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FASTA Sequence PDB Format mmCIF Format
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8OX0

Structure of apo telomeric nucleosome

PDB DOI: 10.2210/pdb8ox0/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Homo Sapiens

Deposited: 2023-04-28
Deposition Author(s): Ahsan, B. , Ghanim, G.E. , Hu, H. , Nguyen, T.H.D. , Oluwole, A. , Peak-Chew, S. , Robinson, C.V. , Van Roon, A.M.M.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.52 Å

Literature

Structure of apo telomeric nucleosome

Ahsan, B. , Ghanim, G.E. , Hu, H. , Nguyen, T.H.D. , Oluwole, A. , Peak-Chew, S. , Robinson, C.V. , Van Roon, A.M.M.

Primary Citation of Related Structures: 8OX0


Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3.1 A 140 Homo Sapiens GPRGMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H3.1 E 140 Homo Sapiens GPRGMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H4 B 107 Homo Sapiens GPRGMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H4 F 107 Homo Sapiens GPRGMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A type 1-C C 134 Homo Sapiens GPRGMSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHKAKGK
Histone H2A type 1-C G 134 Homo Sapiens GPRGMSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHKAKGK
Histone H2B type 1-C/E/F/G/I D 130 Homo Sapiens GPRGMPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK
Histone H2B type 1-C/E/F/G/I H 130 Homo Sapiens GPRGMPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
Telomeric DNA G strand j 145 NA ATCTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTGAT
Telomeric DNA C strand i 145 NA ATCACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAAGAT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-04-28
Deposition Author(s): Ahsan, B. , Ghanim, G.E. , Hu, H. , Nguyen, T.H.D. , Oluwole, A. , Peak-Chew, S. , Robinson, C.V. , Van Roon, A.M.M.