8PJ9
Cas9 bound to cognate dna, streptococcus thermophilus dgcc 7710 crispr3 system
PDB DOI: 10.2210/pdb8pj9/pdb
Classification: RNA BINDING PROTEIN Organism(s): Streptococcus Thermophilus Dgcc 7710 , Synthetic Construct
Deposited: 2023-06-23 Deposition Author(s): Gaizauskaite, U. , Sasnauskas, G. , Tamulaitiene, G.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.24 Å
Cas9 bound to cognate dna, streptococcus thermophilus dgcc 7710 crispr3 system
Gaizauskaite, U. , Sasnauskas, G. , Tamulaitiene, G.
Primary Citation of Related Structures: 8PJ9
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| CRISPR-associated endonuclease Cas9 | A | 1397 | Streptococcus Thermophilus Dgcc 7710 , Synthetic Construct | MTKPYSIGLDIGTNSVGWAVITDNYKVPSKKMKVLGNTSKKYIKKNLLGVLLFDSGITAEGRRLKRTARRRYTRRRNRILYLQEIFSTEMATLDDAFFQRLDDSFLVPDDKRDSKYPIFGNLVEEKVYHDEFPTIYHLRKYLADSTKKADLRLVYLALAHMIKYRGHFLIEGEFNSKNNDIQKNFQDFLDTYNAIFESDLSLENSKQLEEIVKDKISKLEKKDRILKLFPGEKNSGIFSEFLKLIVGNQADFRKCFNLDEKASLHFSKESYDEDLETLLGYIGDDYSDVFLKAKKLYDAILLSGFLTVTDNETEAPLSSAMIKRYNEHKEDLALLKEYIRNISLKTYNEVFKDDTKNGYAGYIDGKTNQEDFYVYLKNLLAEFEGADYFLEKIDREDFLRKQRTFDNGSIPYQIHLQEMRAILDKQAKFYPFLAKNKERIEKILTFRIPYYVGPLARGNSDFAWSIRKRNEKITPWNFEDVIDKESSAEAFINRMTSFDLYLPEEKVLPKHSLLYETFNVYNELTKVRFIAESMRDYQFLDSKQKKDIVRLYFKDKRKVTDKDIIEYLHAIYGYDGIELKGIEKQFNSSLSTYHDLLNIINDKEFLDDSSNEAIIEEIIHTLTIFEDREMIKQRLSKFENIFDKSVLKKLSRRHYTGWGKLSAKLINGIRDEKSGNTILDYLIDDGISNRNFMQLIHDDALSFKKKIQKAQIIGDEDKGNIKEVVKSLPGSPAIKKGILQSIKIVDELVKVMGGRKPESIVVEMARENQYTNQGKSNSQQRLKRLEKSLKELGSKILKENIPAKLSKIDNNALQNDRLYLYYLQNGKDMYTGDDLDIDRLSNYDIDHIIPQAFLKDNSIDNKVLVSSASNRGKSDDFPSLEVVKKRKTFWYQLLKSKLISQRKFDNLTKAERGGLLPEDKAGFIQRQLVETRQITKHVARLLDEKFNNKKDENNRAVRTVKIITLKSTLVSQFRKDFELYKVREINDFHHAHDAYLNAVIASALLKKYPKLEPEFVYGDYPKYNSFRERKSATEKVYFYSNIMNIFKKSISLADGRVIERPLIEVNEETGESVWNKESDLATVRRVLSYPQVNVVKKVEEQNHGLDRGKPKGLFNANLSSKPKPNSNENLVGAKEYLDPKKYGGYAGISNSFAVLVKGTIEKGAKKKITNVLEFQGISILDRINYRKDKLNFLLEKGYKDIELIIELPKYSLFELSDGSRRMLASILSTNNKRGEIHKGNQIFLSQKFVKLLYHAKRISNTINENHRKYVENHKKEFEELFYYILEFNENYVGAKKNGKLLNSAFQSWQNHSIDELCSSFIGPTGSERKGLFELTSRGSAADFEFLGVKIPRYRDYTPSSLLKDATLIHQSVTGLYETRIDLAKLGEGLEGHHHHHH |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| crRNA, chain B | b | 42 | NA | CGCUAAAGAGGAAGAGGACAGUUUUAGAGCUGUGUUGUUUCG |
| tracrRNA, chain C | c | 75 | NA | CGAAACAACACAGCGAGUUAAAAUAAGGCUUAGUCCGUACUCAACUUGAAAAGGUGGCACCGAUUCGGUGUUUUU |
| DNA oligoduplex, target strand, chains D,E | d | 32 | NA | GCTGACTCACCATGTCCTCTTCCTCTTTAGCG |
| DNA oligoduplex, target strand, chains D,E | e | 32 | NA | GCTGACTCACCATGTCCTCTTCCTCTTTAGCG |
| DNA oligoduplex, non-target strand, chain F | f | 12 | NA | TGGTGAGTCAGC |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2023-06-23 Deposition Author(s): Gaizauskaite, U. , Sasnauskas, G. , Tamulaitiene, G.