGUCCUAAGGCGAGCUCAGGGAGGCCAGAAACCUCCCGUGGAGCAGAAGGGCAAAAGCUCGCUUGAUCUUGAUUUUCAGUACGAAUACAGACCGUGAAAGCGGGGCCUCACGAUCCUUCUGACUUUUUGGGUUUUAAGCAGGAGGUGUCAGAAAAGUUACCACAGGGAUAACUGGCUUGUGGCGGCCAAGCGUUCAUAGCGACGUCGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCUAUCAUUGUGAAGCAGAAUUCACCAAGCGUUGGAUUGUUCACCCACUAAUAGGGAACGUGAGCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACUGAUGAUGUGUUGUUGCGCUAGUAAUCCUGCUCAGUACGAGAGGAACCGCAGGUUCAGACAUUUGGUGUAUGUGCUUGGCUGAGGAGCCACUGGAGCGAGGCUACCAUCUGUGGGAUUAUGACUGAACGCCUCUAAGUCAGAAUCCCCCCUAAACGUAGCGAUACCGCAGCGCCGAGGCGCCUCGGUGGGCUCGCGAUAGCCGGCCGCCGCCCCCCUCGGGCGGGCGGUCGGUGCGGAGCGCCGCUCGUGGUCGGGACCGGAGCGCGGACAGAUGUGGCGCCGCCUCUCCCCCGCCGCGUACCGCAUGUUCGUGGGGAACCCGGUGCUAAAUCAUUCGUAGACGACCUGAUUCUGGGUCGGGGUUUCGUACGUAGCAGAGCAGCUCCCUCGCUGCGAUCUAUUGAGAGUCAGCCCUCGACACAAGCUUUUGUC
5.8S rRNA b8 157 NA CAACUCUUAGCGGUGGAUCACUCGGCUCGUGCGUCGAUGAAGAACGCAGCUAGCUGCGAGAAUUAAUGUGAAUUGCAGGACACAUUGAUCAUCGACACUUCGAACGCACUUGCGGCCCCGGGUUCCUCCCGGGGCUACGCCUGCCUGAGCGUCGCUU
5S rRNA b7 119 NA GCCUACGGCCAUCCCACCCUGGUAACGCCCGAUCUCGUCUGAUCUCGGAAGCUAAGCAGGGUCGGGCCUGGUUAGUACUUGGAUGGGAGACCUCCUGGGAAUACCGGGUGCUGUAGGCU
18S rRNA a2 1823 NA UACCUGGUUGAUCCUGCCAGUAGCAUAUGCUUGUCUCAAAGAUUAAGCCAUGCAUGUCUAAGUACACACGGGCGGUACAGUGAAACUGCGAAUGGCUCAUUAAAUCAGUUAUGGUUCCUUUGGUCGCUCCCCUCCCGUUACUUGGAUAACUGUGGUAAUUCUAGAGCUAAUACAUGCCGACGAGCGCCGACCUCCGGGGACGCGUGCAUUUAUCAGACCAAAACCAACCCGGGCUCGCCCGGCGGCUUUGGUGACUCUAGAUAACCUCGAGCCGAUCGCACGCCCCCGUGGCGGCGACGACCCAUUCGAAUGUCUGCCCUAUCAACUUUCGAUGGUACUGUCUGUGCCUACCAUGGUGACCACGGGUAACGGGGAAUCAGGGUUCGAUUCCGGAGAGGGAGCCUGAGAAACGGCUACCACAUCCAAGGAAGGCAGCAGGCGCGCAAAUUACCCACUCCCGACCCGGGGAGGUAGUGACGAAAAAUAACAAUACAGGACUCUUUCGAGGCCCUGUAAUUGGAAUGAGUCCACUUUAAAUCCUUUAACGAGGAUCCAUUGGAGGGCAAGUCUGGUGCCAGCAGCCGCGGUAAUUCCAGCUCCAAUAGCGUAUAUUAAAGUUGCUGCAGUUAAAAAGCUCGUAGUUGGAUCUUGGGAUCGAGCUGGCGGUCCGCCGCGAGGCGAGCUACCGCCUGUCCCAGCCCCUGUCUCUCGGCGCCCCCUCGAUGCUCUUAACUGAGUGUCCCGCGGGGCCCGAAGCGUUUACUUUGAAAAAAUUAGAGUGUUCAAAGCAGGCUGGCCGCCGGAAUACUCCAGCUAGGAAUAAUGGAAUAGGACUCCGGUUCUAUUUUGUUGGUUUUCGGAAACGGGGCCAUGAUUAAGAGGGACGGCCGGGGGCAUUCGUAUUGUGCCGCUAGAGGUGAAAUUCUUGGACCGGCGCAAGACGAACUAAAGCGAAAGCAUUUGCCAAGAAUGUUUUCAUUAAUCAAGAACGAAAGUCGGAGGUUCGAAGACGAUCAGAUACCGUCGUAGUUCCGACCAUAAACGAUGCCGACUCGCGAUCCGGCGGCGUUAUUCCCAUGACCCGCCGGGCAGCUCCCGGGAAACCCAAGUCUUUGGGUUCCGGGGGGAGUAUGGUUGCAAAGCUGAAACUUAAAGGAAUUGACGGAAGGGCACCACCAGGAGUGGAGCCUGCGGCUUAAUUUGACXCAACACGGGAAACCUCACCCGGCCCGGACACGGACAGGAUUGACAGAUUGAGAGCUCUUUCUCGAUUCCGUGGGUGGUGGUGCAUGGCNGUUCUUAGUUGGUGGAGCGAUUUGUCUGGUUAAUUCCGAUAACGAACGAGACUCUGGCAUGCUAACUAGUUACGCGACCCCCGAGCGGUCGGCGUCCAACUUCUUAGAGGGACAAGUGGCGUUCAGCCACCCGAGAUUGAGCAAUAACAGGUCUGUGAUGCCCUUAGAUGUCCGGGGCUGCACGCGCGCUACACUGACUGGCUCAGCUUGUGUCUACCCUACGCCGGCAGGCGCGGGUAACCCGUUGAACCCCAUUCGUGAUGGGGAUCGGGGAUUGCAAUUAUUCCCCAUGAACGAGGAAUUCCCAGUAAGUGCGGGUCAUAAGCUCGCGUUGAUUAAGUCCCUGCCCUUUGUACACACCGCCCGUCGCUACUACCGAUUGGAUGGUUUAGUGAGGUCCUCGGAUCGGCCCCGGCGGGGUCGGCCACGGCCCUGCCGGAGCGUCGAGAAGACGGUCGAACUUGACUAUCUAGAGGAAGUAAAAGUCGUAACAAGGUUUCNGUAGGUGAACCUGCGGAAGGAUCAUUA
Phe tRNA v 76 NA GCCGAAAUAGCUCAGUUGGGAGAGCGGGAGACUGAAGAUCCAAAGGUCCCUGGUUCGAUCCCGGGUCCCGGCACCA

Proteins
Molecule Chains Sequence Length Organism Sequence
Ribosomal protein eL33 BF 110 Caldanaerobius MSGRLWCKATFAGYKRGLRNQREHTALLKIEGVYARQETEFYLGKRCAYVYKAKNNTVTPGGKPNRTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI
60S ribosomal protein L34 BG 117 Caldanaerobius MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLKRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVLKAQAQSQKSK
Large ribosomal subunit protein uL29 BH 123 Caldanaerobius MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPVRKYAIKA
Large ribosomal subunit protein eL36 BI 105 Caldanaerobius MAIRYPMAVGLNKGYKVTKNVSKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRKAAAKKD
Ribosomal protein L37 BJ 97 Caldanaerobius MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKKVYRRFRNGFREGTTPKPKRAAVAASSSS
Large ribosomal subunit protein eL39 BL 51 Caldanaerobius MSSHKTFKIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL
Ubiquitin-60S ribosomal protein L40 BM 128 Caldanaerobius MQIFVKTLTGKTITLEVEPNDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK
Ribosomal protein L15 BN 204 Caldanaerobius MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR
Ribosomal protein L36a like BO 105 Caldanaerobius VNVPKTRRTYCKKCGKHQPHKVTQYKKGKDSLHAQGKRRYTRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF
Large ribosomal subunit protein eL43 BP 92 Caldanaerobius MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRKAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKELKDQ
Ribosomal protein eL18 BQ 187 Caldanaerobius GVDIRHNKDRKVRRREPKSQDIYLRLLVKLYRFLARRTNSAFNKVVLKRLFMSRTNRPPLALSRMTRKMKLPGRENKTAVVVGTVTDDVRIQEVPKLKVCALRVTKGARTRILRAGGSVLTFDQLAMAAPKGKGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGRRASRGYKN
60S ribosomal protein L28 BR 138 Caldanaerobius MSAHLQWMVVRNCSSFLIKRNHQTYSTEPNNLKSRNSFRYNGLIHRKTLGVEPAPDGKGVLVVLKKRSGQRKPAASYDRISIRRNARATLSSLRHLVRKNRYRPDLRMAALRRASAILRSQRPLLVRKKRARAAKAAQ
Large ribosomal subunit protein uL10 BS 316 Caldanaerobius MPREDRATWKSNYFMKIIQLLDDYPKCFVVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCDVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHKRFLEGVRNVASVCLQIGYPTIASVPHSIVNGYKRVLAVAVETDYTFPLAEKVKAFLADPSAFVAAAPVVVETAAPAAAAAPAKEAPKEESEESDEDMGFGLFD
60S ribosomal protein L12 BT 165 Caldanaerobius MPPKFDPTEVKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGSVSFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCSIDGRHPHDIIDDINSGAIECPAS
Large ribosomal subunit protein eL22 BU 128 Caldanaerobius MAPVKKPAAKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYFQINQDEEEEEEED
Ribosomal protein BV 217 Caldanaerobius MSSKVSRDTLYEAVKEVLQGSKTKKRKFVETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCLLGDQQHCDEAKAVEIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTEDELVYNIHLAINFLVSLLKKNWQNVRALYIKSTMGKPQRLY
Ribosomal protein L24 BW 157 Caldanaerobius MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAITGASLAEIMAKRNQKPEVRKAQREQAIRAAKEAKKAKQATKKTAVSAAKAPTKAAPKQKIVKPVKVSAPRVGGKR
Ribosomal protein uL23 BX 155 Caldanaerobius MAPKAKKEAVPPKTEAKAKALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII
Ribosomal protein L26 like 1 BY 145 Caldanaerobius MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKGKYKEETIEKMQE
Large ribosomal subunit protein eL27 BZ 136 Caldanaerobius MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF
60S ribosomal protein L8 BA 257 Caldanaerobius MGRVIRGQRKGAGSVFRAHVKHRKGPAKLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKIAFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGIVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQEKEN
Ribosomal protein uL3 BB 403 Caldanaerobius MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVQTPRGLRSFKTIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEEGKKQLEKDFNSMKKYCQVIRVMAHTQMRLLPLRQKKSHLMEIQVNGGTVAEKVDWAREKLEQQVPVSSVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTAEEKKSFMGPLKKDRIAKEEAA
60S ribosomal protein L4 C-terminal domain-containing protein BC 421 Caldanaerobius MACARPLISVYSEKGEASGKNVTLPAVFKAPIRPDVVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNVTQKRYAICSALAASALPALVMSKGHRIEEIPELPLVVEDKVESYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIRAFRNIPGITLLDVNKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKPATLKSDYNLPMHKMTNTDLGRILRSQEIQKALRAPKKKIHRRVLKKNPLKNLRVMIKLNPYAKTMRRNTILRHAQNQKLKEEKKAKAKASVTSKAKLSAKAQTKAKPASKTAGKAAAKGPAKAPAKAPAKSAAKAPAKSPAKAPAKGKAEA
Large ribosomal subunit protein uL18 BD 297 Caldanaerobius MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNKFGLDKIYEGQVEVTGDEYNVESVDGKPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNITPDGMEEMYKKAHAAIRDNPVHEKKPKREVKKKRVNSTKMSLAQKKDRVAQKKASFLRAQERAADS
60S ribosomal protein L6 BE 298 Caldanaerobius MAGEKKAGEKKAGEKKPAQKKVGEKKPADKKPVEKKAGQKKVREKIKKPKKYHASRNPVLARGIGKYSRSAMYARKALYKRKYTAPETKIEKKKKEKPRATIIKPVGGDKNGGSRVVKVRKMPRYYPTEDVPRKLLSHGKKPFSQHKRRLRASITPGTVLILLTGRHRGKRVVFLKQLGTGLLLVTGPLAVNRVPLRRAHQKFVIATSTKVDISGVKIPKHLTDAYFKKKKLRKPKHQEGEIFDTEKEKYEITEQRKTDQKAVDSQILARIKKVPQLRGYLRSTFSLSNGVYPHKLVF
Small ribosomal subunit protein uS2 AZ 296 Caldanaerobius XSGGLDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQTEWTAPAPEFTAPPQPEVADWSEGVQVPSVPIQQFPTEDWSAQPATEDWSAAPTAQATEWVGTTTEWS
60S ribosomal protein L38 BK 70 Caldanaerobius MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSLPPGLAVKELK
40S ribosomal protein S27 AA 84 Caldanaerobius MPLARDLLHPSLEEERRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTILCQPTGGKARLTEGCSFRRKQH
40S ribosomal protein S2 AB 264 Caldanaerobius MAVSRRMGPGRGRGRGRGRGARGGKAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHLAKTHTRVSVQRTQAAAVATT
DNA-(apurinic or apyrimidinic site) lyase AC 243 Caldanaerobius MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILPTTPISEQKGGKPEQPAMPQPVPTA
Ribosomal protein eS30 AD 133 Caldanaerobius MQLFVRAQTLHTIEVSSSETVAQIKERIAALESIAPEDQVLLFGGSPLEDGAVLERSGVPEFSTLEVAARLLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS
Ribosomal protein S5 AE 204 Caldanaerobius MTEWETAAPAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR
Small ribosomal subunit protein RACK1 AF 317 Caldanaerobius MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR
40S ribosomal protein S29 AG 171 Caldanaerobius RGRPLGIAHCSPELLGSSDPAGSASRVAGTTGVRHRARQRHRRSAATTALLTADVTPRREGERHALRTRCLPCSRACALCRVRAAPRCRAGGRAGLISACAGRHLPLTAGHAAGSMGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD
40S ribosomal protein S8 AH 207 Caldanaerobius GISRDNWHKRRKTGGKRKPYHKKRKYELGRPPANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLVDSTPYRQWYEAHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKIASILEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK
40S ribosomal protein S9 AI 194 Caldanaerobius MPVARSWVCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED
Ribosomal protein S10 AJ 165 Caldanaerobius MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELVDKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPPGADKKAEAGAGAATEFQFRGGFGRGRGQPPQ
40S ribosomal protein S11 AK 158 Caldanaerobius MADTQTERAYQKQPTIFQNKKRALLGEGGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKAAGTKKQFQKF
Small ribosomal subunit protein eS12 AL 132 Caldanaerobius MAEEGITAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFKCKK
Small ribosomal subunit protein uS15 AM 151 Caldanaerobius MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA
Ribosomal protein S14 AN 151 Caldanaerobius MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL
Small ribosomal subunit protein uS19 AO 145 Caldanaerobius MAEVEQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK
Small ribosomal subunit protein eS17 AQ 135 Caldanaerobius MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTVGMNFKTPRGAL
40S ribosomal protein S18 AR 152 Caldanaerobius MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK
Ribosomal protein eS19 AS 145 Caldanaerobius MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPDWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVLRSHFSRGSQSVARRVLQALEGLKMVEKEQDGGRKLTPQGQRDLDRIAGQVAAASKKH
40S ribosomal protein S20 AT 119 Caldanaerobius MAFKDTGKAPVEQEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA
Small ribosomal subunit protein eS21 AU 84 Caldanaerobius XMQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQINISEVDKVTGRVNGQFKTYAICGAIRRMGESDDSILRLAKNDGIVSKNF
40S ribosomal protein S15a AV 130 Caldanaerobius MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGYIVLTTSAGIMDHEEARRKHTGGKILGFFF
Ribosomal protein uS12 AW 143 Caldanaerobius MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPRS
40S ribosomal protein S24 AX 131 Caldanaerobius MNDTVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKANVGAGKKK
40S ribosomal protein S25 AY 125 Caldanaerobius MPPKDDKKKKDAGKSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLGKGLIKLVSKHRAQVIYTRNTKGGDAPAAGEDA
Ribosomal protein S16 AP 146 Caldanaerobius MPAKGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQAISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR
SERPINE1 mRNA binding protein 1 S 404 Caldanaerobius MCPAPEEKRVSSRPAILCGSEQGAGGPAASEQDPADGGPSCPDTCRRASAASSPTASTSSLMTSPTPSRCCGRPRVGGKRAAAAAGPRGAAGPEEGGGQPGAPLRKEGIRRIGRRPDQQQQQQQGEGKPIDRRPERRPPRERRFDKPADEKGEGGEFSVDKPILDRPMRGRGGLGRGRGRGRGMGRGDGFDSRGKREFDRHSGSDRSGLKHEDKRGGSGSHNWGTVKDELTELDQSAVTEETPEGEEHPPADSENKENEVEEVKEEGPKEMTLDEWKAIQSKDRAKVEFNIRKPNEGADGQWKKGFVLHKSKSEEAHAEDSVMDHHFRKPANDITSQLEINFGDLGRPGRGGRGGRGGRGRGGRASRGGRTDKLVKEFDVIHTPNQSSASAPDVDDPEAFPALS
Elongation factor 2 A 858 Caldanaerobius MVNFTVDQIRAIMDKKANIRNMSVIAHVDHGKSTLTDSLVCKAGIIASARAGETRFTDTRKDEQERCITIKSTAISLFYELSENDLAFIKQSKDGSGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLMMNKMDRALLELQLDPEELYQTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLKQFAEMYVAKFAAKGDAQMNPTERAKKVEDMMKKLWGDRYFDPATGKFSKSATGPDGKKLPRTFCQLILDPIFKVFDAIMTFKKEEAAKLIEKLDIKLDSEDKDKEGKPLLKAVMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPPDDEAAIGIKNCDPRGSLMMYISKMVPTSDKGRFYAFGRVFSGLVSTGLKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTITTFEHAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESNVMCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVTEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGVLCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYACVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDSASRPSQVVAETRKRKGLKEGIPALDNFLDKL
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-08-18
Deposition Author(s): Jenner, L. , Nurullina, L. , Yusupov, M.