Sars-cov-2 spike rbd with a8 and h3 nanobodies bound
PDB DOI: 10.2210/pdb8owt/pdb
Classification: VIRAL PROTEIN Organism(s): Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2
Deposited: 2023-04-28 Deposition Author(s): Mikolajek, H. , Naismith, J.H. , Owens, R.J.
Sars-cov-2 spike rbd with a8 and h3 nanobodies bound
Mikolajek, H. , Naismith, J.H. , Owens, R.J.
Primary Citation of Related Structures: 8OWT
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Nanobody A8 | AAA | 132 | Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 | QVQLVESGGGLVQAGGSLRLSCAASGGTFSTAAMGWFRQAPGEERECVASIGWRGVRTWYADSVKGRFTISRDNPQNTVYLQMNNLKSGDTAVYYCAASVGNYGLPWAHFEYDFWGQGIQVTVSSKHHHHHH |
Nanobody A8 | DDD | 132 | Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 | QVQLVESGGGLVQAGGSLRLSCAASGGTFSTAAMGWFRQAPGEERECVASIGWRGVRTWYADSVKGRFTISRDNPQNTVYLQMNNLKSGDTAVYYCAASVGNYGLPWAHFEYDFWGQGIQVTVSSKHHHHHH |
Spike protein S1 | BBB | 210 | Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 | PNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNKHHHHHH |
Spike protein S1 | EEE | 210 | Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 | PNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNKHHHHHH |
Nanobody H3 | CCC | 136 | Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 | MAQVQLVESGGGLVKTGGSLRLSCAASGRTFSTYSMGWFRQAPGKEREFVAGMRWTGSSTFYSDSVKGRFTVSRNNAKDTVYLHMNSLKPEDTAVYYCAITTIVRAYYTEYTEADFGSWGQGTQVTVSSKHHHHHH |
Nanobody H3 | FFF | 136 | Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 | MAQVQLVESGGGLVKTGGSLRLSCAASGRTFSTYSMGWFRQAPGKEREFVAGMRWTGSSTFYSDSVKGRFTVSRNNAKDTVYLHMNSLKPEDTAVYYCAITTIVRAYYTEYTEADFGSWGQGTQVTVSSKHHHHHH |
Method: X-RAY DIFFRACTION
Deposited Date: 2023-04-28 Deposition Author(s): Mikolajek, H. , Naismith, J.H. , Owens, R.J.