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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8ONH

Variant surface glycoprotein vsg11wt-oil

PDB DOI: 10.2210/pdb8onh/pdb

Classification: MEMBRANE PROTEIN
Organism(s): Trypanosoma Brucei Brucei

Deposited: 2023-04-03
Deposition Author(s): Foti, K. , Gkeka, A. , Stebbins, C.E. , Vlachou, E.P. , Zeelen, J.P.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.59 Å

8onh
Literature

Variant surface glycoprotein vsg11wt-oil

Foti, K. , Gkeka, A. , Stebbins, C.E. , Vlachou, E.P. , Zeelen, J.P.

Primary Citation of Related Structures: 8ONH


Proteins
Molecule Chains Sequence Length Organism Sequence
Variant surface glycoprotein A 410 Trypanosoma Brucei Brucei MTSSVLAALLSVSIMLVQLRAEANIGTGDNVLHRAALCGIIELAGKRAKLETALPNFQNELNSILELNMTAAEPTWLDQFRDKDDRSKPRDLTKQPLPKDTNWADHWTAWAKAALPLLNDETHQAKLKEYKLAGLQPEKLERARNTIRRLTAEAVAKAQDPTVAESTADLTTEEDLQKQINQAVYSKDTEPDDDFNGYTAFEGKASTNRQTICGSAVAGSKATNAMDALFCVCADDRTNGADAGKACVAGTAPGTGWNPGVTATPTGTMLQKVRKLCNTHGKTTLSAAAIEGRLTAVGNLLTRGSATSILGSFLATDCSGDQGSGMCVAYTEVTDAKGTPTKDIPWMQKLDSVRIKLQKHERAVEKLGKPQHDLKTILTLAKDPAYLQLASVGTRHLETTKQRVSNEQGK
Variant surface glycoprotein B 410 Trypanosoma Brucei Brucei MTSSVLAALLSVSIMLVQLRAEANIGTGDNVLHRAALCGIIELAGKRAKLETALPNFQNELNSILELNMTAAEPTWLDQFRDKDDRSKPRDLTKQPLPKDTNWADHWTAWAKAALPLLNDETHQAKLKEYKLAGLQPEKLERARNTIRRLTAEAVAKAQDPTVAESTADLTTEEDLQKQINQAVYSKDTEPDDDFNGYTAFEGKASTNRQTICGSAVAGSKATNAMDALFCVCADDRTNGADAGKACVAGTAPGTGWNPGVTATPTGTMLQKVRKLCNTHGKTTLSAAAIEGRLTAVGNLLTRGSATSILGSFLATDCSGDQGSGMCVAYTEVTDAKGTPTKDIPWMQKLDSVRIKLQKHERAVEKLGKPQHDLKTILTLAKDPAYLQLASVGTRHLETTKQRVSNEQGK
Variant surface glycoprotein C 410 Trypanosoma Brucei Brucei MTSSVLAALLSVSIMLVQLRAEANIGTGDNVLHRAALCGIIELAGKRAKLETALPNFQNELNSILELNMTAAEPTWLDQFRDKDDRSKPRDLTKQPLPKDTNWADHWTAWAKAALPLLNDETHQAKLKEYKLAGLQPEKLERARNTIRRLTAEAVAKAQDPTVAESTADLTTEEDLQKQINQAVYSKDTEPDDDFNGYTAFEGKASTNRQTICGSAVAGSKATNAMDALFCVCADDRTNGADAGKACVAGTAPGTGWNPGVTATPTGTMLQKVRKLCNTHGKTTLSAAAIEGRLTAVGNLLTRGSATSILGSFLATDCSGDQGSGMCVAYTEVTDAKGTPTKDIPWMQKLDSVRIKLQKHERAVEKLGKPQHDLKTILTLAKDPAYLQLASVGTRHLETTKQRVSNEQGK
Variant surface glycoprotein D 410 Trypanosoma Brucei Brucei MTSSVLAALLSVSIMLVQLRAEANIGTGDNVLHRAALCGIIELAGKRAKLETALPNFQNELNSILELNMTAAEPTWLDQFRDKDDRSKPRDLTKQPLPKDTNWADHWTAWAKAALPLLNDETHQAKLKEYKLAGLQPEKLERARNTIRRLTAEAVAKAQDPTVAESTADLTTEEDLQKQINQAVYSKDTEPDDDFNGYTAFEGKASTNRQTICGSAVAGSKATNAMDALFCVCADDRTNGADAGKACVAGTAPGTGWNPGVTATPTGTMLQKVRKLCNTHGKTTLSAAAIEGRLTAVGNLLTRGSATSILGSFLATDCSGDQGSGMCVAYTEVTDAKGTPTKDIPWMQKLDSVRIKLQKHERAVEKLGKPQHDLKTILTLAKDPAYLQLASVGTRHLETTKQRVSNEQGK
Variant surface glycoprotein E 410 Trypanosoma Brucei Brucei MTSSVLAALLSVSIMLVQLRAEANIGTGDNVLHRAALCGIIELAGKRAKLETALPNFQNELNSILELNMTAAEPTWLDQFRDKDDRSKPRDLTKQPLPKDTNWADHWTAWAKAALPLLNDETHQAKLKEYKLAGLQPEKLERARNTIRRLTAEAVAKAQDPTVAESTADLTTEEDLQKQINQAVYSKDTEPDDDFNGYTAFEGKASTNRQTICGSAVAGSKATNAMDALFCVCADDRTNGADAGKACVAGTAPGTGWNPGVTATPTGTMLQKVRKLCNTHGKTTLSAAAIEGRLTAVGNLLTRGSATSILGSFLATDCSGDQGSGMCVAYTEVTDAKGTPTKDIPWMQKLDSVRIKLQKHERAVEKLGKPQHDLKTILTLAKDPAYLQLASVGTRHLETTKQRVSNEQGK
Variant surface glycoprotein F 410 Trypanosoma Brucei Brucei MTSSVLAALLSVSIMLVQLRAEANIGTGDNVLHRAALCGIIELAGKRAKLETALPNFQNELNSILELNMTAAEPTWLDQFRDKDDRSKPRDLTKQPLPKDTNWADHWTAWAKAALPLLNDETHQAKLKEYKLAGLQPEKLERARNTIRRLTAEAVAKAQDPTVAESTADLTTEEDLQKQINQAVYSKDTEPDDDFNGYTAFEGKASTNRQTICGSAVAGSKATNAMDALFCVCADDRTNGADAGKACVAGTAPGTGWNPGVTATPTGTMLQKVRKLCNTHGKTTLSAAAIEGRLTAVGNLLTRGSATSILGSFLATDCSGDQGSGMCVAYTEVTDAKGTPTKDIPWMQKLDSVRIKLQKHERAVEKLGKPQHDLKTILTLAKDPAYLQLASVGTRHLETTKQRVSNEQGK
Variant surface glycoprotein G 410 Trypanosoma Brucei Brucei MTSSVLAALLSVSIMLVQLRAEANIGTGDNVLHRAALCGIIELAGKRAKLETALPNFQNELNSILELNMTAAEPTWLDQFRDKDDRSKPRDLTKQPLPKDTNWADHWTAWAKAALPLLNDETHQAKLKEYKLAGLQPEKLERARNTIRRLTAEAVAKAQDPTVAESTADLTTEEDLQKQINQAVYSKDTEPDDDFNGYTAFEGKASTNRQTICGSAVAGSKATNAMDALFCVCADDRTNGADAGKACVAGTAPGTGWNPGVTATPTGTMLQKVRKLCNTHGKTTLSAAAIEGRLTAVGNLLTRGSATSILGSFLATDCSGDQGSGMCVAYTEVTDAKGTPTKDIPWMQKLDSVRIKLQKHERAVEKLGKPQHDLKTILTLAKDPAYLQLASVGTRHLETTKQRVSNEQGK
Variant surface glycoprotein H 410 Trypanosoma Brucei Brucei MTSSVLAALLSVSIMLVQLRAEANIGTGDNVLHRAALCGIIELAGKRAKLETALPNFQNELNSILELNMTAAEPTWLDQFRDKDDRSKPRDLTKQPLPKDTNWADHWTAWAKAALPLLNDETHQAKLKEYKLAGLQPEKLERARNTIRRLTAEAVAKAQDPTVAESTADLTTEEDLQKQINQAVYSKDTEPDDDFNGYTAFEGKASTNRQTICGSAVAGSKATNAMDALFCVCADDRTNGADAGKACVAGTAPGTGWNPGVTATPTGTMLQKVRKLCNTHGKTTLSAAAIEGRLTAVGNLLTRGSATSILGSFLATDCSGDQGSGMCVAYTEVTDAKGTPTKDIPWMQKLDSVRIKLQKHERAVEKLGKPQHDLKTILTLAKDPAYLQLASVGTRHLETTKQRVSNEQGK
Variant surface glycoprotein I 410 Trypanosoma Brucei Brucei MTSSVLAALLSVSIMLVQLRAEANIGTGDNVLHRAALCGIIELAGKRAKLETALPNFQNELNSILELNMTAAEPTWLDQFRDKDDRSKPRDLTKQPLPKDTNWADHWTAWAKAALPLLNDETHQAKLKEYKLAGLQPEKLERARNTIRRLTAEAVAKAQDPTVAESTADLTTEEDLQKQINQAVYSKDTEPDDDFNGYTAFEGKASTNRQTICGSAVAGSKATNAMDALFCVCADDRTNGADAGKACVAGTAPGTGWNPGVTATPTGTMLQKVRKLCNTHGKTTLSAAAIEGRLTAVGNLLTRGSATSILGSFLATDCSGDQGSGMCVAYTEVTDAKGTPTKDIPWMQKLDSVRIKLQKHERAVEKLGKPQHDLKTILTLAKDPAYLQLASVGTRHLETTKQRVSNEQGK
Variant surface glycoprotein J 410 Trypanosoma Brucei Brucei MTSSVLAALLSVSIMLVQLRAEANIGTGDNVLHRAALCGIIELAGKRAKLETALPNFQNELNSILELNMTAAEPTWLDQFRDKDDRSKPRDLTKQPLPKDTNWADHWTAWAKAALPLLNDETHQAKLKEYKLAGLQPEKLERARNTIRRLTAEAVAKAQDPTVAESTADLTTEEDLQKQINQAVYSKDTEPDDDFNGYTAFEGKASTNRQTICGSAVAGSKATNAMDALFCVCADDRTNGADAGKACVAGTAPGTGWNPGVTATPTGTMLQKVRKLCNTHGKTTLSAAAIEGRLTAVGNLLTRGSATSILGSFLATDCSGDQGSGMCVAYTEVTDAKGTPTKDIPWMQKLDSVRIKLQKHERAVEKLGKPQHDLKTILTLAKDPAYLQLASVGTRHLETTKQRVSNEQGK
Variant surface glycoprotein K 410 Trypanosoma Brucei Brucei MTSSVLAALLSVSIMLVQLRAEANIGTGDNVLHRAALCGIIELAGKRAKLETALPNFQNELNSILELNMTAAEPTWLDQFRDKDDRSKPRDLTKQPLPKDTNWADHWTAWAKAALPLLNDETHQAKLKEYKLAGLQPEKLERARNTIRRLTAEAVAKAQDPTVAESTADLTTEEDLQKQINQAVYSKDTEPDDDFNGYTAFEGKASTNRQTICGSAVAGSKATNAMDALFCVCADDRTNGADAGKACVAGTAPGTGWNPGVTATPTGTMLQKVRKLCNTHGKTTLSAAAIEGRLTAVGNLLTRGSATSILGSFLATDCSGDQGSGMCVAYTEVTDAKGTPTKDIPWMQKLDSVRIKLQKHERAVEKLGKPQHDLKTILTLAKDPAYLQLASVGTRHLETTKQRVSNEQGK
Variant surface glycoprotein L 410 Trypanosoma Brucei Brucei MTSSVLAALLSVSIMLVQLRAEANIGTGDNVLHRAALCGIIELAGKRAKLETALPNFQNELNSILELNMTAAEPTWLDQFRDKDDRSKPRDLTKQPLPKDTNWADHWTAWAKAALPLLNDETHQAKLKEYKLAGLQPEKLERARNTIRRLTAEAVAKAQDPTVAESTADLTTEEDLQKQINQAVYSKDTEPDDDFNGYTAFEGKASTNRQTICGSAVAGSKATNAMDALFCVCADDRTNGADAGKACVAGTAPGTGWNPGVTATPTGTMLQKVRKLCNTHGKTTLSAAAIEGRLTAVGNLLTRGSATSILGSFLATDCSGDQGSGMCVAYTEVTDAKGTPTKDIPWMQKLDSVRIKLQKHERAVEKLGKPQHDLKTILTLAKDPAYLQLASVGTRHLETTKQRVSNEQGK
Variant surface glycoprotein M 410 Trypanosoma Brucei Brucei MTSSVLAALLSVSIMLVQLRAEANIGTGDNVLHRAALCGIIELAGKRAKLETALPNFQNELNSILELNMTAAEPTWLDQFRDKDDRSKPRDLTKQPLPKDTNWADHWTAWAKAALPLLNDETHQAKLKEYKLAGLQPEKLERARNTIRRLTAEAVAKAQDPTVAESTADLTTEEDLQKQINQAVYSKDTEPDDDFNGYTAFEGKASTNRQTICGSAVAGSKATNAMDALFCVCADDRTNGADAGKACVAGTAPGTGWNPGVTATPTGTMLQKVRKLCNTHGKTTLSAAAIEGRLTAVGNLLTRGSATSILGSFLATDCSGDQGSGMCVAYTEVTDAKGTPTKDIPWMQKLDSVRIKLQKHERAVEKLGKPQHDLKTILTLAKDPAYLQLASVGTRHLETTKQRVSNEQGK
Variant surface glycoprotein N 410 Trypanosoma Brucei Brucei MTSSVLAALLSVSIMLVQLRAEANIGTGDNVLHRAALCGIIELAGKRAKLETALPNFQNELNSILELNMTAAEPTWLDQFRDKDDRSKPRDLTKQPLPKDTNWADHWTAWAKAALPLLNDETHQAKLKEYKLAGLQPEKLERARNTIRRLTAEAVAKAQDPTVAESTADLTTEEDLQKQINQAVYSKDTEPDDDFNGYTAFEGKASTNRQTICGSAVAGSKATNAMDALFCVCADDRTNGADAGKACVAGTAPGTGWNPGVTATPTGTMLQKVRKLCNTHGKTTLSAAAIEGRLTAVGNLLTRGSATSILGSFLATDCSGDQGSGMCVAYTEVTDAKGTPTKDIPWMQKLDSVRIKLQKHERAVEKLGKPQHDLKTILTLAKDPAYLQLASVGTRHLETTKQRVSNEQGK
Variant surface glycoprotein O 410 Trypanosoma Brucei Brucei MTSSVLAALLSVSIMLVQLRAEANIGTGDNVLHRAALCGIIELAGKRAKLETALPNFQNELNSILELNMTAAEPTWLDQFRDKDDRSKPRDLTKQPLPKDTNWADHWTAWAKAALPLLNDETHQAKLKEYKLAGLQPEKLERARNTIRRLTAEAVAKAQDPTVAESTADLTTEEDLQKQINQAVYSKDTEPDDDFNGYTAFEGKASTNRQTICGSAVAGSKATNAMDALFCVCADDRTNGADAGKACVAGTAPGTGWNPGVTATPTGTMLQKVRKLCNTHGKTTLSAAAIEGRLTAVGNLLTRGSATSILGSFLATDCSGDQGSGMCVAYTEVTDAKGTPTKDIPWMQKLDSVRIKLQKHERAVEKLGKPQHDLKTILTLAKDPAYLQLASVGTRHLETTKQRVSNEQGK
Variant surface glycoprotein P 410 Trypanosoma Brucei Brucei MTSSVLAALLSVSIMLVQLRAEANIGTGDNVLHRAALCGIIELAGKRAKLETALPNFQNELNSILELNMTAAEPTWLDQFRDKDDRSKPRDLTKQPLPKDTNWADHWTAWAKAALPLLNDETHQAKLKEYKLAGLQPEKLERARNTIRRLTAEAVAKAQDPTVAESTADLTTEEDLQKQINQAVYSKDTEPDDDFNGYTAFEGKASTNRQTICGSAVAGSKATNAMDALFCVCADDRTNGADAGKACVAGTAPGTGWNPGVTATPTGTMLQKVRKLCNTHGKTTLSAAAIEGRLTAVGNLLTRGSATSILGSFLATDCSGDQGSGMCVAYTEVTDAKGTPTKDIPWMQKLDSVRIKLQKHERAVEKLGKPQHDLKTILTLAKDPAYLQLASVGTRHLETTKQRVSNEQGK
Variant surface glycoprotein Q 410 Trypanosoma Brucei Brucei MTSSVLAALLSVSIMLVQLRAEANIGTGDNVLHRAALCGIIELAGKRAKLETALPNFQNELNSILELNMTAAEPTWLDQFRDKDDRSKPRDLTKQPLPKDTNWADHWTAWAKAALPLLNDETHQAKLKEYKLAGLQPEKLERARNTIRRLTAEAVAKAQDPTVAESTADLTTEEDLQKQINQAVYSKDTEPDDDFNGYTAFEGKASTNRQTICGSAVAGSKATNAMDALFCVCADDRTNGADAGKACVAGTAPGTGWNPGVTATPTGTMLQKVRKLCNTHGKTTLSAAAIEGRLTAVGNLLTRGSATSILGSFLATDCSGDQGSGMCVAYTEVTDAKGTPTKDIPWMQKLDSVRIKLQKHERAVEKLGKPQHDLKTILTLAKDPAYLQLASVGTRHLETTKQRVSNEQGK
Variant surface glycoprotein R 410 Trypanosoma Brucei Brucei MTSSVLAALLSVSIMLVQLRAEANIGTGDNVLHRAALCGIIELAGKRAKLETALPNFQNELNSILELNMTAAEPTWLDQFRDKDDRSKPRDLTKQPLPKDTNWADHWTAWAKAALPLLNDETHQAKLKEYKLAGLQPEKLERARNTIRRLTAEAVAKAQDPTVAESTADLTTEEDLQKQINQAVYSKDTEPDDDFNGYTAFEGKASTNRQTICGSAVAGSKATNAMDALFCVCADDRTNGADAGKACVAGTAPGTGWNPGVTATPTGTMLQKVRKLCNTHGKTTLSAAAIEGRLTAVGNLLTRGSATSILGSFLATDCSGDQGSGMCVAYTEVTDAKGTPTKDIPWMQKLDSVRIKLQKHERAVEKLGKPQHDLKTILTLAKDPAYLQLASVGTRHLETTKQRVSNEQGK
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2023-04-03
Deposition Author(s): Foti, K. , Gkeka, A. , Stebbins, C.E. , Vlachou, E.P. , Zeelen, J.P.