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FASTA Sequence PDB Format mmCIF Format
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8PO8

Structure of escherichia coli hrpa in complex with adp and oligonucleotide poly(dc)11 forming an i-motif

PDB DOI: 10.2210/pdb8po8/pdb

Classification: HYDROLASE
Organism(s): Escherichia Coli K-12 , Synthetic Construct

Deposited: 2023-07-03
Deposition Author(s): Ai, X. , Li, H.H. , Liu, N.N. , Rety, S. , Xi, X.G. , Xie, S.M. , Xin, B.G. , Yuan, L.G. , Zhang, L.L.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.52 Å

8po8
Literature

Structure of escherichia coli hrpa in complex with adp and oligonucleotide poly(dc)11 forming an i-motif

Ai, X. , Li, H.H. , Liu, N.N. , Rety, S. , Xi, X.G. , Xie, S.M. , Xin, B.G. , Yuan, L.G. , Zhang, L.L.

Primary Citation of Related Structures: 8PO8


Proteins
Molecule Chains Sequence Length Organism Sequence
ATP-dependent RNA helicase HrpA A 758 Escherichia Coli K-12 , Synthetic Construct MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSNHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGD
ATP-dependent RNA helicase HrpA B 758 Escherichia Coli K-12 , Synthetic Construct MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSNHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGD

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*C)-3') c 11 NA CCCCCCCCCCC
DNA (5'-D(P*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*C)-3') d 11 NA CCCCCCCCCCC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2023-07-03
Deposition Author(s): Ai, X. , Li, H.H. , Liu, N.N. , Rety, S. , Xi, X.G. , Xie, S.M. , Xin, B.G. , Yuan, L.G. , Zhang, L.L.