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8Q36

Structure of nucleosome core with a bound metallopeptide conjugate (foamy virus gag peptide-au[i] compound)

PDB DOI: 10.2210/pdb8q36/pdb

Classification: DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2023-08-03
Deposition Author(s): Batchelor, L.K. , Davey, C.A. , De Falco, L. , Dyson, P.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.604 Å

8q36
Literature

Structure of nucleosome core with a bound metallopeptide conjugate (foamy virus gag peptide-au[i] compound)

Batchelor, L.K. , Davey, C.A. , De Falco, L. , Dyson, P.J.

Primary Citation of Related Structures: 8Q36


Proteins
Molecule Chains Sequence Length Organism Sequence
GAG structural protein MMM 18 Homo Sapiens , Synthetic Construct GGYNLRPRTYQPQRYGGG
Histone H3.1 AAA 98 Homo Sapiens , Synthetic Construct PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H3.1 EEE 98 Homo Sapiens , Synthetic Construct PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H4 BBB 87 Homo Sapiens , Synthetic Construct KRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H4 FFF 87 Homo Sapiens , Synthetic Construct KRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A type 1-B/E CCC 107 Homo Sapiens , Synthetic Construct KAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
Histone H2A type 1-B/E GGG 107 Homo Sapiens , Synthetic Construct KAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
Histone H2B type 1-K DDD 95 Homo Sapiens , Synthetic Construct RSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Histone H2B type 1-K HHH 95 Homo Sapiens , Synthetic Construct RSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (145-MER) iii 145 NA ATCAATATCCACCTGCAGATACTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCTGAATCAGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGTATCTGCAGGTGGATATTGAT
DNA (145-MER) jjj 145 NA ATCAATATCCACCTGCAGATACTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCTGATTCAGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGTATCTGCAGGTGGATATTGAT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2023-08-03
Deposition Author(s): Batchelor, L.K. , Davey, C.A. , De Falco, L. , Dyson, P.J.