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8PM4

Cryo-em structure of the cas12m-crrna-target dna complex

PDB DOI: 10.2210/pdb8pm4/pdb

Classification: RNA BINDING PROTEIN
Organism(s): Aspergillus Nidulans Fgsc A4 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2023-06-28
Deposition Author(s): Bigelyte, G. , Karvelis, T. , Sasnauskas, G. , Siksnys, V. , Tamulaitiene, G.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.93 Å

8pm4
Literature

Cryo-em structure of the cas12m-crrna-target dna complex

Bigelyte, G. , Karvelis, T. , Sasnauskas, G. , Siksnys, V. , Tamulaitiene, G.

Primary Citation of Related Structures: 8PM4


Proteins
Molecule Chains Sequence Length Organism Sequence
Transposase A 614 Aspergillus Nidulans Fgsc A4 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SNAGGGGMTRVTVQTAGVHYKWQMPDQLTQQLRLAHDLREDLVTLEYEYEDAVKAVWSSYPAVAALEAQVAELDERASELASTVKEEKSRQRTKRPSHPAVAQLAETRAQLKAAKASRREAIASVRDEATERLRTISDERYAAQKQLYRDYCTDGLLYWATFNAVLDHHKTAVKRIAAHRKQGRAAQLRHHRWDGTGTISVQLQRQATDPARTPAIIADADTGKWRSSLIVPWVNPDVWDTMDRASRRKAGRVVIRMRCGSSRNPDGTKTSEWIDVPVQQHRMLPADADITAAQLTVRREGADLRATIGITAKIPDQGEVDEGPTIAVHLGWRSSDHGTVVATWRSTEPLDIPETLRGVITTQSAERTVGSIVVPHRIEQRVHHHATVASHRDLAVDSIRDTLVAWLTEHGPQPHPYDGDPITAASVQRWKAPRRFAWLALQWRDTPPPEGADIAETLEAWRRADKKLWLESEHGRGRALRHRTDLHRQVAAYFAGVAGRIVVDDSDIAQIAGTAKHSELLTDVDRQIARRRAIAAPGMLRAAIVAAATRDEVPTTTVSHTGLSRVHAACGHENPADDRYLMQPVLCDGCGRTYDTDLSATILMLQRASAATSN

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
crRNA, chain B b 58 NA GGGUGUCAACGCCAGCGCGGAGGCGUCAAAUCCGCGACAGUUGACCCAACGUCGCCGG
DNA oligoduplex, target strand, chain C c 44 NA CCGGCGACGTTGGGTCAACTGAAATGTCTGTTTCTCAACAAAAA
DNA oligoduplex, non-target strand, chain D d 44 NA CCGGCGACGTTGGGTCAACTGAAACAGACATTTCTCAACAAAAA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-06-28
Deposition Author(s): Bigelyte, G. , Karvelis, T. , Sasnauskas, G. , Siksnys, V. , Tamulaitiene, G.