8Q5I
Structure of candida albicans 80s ribosome in complex with cephaeline
PDB DOI: 10.2210/pdb8q5i/pdb
Classification: RIBOSOME Organism(s): Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2023-08-09 Deposition Author(s): Atamas, A. , Guskov, A. , Kolosova, O. , Stetsenko, A. , Yusupov, M. , Zgadzay, Y.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.45 Å
Structure of candida albicans 80s ribosome in complex with cephaeline
Atamas, A. , Guskov, A. , Kolosova, O. , Stetsenko, A. , Yusupov, M. , Zgadzay, Y.
Primary Citation of Related Structures: 8Q5I
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 25S rRNA | 1 | 3359 | NA | UGACCUCAAAUCAGGUAGGACUACCCGCUGAACUUAAGCAUAUCAAUAAGCGGAGGAAAAGAAACCAACAGGGAUUGCCUCAGUAGCGGCGAGUGAAGCGGCAAAAGCUCAAAUUUGAAAUCUGGCGUCUUUGGCGUCCGAGUUGUAAUUUGAAGAAGGUAUCUUUGGGCCCGGCUCUUGUCUAUGUUCCUUGGAACAGGACGUCACAGAGGGUGAGAAUCCCGUGCGAUGAGAUGACCCGGGUCUGUGUAAAGUUCCUUCGACGAGUCGAGUUGUUUGGGAAUGCAGCUCUAAGUGGGUGGUAAAUUCCAUCUAAAGCUAAAUAUUGGCGAGAGACCGAUAGCGAACAAGUACAGUGAUGGAAAGAUGAAAAGAACUUUGAAAAGAGAGUGAAAAAGUACGUGAAAUUGUUGAAAGGGAAGGGCUUGAGAUCAGACUUGGUAUUUUGCAUGCUGCUCUCUCGGGGGCGGCCGCUGCGGUUUACCGGGCCAGCAUCGGUUUGGAGCGGCAGGAUAAUGGCGGAGGAAUGUGGCACGGCUUCUGCUGUGUGUUAUAGCCUCUGACGAUACUGCCAGCCUAGACCGAGGACUGCGGUUUUUACCUAGGAUGUUGGCAUAAUGAUCUUAAGUCGCCCGUCUUGAAACACGGACCAAGGAGUCUAACGUCUAUGCGAGUGUUUGGGUGUAAAACCCGUACGCGUAAUGAAAGUGAACGAAGGUGGGGGCCCAUUAGGGUGCACCAUCGACCGAUCCUGAUGUGUUCGGAUGGAUUUGAGUAAGAGCAUAGCUGUUGGGACCCGAAAGAUGGUGAACUAUGCCUGAAUAGGGUGAAGCCAGAGGAAACUCUGGUGGAGGCUCGUAGCGGUUCUGACGUGCAAAUCGAUCGUCGAAUUUGGGUAUAGGGGCGAAAGACUAAUCGAACCAUCUAGUAGCUGGUUCCUGCCGAAGUUUCCCUCAGGAUAGCAGAAGCUCGUAUCAGUUUUAUGAGGUAAAGCGAAUGAUUAGAAGUCUUGGGGUUGAAAUGACCUUAACUUAUUCUCAAACUUUAAAUAUGUAAGAAGUCCUUGUUGCUUAAUUGAACGUGGACAAUUGAAUGAAGAGCUUUUAGUGGGCCAUUUUUGGUAAGCAGAACUGGCGAUGCGGGAUGAACCGAACGUGAAGUUAAAGUGCCGGAAUGCACGCUCAUCAGACACCACAAAAGGUGUUAGUUCAUCUAGACAGCCGGACGGUGGCCAUGGAAGUCGGAAUCCGCUAAGGAGUGUGUAACAACUCACCGGCCGAAUGAACUAGCCCUGAAAAUGGAUGGCGCUCAAGCGUGCUACUUAUACUUCACCGUGAUUGCUGUUUUGACGCUUUCACGAGUAGGCAGGCGUGGAGGUCAGUGACGAAGCCUUUGCUGUAAAGCUGGGUCGAACGGCCUCUAGUGCAGAUCUUGGUGGUAGUAGCAAAUAUUCAAAUGAGAACUUUGAAGACUGAAGUGGGGAAAGGUUCCAUGUCAACAGCAGUUGGACAUGGGUUAGUCGAUCCUAAGAGAUGGGGAAGCUCCGUUUCAACGUGCUUGAUUUUUCAGGCCAACCAUCGAAAGGGAAUCCGGUUAAAAUUCCGGAACUUGGAUAUGGAUUCUUCACGGCAACGUAACUGAAUGUGGAGACGUCGGCGUGAGCCCUGGGAGGAGUUAUCUUUUCUUCUUAACAGCUUAUCACCCUGGAAUUGGUUUAUCCGGAGAUGGGGUCUUAUGGCUGGAAGAGCGCGGUAAUUUUGCCGCGUCCGGUGCGCUUACGACGGUCCUUGAAAAUCCACAGGAAGGAAUAGUUUUCAUGCCAAGUCGUACUCAUAACCGCAGCAGGUCUCCAAGGUUAACAGCCUCUAGUUGAUAGAAUAAUGUAGAUAAGGGAAGUCGGCAAAAUAGAUCCGUAACUUCGGGAUAAGGAUUGGCUCUAAGGAUCGGGUGUCUUGGGCCUUGUGUAGACGCGGCGGUGACUGUUGGCGGGCUGUUUUACGACGGACUGCUGGUGGAUGCUGCUGUAGACACGCUUGGUAGGUCUUUAUGGCCGUCCGGGGCACGUUUAACGAUCAACUUAGAACUGGUACGGACAAGGGGAAUCUGACUGUCUAAUUAAAACAUAGCAUUGUGAUGGUCAGAAAGUGAUGUUGACACAAUGUGAUUUCUGCCCAGUGCUCUGAAUGUCAAAGUGAAGAAAUUCAACCAAGCGCGGGUAAACGGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUCUAAUUAGUGACGCGCAUGAAUGGAUUAACGAGAUUCCCACUGUCCCUAUCUACUAUCUAGCGAAACCACAGCCAAGGGAACGGGCUUGGCAGAAUCAGCGGGGAAAGAAGACCCUGUUGAGCUUGACUCUAGUUUGACAUUGUGAAAAGACAUGGAGGGUGUAGAAUAAGUGGGAGCUUCGGCGCCGGUGAAAUACCACUACCUCUAUAGUUUUUUUACUUAUUCAAUGAAGCGGAGCUGGAGGUCAAACUCCACGUUCUAGCAUUAAGCCCUCUGGGCGAUCCGGGUUGAAGACAUUGUCAGGUGGGGAGUUUGGCUGGGGCGGCACAUCUGUUAAACGAUAACGCAGGUGUCCUAAGGGGGACUCAUGGAGAACAGAAAUCUCCAGUAGAACAAAAGGGUAAAAGUCCCCUUGAUUUUGAUUUUCAGUGUGAAUACAAACCAUGAAAGUGUGGCCUAUCGAUCCUUUAGUCCCUCGGAAUUUGAGGCUAGAGGUGCCAGAAAAGUUACCACAGGGAUAACUGGCUUGUGGCAGUCAAGCGUUCAUAGCGACAUUGCUUUUUGAUUCUUCGAUGUCGGCUCUUCCUAUCAUACCGAAGCAGAAUUCGGUAAGCGUUGGAUUGUUCACCCACUAAUAGGGAACGUGAGCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACUGAUGAAUGUUAUCGCAAUAGUAAUUGAACUUAGUACGAGAGGAACCGUUCAUUCAGAUAAUUGGUUUUUGCGGCUGUCUGAUCAGGCAACGCCGCGAAGCUACCAUCUGCUGGAUUAUGGCUGAACGCCUCUAAGUCAGAAUCCAUGCUAGAACGCGAUGAUUUUUGCCCUGCACAUUUUAGAUGGAUACGAAUAAGACUUUUUAGUCGCUGGACCAUAGCAGGCUGGCAACGGUGCGCUUAGCGGAAAGGCUUUGUGCGCUUGCCGGCGGAUAGCAAUGUCAACAUGCGCGGGGAUAAAUCCUUUGCAUACGACUUAGAUGUACAACGGAGUAUUGUAAGCAGUAGAGUAGCCUUGUUGUUACGAUCUGCUGAGAUUAAGCUCUUGUUGUCUGAUUUGU |
| 5S | 3 | 121 | NA | GGUUGCGGCCAUAUCUAGCAGAAAGCACCGUUCCCCGUUCGAUCAACCGUAGUUAAGCUGCUAAGAGCAAUACCGAGUAGUGUAGUGGGAGACCAUACGCGAAACUAUUGUGCUGCAAUCU |
| 5.8S rRNA | 4 | 158 | NA | AAACUUUCAACAACGGAUCUCUUGGUUCUCGCAUCGAUGAAGAACGCAGCGAAAUGCGAUACGUAAUAUGAAUUGCAGAUAUUCGUGAAUCAUCGAAUCUUUGAACGCACAUUGCGCCCUCUGGUAUUCCGGAGGGCAUGCCUGUUUGAGCGUCGUUU |
| Mixture of endogenous E-tRNAs | 10 | 14 | NA | GGCAGCUGCUACCA |
| 18S ribosomal RNA | a | 1787 | NA | UAUCUGGUUGAUCCUGCCAGUAGUCAUAUGCUUGUCUCAAAGAUUAAGCCAUGCAUGUCUAAGUAUAAGCAAUUUAUACAGUGAAACUGCGAAUGGCUCAUUAAAUCAGUUAUCGUUUAUUUGAUAGUACCUUACUACUUGGAUAACCGUGGUAAUUCUAGAGCUAAUACAUGCUUAAAAUCCCGACUGUUUGGAAGGGAUGUAUUUAUUAGAUAAAAAAUCAAUGCCUUCGGGCUCUUUGAUGAUUCAUAAUAACUUUUCGAAUCGCAUGGCCUUGUGCUGGCGAUGGUUCAUUCAAAUUUCUGCCCUAUCAACUUUCGAUGGUAGGAUAGUGGCCUACCAUGGUUUCAACGGGUAACGGGGAAUAAGGGUUCGAUUCCGGAGAGGGAGCCUGAGAAACGGCUACCACAUCCAAGGAAGGCAGCAGGCGCGCAAAUUACCCAAUCCCGACACGGGGAGGUAGUGACAAUAAAUAACGAUACAGGGCCCUUUUGGGUCUUGUAAUUGGAAUGAGUACAAUGUAAAUACCUUAACGAGGAACAAUUGGAGGGCAAGUCUGGUGCCAGCAGCCGCGGUAAUUCCAGCUCCAAAAGCGUAUAUUAAAGUUGUUGCAGUUAAAAAGCUCGUAGUUGAACCUUGGGCUUGGCUGGCCGGUCCAUCUUUUUGAUGCGUACUGGACCCAGCCGAGCCUUUCCUUCUGGGUAGCCAUUUAUGGCGAACCAGGACUUUUACUUUGAAAAAAUUAGAGUGUUCAAAGCAGGCCUUUGCUCGAAUAUAUUAGCAUGGAAUAAUAGAAUAGGACGUUAUGGUUCUAUUUUGUUGGUUUCUAGGACCAUCGUAAUGAUUAAUAGGGACGGUCGGGGGUAUCAGUAUUCAGUUGUCAGAGGUGAAAUUCUUGGAUUUACUGAAGACUAACUACUGCGAAAGCAUUUACCAAGGACGUUUUCAUUAAUCAAGAACGAAAGUUAGGGGAUCGAAGAUGAUCAGAUACCGUCGUAGUCUUAACCAUAAACUAUGCCGACUAGGGAUCGGUUGUUGUUCUUUUAUUGACGCAAUCGGCACCUUACGAGAAAUCAAAGUCUUUGGGUUCUGGGGGGAGUAUGGUCGCAAGGCUGAAACUUAAAGGAAUUGACGGAAGGGCACCACCAGGAGUGGAGCCUGCGGCUUAAUUUGACUCAACACGGGGAAACUCACCAGGUCCAGACACAAUAAGGAUUGACAGAUUGAGAGCUCUUUCUUGAUUUUGUGGGUGGUGGUGCAUGGCCGUUCUUAGUUGGUGGAGUGAUUUGUCUGCUUAAUUGCGAUAACGAACGAGACCUUAACCUACUAAAUAGUGCUGCUAGCAUUUGCUGGUAUAGUCACUUCUUAGAGGGACUAUCGAUUUCAAGUCGAUGGAAGUUUGAGGCAAUAACAGGUCUGUGAUGCCCUUAGACGUUCUGGGCCGCACGCGCGCUACACUGACGGAGCCAGCGAGUAUAAGCCUUGGCCGAGAGGUCUGGGAAAUCUUGUGAAACUCCGUCGUGCUGGGGAUAGAGCAUUGUAAUUGUUGCUCUUCAACGAGGAAUUCCUAGUAAGCGCAAGUCAUCAGCUUGCGUUGAUUACGUCCCUGCCCUUUGUACACACCGCCCGUCGCUACUACCGAUUGAAUGGCUUAGUGAGGCCUCCGGAUUGGUUUAGGAAAGGGGGCAACCUCAUUCUGGAACCGAGAAGCUGGUCAAACUUGGUCAUUUAGAGGAAGUAAAAGUCGUAACAAGGUUUCCGUAGGUGAACCUGCGGAAGGAUCAUUA |
| DNA (5'-R(P*GP*GP*CP*AP*G)-3') | g | 5 | NA | GGCAG |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 40S ribosomal protein S13 | O | 151 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MGRMHSSGKGISSSALPYSRNAPSWFKLSSDDVVEQIIKYARKGLTPSQIGVILRDAHGVSQAKVVTGNKILRILKSNGLAPEIPEDLYYLIKKAVSVRKHLEKNRKDKDSKFRLILIESRIHRLARYYRTVAVLPPNWKYESATASALVA |
| 40S ribosomal protein S14-A | P | 132 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MSTDRSQVFGVARIFASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCKEVGITAVHIKLRATGGTKTKTPGPGGQSALRALARSGLRIGRIEDVTPVPSDSTRRKGGRRGRRL |
| 40S ribosomal protein S15 | Q | 142 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MVDATAPKKRTFKQFSFKGVDLKDLVEMPTEEFTKLCGARVRRRFSRGLDSKPMGLIKKLRAARAATEPNERPAVVKTHLRNMIVVPEMIGSVVGVYNGKVFNTVEIKPEMVGHYLGEFSITYTPVRHGRAGNASSKFMPLR |
| 40S ribosomal protein S16 | R | 142 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MSTQSVQTFGKKKTATAVAHVKAGKGLIKINGSPITLVQPEILRFKVYEPLTLVGLDKFQGIDIRVKVTGGGHVSQVYAIRQAIAKGLVAYHQKYVDEASKNELKKIFASYDKTLLVADSRRMEPKKFGGRGARARFQKSYR |
| 40S ribosomal protein S17-B | S | 137 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MGRVRTKTVKRASKVLIERFYPKLTLDFETNKRLTSEIAVIQSKRLRNKIAGYTTHLMKRIQKGPVRGISFKLQEEERERKDQYVPEVSALDLSHTNGQLEIDADTADLVKSLGFKIPVQTVSISAQRGPRRFAKRN |
| 40S ribosomal protein S18-B | T | 145 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MPLVVQEQGSFQHILRLLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNPTNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQHTKTTSRGR |
| 40S ribosomal protein S19-A | U | 145 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MPGVSVRDVPAQDFINAYAQFLQRQGKLEVPGYVDIVKTSAGNDLPPQEAETWFYKRAASIARHIYLRKQVGVGALNKLYGGAKNRGFRPHKHVDASGSINRKCVQALQKIGVLEISPKGGRRISENGQRDLDRIAAQTLEEDDE |
| Ribosomal protein S10 | V | 119 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MSAPINKEKVEQEAEQQIHKIRITLTSTKVKQLENVSANIIRNAAQYNIVKKGPVRMPTKVLKITTRKTPNGEGSKTWDAYEMRIHKRVIDLQAPASTVKRITQITIEPGVDVEVTIAA |
| 40S ribosomal protein S21 | W | 87 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MENDKGQLVELYVPRKCSATNRIIKAKDHASVQISIAKVDEDGRAIAGENITYALSGYVRGRGEADDSLNRLAQQDGLLKNVWSYSR |
| 40S ribosomal protein S22-A | X | 130 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLTVMQKHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGVIQPRFNVKINDIERWTDNLLPARQFGYVILTTSAGIMDHEEARRKHVSGKILGFVY |
| Ribosomal protein S23 (S12) | Y | 145 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MGKGKPRGLNSARKLRVHRRNNRWADQAYKARLLGTAFKSSPFGGSSHAKGIVLEKIGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRRGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS |
| 40S ribosomal protein S24 | Z | 135 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MSDAVTIRTRKVISNPLLARRQFVIDVLHPNRANVSKDELREKLAEIYKAEKDAVSVFGFRTQFGGGKSTGFGLIYQSVADAKRFEPAYRLVRYGLAEKVEKASRQQRKQKKNRDKKIFGTQRRAQKRAARRNAD |
| 60S ribosomal protein L20 | 0 | 172 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MSRLNEYQVIGRNLPTESVPEPKLFRMRIFAPNTVVAKSRYWYFLQKLHKVKKASGEIVSVNIISEAKPTKVKTFGIWLRYESRSGIHNMYKEYRDVTRVGAVETMYQDLAARHRARFRSIHILKVVELEKTDDVKRQYVKQFLTKDLKFPLPHRVQKSKKLFQATAPTTFY |
| 60S ribosomal protein L21-A | 2 | 160 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MGKSRGYRSGTRYAFQRDFKKHGAIPLSTYLKVYKVGDIVDIKANGSIQKGMPHKYYHGKTGIVYNVTKSSVGVIINKVVGNRYIEKRVNLRVEHVKHSACRQEFLNRVKSNAAKKREAKANGETVYLKRQAAKPRGSRIISTEGNIPQTLAPVAYETFI |
| 60S ribosomal protein L22-B | 5 | 124 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MAPVTSKKSKSVKKFVVDVAAPVENDVFDQESYVKYLVEHVKVDGIVGNLGNDISITAESDNKVVVVVSGNGSFSGKYLKYLTKKYLKKNQIRDWIRFVSVKQNQYKLQFYAVAEDDEEEEDEE |
| 60S ribosomal protein L23-A | 6 | 137 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MSGSGASGNKFRMSLALPVGAVMNCADNSGARNLYVLAVKGTGARLNRLPAAAAGDMVMATVKKGKPELRKKVMPAIVIRQSKPWRRRDGVYLYFEDNAGVIVNPKGEMKGSAITGPVAKECADLWPRIASNSGVVV |
| 60S ribosomal protein L24-A | 7 | 155 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MKIEVDSFSGSKIYPGRGTLFVRGDSKIFRFQSSKSASLFQQRKNPRRISWTVLYRRHHKKGISEEAAKKRTRKTVKHQRAIVGASLELIKERRSQKPSDRKAARDSKLAKDKEAKKAAKAARKAEKAKAVASGASVVSKQQAKGSFQKVKATSR |
| 60S ribosomal protein L25 | 8 | 142 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MAPTTKASAAKKAALKGVNGKKALKVRTSTTFRLPKTLKLTRSPKYQRKSVPHYNRLDAHKIIVAPIATETAMKKVEDGNTLVFQVDIKSNKHQIKSAVKELYDVDALYVNTLIRPNGTKKAYIRLTSDYDALDIANRIGYI |
| Ribosomal protein L24 | 9 | 127 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MAKISQDVSSSRSKARKAYFTASSVERRVLLSAPLSKELRQQYNVKSLPIRQNDEVLVVRGSKKGSEGKVNSVYRLKFAIQVDKLQKEKSNGASVPINIHPSKVVITKLHLDKDRKALIQRKGGKAE |
| 60S ribosomal protein L27 | AA | 136 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MAKFIKSGKVAIVVRGRYAGKKVVIVKPHDEGTKSHPFPHAIVAGIERAPLKVTKKMDAKKVTKRTKVKPFVKLVNYNHLMPTRYSLDVESFKSAVTSEALEEPSQREEAKKVVKKAFEEKHQAGKNKWFFQKLHF |
| 60S ribosomal protein L28 | AB | 149 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MPTRLTKTRKHRGNVSAGKGRIGKHRKHPGGRGKAGGQHHHRTNLDKYHPGYFGKVGMRYFHKQQNHFWRPEINLDKLWTLVDSEKKDEYLSKSSASAAPVIDTLAHGYGKVLGKGRLPEVPVIVKARFVSKLAEEKIRAVGGVVELVA |
| 60S ribosomal protein L29 | AC | 63 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MAKSKNHTAHNQTRKAHRNGIKKPKTYKYPSLKGVDAKFKRNHRYALHGTAKALAKARAEKSA |
| 60S ribosomal protein L30 | AD | 106 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MAPKSNKNQENINSKLALTIKSGKYTLGYKSVVKSLRTGKAKLVIIAANTPVLRKSELEYYAMLSKTPVYYFQGGNNELGTVCGKLFRVGTLSILDAGDSDILSSI |
| 60S ribosomal protein L31-B | AE | 112 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MALQDVVTREYTINLHKRLHGVNFKKRAPKAVKEIKKFATLHMGTTDVRLDPKLNIAIWKRGVQGVENRMRLRISRKRNDEEDAKEKLFAYVEPVIVPSTKGLQTVVVEDDE |
| 60S ribosomal protein L32 | AF | 131 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MATSVPHPKIVKKYTKKFKRHHSDRYHRVAENWRKQKGIDSCVRRRFRGTIPQPNIGYGSNKKTKFLNPAGYKVYLVKNVKDLDVLLLHTKSYAAEIASSVSSRKRVEIVAKAKKLGVKVTNPKGKLNLEA |
| 60S ribosomal protein L33-A | AG | 107 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MAESHRLYVKGKHISYQRSKSVTNPNVSLIQIEGVASPKDAKFYLGKRIAYVYRAPKEIRGSKIRVIWGKVTRTHGNNGLVRANFKKNLPPKTFGASVRIMLYPSNI |
| 60S ribosomal protein L34-B | AH | 122 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MAQRVTYRRRNPYNTRSNKIKVVKTPGGKLVAQHVKKAASRVKCGDCGSALAGISTLRPRQYAQVSKTHKTVQRAYGGSRCANCVKERIVRAFLIEEQKIVKRVLKEQQDKEKKAAKKTGKK |
| Ribosomal protein L29 | AI | 120 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MAGVKTFELRTKSKEQLESQLVELKQELATLKVQKLQRPSLPRIHTVRKNIARVLTVINLNQRENVRAFYAGKKYIPKDLRAKKTRALRRKLTKFEASQETEKARKQRIAFPQRKFAIKA |
| 60S ribosomal protein L36 | AJ | 99 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MAKSGIAAGVNKGRKTTAKEVAPKISYRKGASSQRTVFVRSIVKEVAGLAPYERRLIELIRNAGEKRAKKLAKKRLGTHKRALRKVEEMTQVIAESRRH |
| 60S ribosomal protein L37-B | AK | 90 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MGKGTPSLGKRHNKSHTLCNRCGRRSFHVQKKTCSSCGYPAAKMRSHNWALKAKRRRTTGTGRMAYLKHVTRRFKNGFQTGVAKAQTPSA |
| 60S ribosomal protein L38 | AL | 78 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MAREIKDIKEFVELARRSDIKSAIVKVNAKVNANGKKFKQTKFKVRGSRYQYTLVVNDASKAKKLQQSLPPTLKITNL |
| 60S ribosomal protein L39 | AM | 51 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MPSQKSFRTKQKLAKAQKQNRPLPQWIRLRTDNKIRYNAKRRHWRRTKLGI |
| 60S ribosomal protein L40-B | AN | 52 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MIEPSLKALASKYNCEKSICRKCYARLPPRATNCRKRKCGHTNQLRPKKKLK |
| 60S ribosomal protein L41 | AO | 25 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MRDKWRKKRVRRLKRKRRKVRARSK |
| 60S ribosomal protein L42-B | AP | 106 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MVNVPKTRKTYCKGKECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGYGGQTKQIFHKKAKTTKKVVLRLECVVCKTKAQLPLKRCKHFELGGDKKQKGQALQF |
| 60S ribosomal protein L43-A | AQ | 92 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MTKRTKKVGITGKFGVRYGSSLRRQTKKLEVQQHAKYDCSFCGKRTVQRGATGIWNCKSCKKTVAGGAYTVSTAAAATVRSTIRRLRELAEA |
| 40S ribosomal protein S26 | B | 119 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MPKKRASNGRNKKGRGHVKPVRCLNCARCVPKDKAIKRVTIRNMVEAAAVRDLSEASVYAEYALPKLYNKLHYCVSCAIHARIVRVRSRTDRKIRTPPQRKRFTSDRKVSPQDAAKKAN |
| 40S ribosomal protein S27 | C | 82 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MVLVQDLLHPSPATEAKQHKLKTLVQQPRSFFMDVKCQGCLNITTVFSHAQTAVTCDSCSTVLCTPTGGKAKLTEGCSFRRK |
| 40S ribosomal protein S28-B | D | 67 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MDAKTPVTLAKVIKVLGRTGSRGGVTQVRVEFLEDASRTIVRNVKGPVRENDILCLMESEREARRLR |
| 40S ribosomal protein S8 | J | 206 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MGISRDSRHKRSATGAKRAQFRKKRKFELGRQPANTKIGPKRIHSVRTRGGNQKFRALRVETGNFSWGSEGVSRKTRIAGVVYHPSNNELVRTNTLTKSAVVQIDATPFRQWYENHYGATLGKKKGGAHAAHAAEVADAKRSRKVERKLAARSGAAAIESAVDSQFGSGRLYAVISSRPGQSGRCDGYILEGEELAFYLRRLTAKK |
| 40S ribosomal protein S29A | E | 56 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MAHENVWFSHPRNFGKGSRQCRHCSSHSGLIRKYGLDLCRQCFREKAADIGFNKYR |
| 40S ribosomal protein S30 | F | 63 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MGKVHGSLARAGKVKSQTPKVEKQEKPKKPQGRAYMRLLYTRRFVNVTLTNGKRKMNPSPASQ |
| 40S ribosomal protein S6 | H | 236 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MKLNISYPANGTQKSIDIDDEHKLRVFYEKRMGQEVEGDSVGDEFKGYIFKITGGNDKQGFPMKQGVMHPTRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVAQDLSVLALSIVKQGDNEIEGLTDTTVPKRLGPKRANHIRKFFGLTKEDDVRDFVVRREVTKGDKTYTKAPKIQRLVTPQTLQRKRALKAKKVKNAQQQRDAAAEYAQLLAKRLHERKEERAEIKKKRAESLKN |
| 40S ribosomal protein S7 | I | 186 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MSSKILSENPTELELKVAQAFVDLESQADLKAELRPLQFKSIKEIDVNGGKKALAVFVPPPSLQAYRKVQTRLTRELEKKFPDRHVVFLAERRILPKPARKARKQQKRPRSRTLTAVHDKILEDLVFPTEIIGKRVRYLVGGNKIQKVLLDSKDSTAVDYKLDSFQQLYSKLTGKQVVFEIPGESH |
| 60S ribosomal protein L3 | K | 389 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDLDRPGSKMHKREVVEAATVVDTPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYKNWYKSKKKAFTKYSGKYATDAKQVETELARIKKYASVVRVLAHTQIKKTPLSQKKAHLAEIQINGGSVSDKVDWAKEHFEKEVSVDSVFEQDEMIDVIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGTDEANGATEFDRTKKTINPMGGFVRYGNVNNDFVLLKGSIPGVKKRVVTLRKSLYVDTSRRAVEKVNLKWIDTASRFGKGRFQTPAEKHAFMGTLKKDLEN |
| 60S ribosomal protein L4-B | L | 363 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MSSRPQVSVISVKGEQGSSQLPLPAVFAAPVRPDLVHSVFVRVNKNKRQAYAVAENAGHQTSAESWGTGRAVARIPRVGGGGTHRSGQAAFGNMCRGGRMFAPTKTWRRWNVKVNHNEKRYATASAIAASAVTSLVLARGHRVEQVKELPLVVSNEFESVTKTKDAVAVLKAVGAHKDVVKVIKSKKLRAGKGKLRGRRFTQRRGPLVVYAQDNGIVKALRNVPGVETASVKHLGLLQLAPGAHLGRFIIWTQGAFESLDSVYGSDSTKSIKSGYTLPSNIISNTDVTRLINSAEVQAVVRPAGEKTQKKSHVLKKNPLKNKQVLLRLNPYAKAYAAEKVGSAKVEQAKVKPSKGQFAEVLKN |
| 60S ribosomal protein L5 | M | 298 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MPMQKEFRTSAYHSRFQTPFRRRQEGKTDYYQRKRLVTQHKAKYNSPKYRLVVRFTNKDIIAQIVSAHITGDVVFTAAYAHELPRYGIKYGLTNWSAAYAVGLLVARRALQKLGLDETYTGVEEVEGEFELTEAVEDGPRPFKVFLDIGLQRTTTGARVFGVLKGASDGGLYVPHSPNRFPGWDIEAEELDAELLRKYIFGGHVAEYMEELLDDDEEKYKSIFKNYIEEEIESEDVEEIYANAHEAIRADPSFKPTEKKFTKEQYKAESKKYRQQKLTRAERQAKVAKKIAEFKAQQE |
| 60S ribosomal protein L6 | N | 176 | Ipomoea Batatas , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MSQVAPKWYQSEDVPAPKQTRKTARPQKLRASLVPGTVLILLAGRFRGKRVVYLKNLEDNTLLVSGPFKVNGVPLRRVNARYVIATSTKVNVSGVDVSKFNVEYFAREKSSKSKKSEAEFFNESQPKKEIKAERVADQKSVDAALLSEIKKTPLLKQYLAASFSLKNGDRPHLLKF |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2023-08-09 Deposition Author(s): Atamas, A. , Guskov, A. , Kolosova, O. , Stetsenko, A. , Yusupov, M. , Zgadzay, Y.