8PBZ
Sub-tomogram average of the nap adhesion complex from the human pathogen mycoplasma genitalium at 11 angstrom.
PDB DOI: 10.2210/pdb8pbz/pdb
Classification: CELL ADHESION Organism(s): Mycoplasmoides Genitalium G37
Deposited: 2023-06-09 Deposition Author(s): Frangakis, A.F. , Scheffer, M.P. , Sprankel, L.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 11.0 Å
Sub-tomogram average of the nap adhesion complex from the human pathogen mycoplasma genitalium at 11 angstrom.
Frangakis, A.F. , Scheffer, M.P. , Sprankel, L.
Primary Citation of Related Structures: 8PBZ
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Mgp-operon protein 3 | A | 1053 | Mycoplasmoides Genitalium G37 | MKTMRKQIYKKAYWLLLPFLPLALANTFLVKEDSKNVTAYTPFATPITDSKSDLVSLAQLDSSYQIADQTIHNTNLFVLFKSRDVKVKYESSGSNNISFDSTSQGEKPSYVVEFTNSTNIGIKWTMVKKYQLDVPNVSSDMNQVLKNLILEQPLTKYTLNSSLAKEKGKTQREVHLGSGQANQWTSQRNQHDLNNNPSPNASTGFKLTTGNAYRKLSESWPIYEPIDGTKQGKGKDSSGWSSTEENEAKNDAPSVSGGGSSSGTFNKYLNTKQALESIGILFDDQTPRNVITQLYYASTSKLAVTNNHIVVMGNSFLPSMWYWVVERSAQENASNKPTWFANTNLDWGEDKQKQFVENQLGYKETTSTNSHNFHSKSFTQPAYLISGIDSVNDQIIFSGFKAGSVGYDSSSSSSSSSSSSTKDQALAWSTTTSLDSKTGYKDLVTNDTGLNGPINGSFSIQDTFSFVVPYSGNHTNNGTTGPIKTAYPVKKDQKSTVKINSLINATPLNSYGDEGIGVFDALGLNYNFKSNQERLPSRTDQIFVYGIVSPNELRSAKSSADSTGSDTKVNWSNTQSRYLPVPYNYSEGIIDADGFKRPENRGASVTTFSGLKSIAPDGFANSIANFSVGLKAGIDPNPVMSGKKANYGAVVLTRGGVVRLNFNPGNDSLLSTTDNNIAPISFSFTPFTAAESAVDLTTFKEVTYNQESGLWSYIFDSSLKPSHDGKQTPVTDNMGFSVITVSRTGIELNQDQATTTLDVAPSALAVQSGIQSTTQTLTGVLPLSEEFSAVIAKDSDQNKIDIYKNNNGLFEIDTQLSNSVATNNGGLAPSYTENRVDAWGKVEFADNSVLQARNLVDKTVDEIINTPEILNSFFRFTPAFEDQKATLVATKQSDTSLSVSPRIQFLDGNFYDLNSTIAGVPLNIGFPSRVFAGFAALPAWVIPVSVGSSVGILFILLVLGLGIGIPMYRVRKLQDASFVNVFKKVDTLTTAVGSVYKKIITQTGVVKKAPSALKAANPSVKKPAAFLKPPVQPPSKPEGEQKAVEVKSEETKS |
| Mgp-operon protein 3 | D | 1053 | Mycoplasmoides Genitalium G37 | MKTMRKQIYKKAYWLLLPFLPLALANTFLVKEDSKNVTAYTPFATPITDSKSDLVSLAQLDSSYQIADQTIHNTNLFVLFKSRDVKVKYESSGSNNISFDSTSQGEKPSYVVEFTNSTNIGIKWTMVKKYQLDVPNVSSDMNQVLKNLILEQPLTKYTLNSSLAKEKGKTQREVHLGSGQANQWTSQRNQHDLNNNPSPNASTGFKLTTGNAYRKLSESWPIYEPIDGTKQGKGKDSSGWSSTEENEAKNDAPSVSGGGSSSGTFNKYLNTKQALESIGILFDDQTPRNVITQLYYASTSKLAVTNNHIVVMGNSFLPSMWYWVVERSAQENASNKPTWFANTNLDWGEDKQKQFVENQLGYKETTSTNSHNFHSKSFTQPAYLISGIDSVNDQIIFSGFKAGSVGYDSSSSSSSSSSSSTKDQALAWSTTTSLDSKTGYKDLVTNDTGLNGPINGSFSIQDTFSFVVPYSGNHTNNGTTGPIKTAYPVKKDQKSTVKINSLINATPLNSYGDEGIGVFDALGLNYNFKSNQERLPSRTDQIFVYGIVSPNELRSAKSSADSTGSDTKVNWSNTQSRYLPVPYNYSEGIIDADGFKRPENRGASVTTFSGLKSIAPDGFANSIANFSVGLKAGIDPNPVMSGKKANYGAVVLTRGGVVRLNFNPGNDSLLSTTDNNIAPISFSFTPFTAAESAVDLTTFKEVTYNQESGLWSYIFDSSLKPSHDGKQTPVTDNMGFSVITVSRTGIELNQDQATTTLDVAPSALAVQSGIQSTTQTLTGVLPLSEEFSAVIAKDSDQNKIDIYKNNNGLFEIDTQLSNSVATNNGGLAPSYTENRVDAWGKVEFADNSVLQARNLVDKTVDEIINTPEILNSFFRFTPAFEDQKATLVATKQSDTSLSVSPRIQFLDGNFYDLNSTIAGVPLNIGFPSRVFAGFAALPAWVIPVSVGSSVGILFILLVLGLGIGIPMYRVRKLQDASFVNVFKKVDTLTTAVGSVYKKIITQTGVVKKAPSALKAANPSVKKPAAFLKPPVQPPSKPEGEQKAVEVKSEETKS |
| Adhesin P1 | B | 1444 | Mycoplasmoides Genitalium G37 | MHQPKKRLAKKSWAFLTAALTLGVITGVGGYFLFNQNKQRSSVSNFAYQPKQLSVKHQQAVDETLTPWTWNNNNFSSLKITGENPGSFGLVRSQNDNLNISSVTKNSSDDNLKYLNAVEKYLDGQQNFAIRRYDNNGRALYDINLAKMENPSTVQRGLNGEPIFDPFKGFGLTGNAPTDWNEIKGKVPVEVVQSPHSPNLYFVLLVPKVALEYHNLNNQVVKESLEVKATQSSFNPTQRLQKDSPVKDSSKQGEKLSETTASSMSSGMATSTRAKALKVEVERGSQSDSLLKNDFAKKPLKHKNSSGEVKLEAEKEFTEAWKPLLTTDQIAREKGMGATVVSFYDAPYSENHTAFGLVDHIDPKKMVENYPPSWKTPKWNHHGIWDYNARNLLLQTTGFFNPRRHPEWFDEGQAKADNTSPGFKVGDTDHKKDGFKKNSSSPIALPFEAYFANIGNMVAIGNSVFIFGGNGHATKMFTTNPLSIGVFRIKYTDNFSKSSVTGWPYAVLFGGLINPQTNGLKDLPLGTNRWFEYVPRMAVSGVKWVGNQLVLAGTLTMGDTATVPRLKYDQLEKHLNLVAQGQGLLREDLQIFTPYGWANRPDIPVGAWLQDEMGSKFGPHYFLNNPDIQDNVNNDTVEALISSYKNTDKLKHVYPYRYSGLYAWQLFNWSNKLTNTPLSANFVNENSYAPNSLFAAILNEDLLTGLSDKIFYGKENEFAENEADRFNQLLSLNPNPNTNWARYLNVVQRFTTGPNLDSSTFDQFLDFLPWIGNGKPFSNSPSPSTSASSSTPLPTFSNINVGVKSMITQHLNKENTRWVFIPNFSPDIWTGAGYRVQSANQKNGIPFEQVKPSNNSTPFDPNSDDNKVTPSGGSSKPTTYPALPNSISPTSDWINALTFTNKNNPQRNQLLLRSLLGTIPVLINKSGDSNDQFNKDSEQKWDKTETNEGNLPGFGEVNGLYNAALLHTYGFFGTNTNSTDPKIGFKADSSSSSSSTLVGSGLNWTSQDVGNLVVINDTSFGFQLGGWFITFTDFIRPRTGYLGITLSSLQDQTIIWADQPWTSFKGSYLDSDGTPKSLWDPTALKSLPNSSTTYDTNPTLSPSFQLYQPNKVKAYQTTNTYNKLIEPVDATSAATNMTSLLKLLTTKNIKAKLGKGTASSQGNNNGGGVSQTINTITTTGNISEGLKEETSIQAETLKKFFDSKQNNKSEIGIGDSTFTKMDGKLTGVVSTPLVNLINGQGATSDSDTEKISFKPGNQIDFNRLFTLPVTELFDPNTMFVYDQYVPLLVNLPSGFDQASIRLKVISYSVENQTLGVRLEFKDPQTQQFIPVLNASSTGPQTVFQPFNQWADYVLPLIVTVPIVVIILSVTLGLTIGIPMHRNKKALQAGFDLSNKKVDVLTKAVGSVFKEIINRTGISNAPKKLKQATPTKPTPKTPPKPPVKQ |
| Adhesin P1 | E | 1444 | Mycoplasmoides Genitalium G37 | MHQPKKRLAKKSWAFLTAALTLGVITGVGGYFLFNQNKQRSSVSNFAYQPKQLSVKHQQAVDETLTPWTWNNNNFSSLKITGENPGSFGLVRSQNDNLNISSVTKNSSDDNLKYLNAVEKYLDGQQNFAIRRYDNNGRALYDINLAKMENPSTVQRGLNGEPIFDPFKGFGLTGNAPTDWNEIKGKVPVEVVQSPHSPNLYFVLLVPKVALEYHNLNNQVVKESLEVKATQSSFNPTQRLQKDSPVKDSSKQGEKLSETTASSMSSGMATSTRAKALKVEVERGSQSDSLLKNDFAKKPLKHKNSSGEVKLEAEKEFTEAWKPLLTTDQIAREKGMGATVVSFYDAPYSENHTAFGLVDHIDPKKMVENYPPSWKTPKWNHHGIWDYNARNLLLQTTGFFNPRRHPEWFDEGQAKADNTSPGFKVGDTDHKKDGFKKNSSSPIALPFEAYFANIGNMVAIGNSVFIFGGNGHATKMFTTNPLSIGVFRIKYTDNFSKSSVTGWPYAVLFGGLINPQTNGLKDLPLGTNRWFEYVPRMAVSGVKWVGNQLVLAGTLTMGDTATVPRLKYDQLEKHLNLVAQGQGLLREDLQIFTPYGWANRPDIPVGAWLQDEMGSKFGPHYFLNNPDIQDNVNNDTVEALISSYKNTDKLKHVYPYRYSGLYAWQLFNWSNKLTNTPLSANFVNENSYAPNSLFAAILNEDLLTGLSDKIFYGKENEFAENEADRFNQLLSLNPNPNTNWARYLNVVQRFTTGPNLDSSTFDQFLDFLPWIGNGKPFSNSPSPSTSASSSTPLPTFSNINVGVKSMITQHLNKENTRWVFIPNFSPDIWTGAGYRVQSANQKNGIPFEQVKPSNNSTPFDPNSDDNKVTPSGGSSKPTTYPALPNSISPTSDWINALTFTNKNNPQRNQLLLRSLLGTIPVLINKSGDSNDQFNKDSEQKWDKTETNEGNLPGFGEVNGLYNAALLHTYGFFGTNTNSTDPKIGFKADSSSSSSSTLVGSGLNWTSQDVGNLVVINDTSFGFQLGGWFITFTDFIRPRTGYLGITLSSLQDQTIIWADQPWTSFKGSYLDSDGTPKSLWDPTALKSLPNSSTTYDTNPTLSPSFQLYQPNKVKAYQTTNTYNKLIEPVDATSAATNMTSLLKLLTTKNIKAKLGKGTASSQGNNNGGGVSQTINTITTTGNISEGLKEETSIQAETLKKFFDSKQNNKSEIGIGDSTFTKMDGKLTGVVSTPLVNLINGQGATSDSDTEKISFKPGNQIDFNRLFTLPVTELFDPNTMFVYDQYVPLLVNLPSGFDQASIRLKVISYSVENQTLGVRLEFKDPQTQQFIPVLNASSTGPQTVFQPFNQWADYVLPLIVTVPIVVIILSVTLGLTIGIPMHRNKKALQAGFDLSNKKVDVLTKAVGSVFKEIINRTGISNAPKKLKQATPTKPTPKTPPKPPVKQ |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2023-06-09 Deposition Author(s): Frangakis, A.F. , Scheffer, M.P. , Sprankel, L.