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8OWT

Sars-cov-2 spike rbd with a8 and h3 nanobodies bound

PDB DOI: 10.2210/pdb8owt/pdb

Classification: VIRAL PROTEIN
Organism(s): Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2

Deposited: 2023-04-28
Deposition Author(s): Mikolajek, H. , Naismith, J.H. , Owens, R.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.37 Å

8owt
Literature

Sars-cov-2 spike rbd with a8 and h3 nanobodies bound

Mikolajek, H. , Naismith, J.H. , Owens, R.J.

Primary Citation of Related Structures: 8OWT


Proteins
Molecule Chains Sequence Length Organism Sequence
Nanobody A8 AAA 132 Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 QVQLVESGGGLVQAGGSLRLSCAASGGTFSTAAMGWFRQAPGEERECVASIGWRGVRTWYADSVKGRFTISRDNPQNTVYLQMNNLKSGDTAVYYCAASVGNYGLPWAHFEYDFWGQGIQVTVSSKHHHHHH
Nanobody A8 DDD 132 Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 QVQLVESGGGLVQAGGSLRLSCAASGGTFSTAAMGWFRQAPGEERECVASIGWRGVRTWYADSVKGRFTISRDNPQNTVYLQMNNLKSGDTAVYYCAASVGNYGLPWAHFEYDFWGQGIQVTVSSKHHHHHH
Spike protein S1 BBB 210 Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 PNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNKHHHHHH
Spike protein S1 EEE 210 Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 PNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNKHHHHHH
Nanobody H3 CCC 136 Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 MAQVQLVESGGGLVKTGGSLRLSCAASGRTFSTYSMGWFRQAPGKEREFVAGMRWTGSSTFYSDSVKGRFTVSRNNAKDTVYLHMNSLKPEDTAVYYCAITTIVRAYYTEYTEADFGSWGQGTQVTVSSKHHHHHH
Nanobody H3 FFF 136 Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 MAQVQLVESGGGLVKTGGSLRLSCAASGRTFSTYSMGWFRQAPGKEREFVAGMRWTGSSTFYSDSVKGRFTVSRNNAKDTVYLHMNSLKPEDTAVYYCAITTIVRAYYTEYTEADFGSWGQGTQVTVSSKHHHHHH
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2023-04-28
Deposition Author(s): Mikolajek, H. , Naismith, J.H. , Owens, R.J.