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8PM4
Cryo-em structure of the cas12m-crrna-target dna complex
PDB DOI: 10.2210/pdb8pm4/pdb
Classification: RNA BINDING PROTEIN Organism(s): Gordonia Otitidis Nbrc 100426 , Synthetic Construct
Deposited: 2023-06-28 Deposition Author(s): Bigelyte, G. , Karvelis, T. , Sasnauskas, G. , Siksnys, V. , Tamulaitiene, G.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.93 Å
Cryo-em structure of the cas12m-crrna-target dna complex
Bigelyte, G. , Karvelis, T. , Sasnauskas, G. , Siksnys, V. , Tamulaitiene, G.
Primary Citation of Related Structures: 8PM4
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Transposase | A | 614 | Gordonia Otitidis Nbrc 100426 , Synthetic Construct | SNAGGGGMTRVTVQTAGVHYKWQMPDQLTQQLRLAHDLREDLVTLEYEYEDAVKAVWSSYPAVAALEAQVAELDERASELASTVKEEKSRQRTKRPSHPAVAQLAETRAQLKAAKASRREAIASVRDEATERLRTISDERYAAQKQLYRDYCTDGLLYWATFNAVLDHHKTAVKRIAAHRKQGRAAQLRHHRWDGTGTISVQLQRQATDPARTPAIIADADTGKWRSSLIVPWVNPDVWDTMDRASRRKAGRVVIRMRCGSSRNPDGTKTSEWIDVPVQQHRMLPADADITAAQLTVRREGADLRATIGITAKIPDQGEVDEGPTIAVHLGWRSSDHGTVVATWRSTEPLDIPETLRGVITTQSAERTVGSIVVPHRIEQRVHHHATVASHRDLAVDSIRDTLVAWLTEHGPQPHPYDGDPITAASVQRWKAPRRFAWLALQWRDTPPPEGADIAETLEAWRRADKKLWLESEHGRGRALRHRTDLHRQVAAYFAGVAGRIVVDDSDIAQIAGTAKHSELLTDVDRQIARRRAIAAPGMLRAAIVAAATRDEVPTTTVSHTGLSRVHAACGHENPADDRYLMQPVLCDGCGRTYDTDLSATILMLQRASAATSN |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| crRNA, chain B | b | 58 | NA | GGGUGUCAACGCCAGCGCGGAGGCGUCAAAUCCGCGACAGUUGACCCAACGUCGCCGG |
| DNA oligoduplex, target strand, chain C | c | 44 | NA | CCGGCGACGTTGGGTCAACTGAAATGTCTGTTTCTCAACAAAAA |
| DNA oligoduplex, non-target strand, chain D | d | 44 | NA | CCGGCGACGTTGGGTCAACTGAAACAGACATTTCTCAACAAAAA |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2023-06-28 Deposition Author(s): Bigelyte, G. , Karvelis, T. , Sasnauskas, G. , Siksnys, V. , Tamulaitiene, G.