8OIX
Cryoem structure of 20s trichomonas vaginalis proteasome in complex with proteasome inhibitor salinosporamid a
PDB DOI: 10.2210/pdb8oix/pdb
Classification: HYDROLASE Organism(s): Trichomonas Vaginalis G3
Deposited: 2023-03-23 Deposition Author(s): Boura, E. , Fajtova, P. , Silhan, J.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.89 Å
Cryoem structure of 20s trichomonas vaginalis proteasome in complex with proteasome inhibitor salinosporamid a
Boura, E. , Fajtova, P. , Silhan, J.
Primary Citation of Related Structures: 8OIX
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Proteasome subunit beta | A | 224 | Trichomonas Vaginalis G3 | MEGEFRENKKGQWSPYEMHGGTAIGICGDDYVVIGADTRLSVDYSIDSRHKARIFKMNSNCMISATGFDGDIDAFITRMRSILLNYENQHFHEMSVESVARCVSNTLYSKRFFPYYINILVGGINSEGKGKLYGYDPVGTIEDLHYDSNGSGSSLAAPLLDSAFGTIHHNTRPFPAVSLQDAKNIVRDAICSVTERDIYTGDALQLCVFTKDGFAQEEFPLPRH |
| Family T1, proteasome alpha subunit, threonine peptidase | O | 241 | Trichomonas Vaginalis G3 | MSSGADRYLTVFSAEGRLWQVEYSFKAVKQAEVTAVAVKSKNAVCVAVQKKVSDKLIDPSTVTHMYRITDNVGACLVGLPSDVNFIVMLLRSFANNFEYKQGFSIPVSILAQMLSERHQLESQLVYVRPSAVSAILFGLDGPSDSFALYKIEPSGYSNGFRAVACGVKEIEAMSALEKKMEDFETPEATAEFTLSTLQTVCGVDFEAQDVEVSLLTRDNSKFSKLPNDKVNEILHAVAEKD |
| Proteasome subunit beta | J | 206 | Trichomonas Vaginalis G3 | MSDISTYNGSCVLAMAGDHCVAIASDRRLGVNMLTVSKDFKRIFQINDRIYLGLAGLATDVLTVREQLRFDVNLLELREERPIDPKKFMNLVKSTLYEKRFSPFFVTPVIAGLLPETNEPYLAASDSIGAFAFPKDFAVAGTCEESLYGICESAWRPNMNPDELFECTAKCLIAAVERDSISGWGGIVYIITQDKVIIKEIKTRMD |
| Proteasome subunit beta | X | 206 | Trichomonas Vaginalis G3 | MSDISTYNGSCVLAMAGDHCVAIASDRRLGVNMLTVSKDFKRIFQINDRIYLGLAGLATDVLTVREQLRFDVNLLELREERPIDPKKFMNLVKSTLYEKRFSPFFVTPVIAGLLPETNEPYLAASDSIGAFAFPKDFAVAGTCEESLYGICESAWRPNMNPDELFECTAKCLIAAVERDSISGWGGIVYIITQDKVIIKEIKTRMD |
| Proteasome subunit beta | K | 191 | Trichomonas Vaginalis G3 | MLSIVGLQGPDWVLIAADSSVSSSIICMSENYDRIAQLDDRHALAMSGETGDCLQLSEYLQGNVALYKFRNGVELSSDALAHFIRHTMAKAVRKSPYEVNMLLSGYDGKPHLYFMDYLGTLQSIPYGAQGYCQYFVMSVFDKHYKEGLTLEDGKELMKLALNQIKQRFTVAPHGFIVKLVDKNGITKIDLE |
| Proteasome subunit beta | Y | 191 | Trichomonas Vaginalis G3 | MLSIVGLQGPDWVLIAADSSVSSSIICMSENYDRIAQLDDRHALAMSGETGDCLQLSEYLQGNVALYKFRNGVELSSDALAHFIRHTMAKAVRKSPYEVNMLLSGYDGKPHLYFMDYLGTLQSIPYGAQGYCQYFVMSVFDKHYKEGLTLEDGKELMKLALNQIKQRFTVAPHGFIVKLVDKNGITKIDLE |
| Proteasome subunit beta | L | 203 | Trichomonas Vaginalis G3 | TTTLSFIYNGGIVVAVDSRATGGQFIFSQTVMKILPLAPNMIGTMAGGAADCQYWLRNLSRLIQLHKFRYQQPLTVAAASKILVNELYRYKGYNLSIGSMICGYDNTGPHIFYIDNHGSRIAGKRFSVGSGSTHAYGVLDTCYREDMTKEEACELGRRAIYHATYRDSGSGGRVSVVHITQNGVEWIDKTDVFDMHDFSKTTF |
| Proteasome subunit beta | Z | 203 | Trichomonas Vaginalis G3 | TTTLSFIYNGGIVVAVDSRATGGQFIFSQTVMKILPLAPNMIGTMAGGAADCQYWLRNLSRLIQLHKFRYQQPLTVAAASKILVNELYRYKGYNLSIGSMICGYDNTGPHIFYIDNHGSRIAGKRFSVGSGSTHAYGVLDTCYREDMTKEEACELGRRAIYHATYRDSGSGGRVSVVHITQNGVEWIDKTDVFDMHDFSKTTF |
| Proteasome subunit beta | M | 224 | Trichomonas Vaginalis G3 | MEGEFRENKKGQWSPYEMHGGTAIGICGDDYVVIGADTRLSVDYSIDSRHKARIFKMNSNCMISATGFDGDIDAFITRMRSILLNYENQHFHEMSVESVARCVSNTLYSKRFFPYYINILVGGINSEGKGKLYGYDPVGTIEDLHYDSNGSGSSLAAPLLDSAFGTIHHNTRPFPAVSLQDAKNIVRDAICSVTERDIYTGDALQLCVFTKDGFAQEEFPLPRH |
| Family T1, proteasome beta subunit, threonine peptidase | N | 244 | Trichomonas Vaginalis G3 | MQVITASGAIVAAKYDGGILLASDLSITYGSMFRHNNVSHFVEVAPNIIIGASGEFADFQTLIEVIKSVILQQQCKHNGEYLTASEVHNYIKRYMYQCRSNMKPLSCKVIVAGINPDGSKFLACTDPYGASWESDHIGTGFGKYLQGLQIADVVNGSFDDVKKGITEVFRAVNARNTTANGKIEFITVTPQGINHLAPEQIDPNWEVVEGTWDQSAWSHPQFEKGGGSGGGSGGSAWSHPQFEK |
| Family T1, proteasome alpha subunit, threonine peptidase | B | 232 | Trichomonas Vaginalis G3 | MGDSDFSLTTFSSGGKLNQIESALKAVSLGGQCVGVKAKNGAVIACESKPSSPLVEKVTNLKVQKINDNVGIVYSGVNTDFHVILKSLRKASIKYSLRLGVEMPTREVVKHAAHKMQYYTQIGGVRPFGVSLLIIGWEELGPTLWQVDPSGTFWAWKATALGKRSDGSRTFLERRYSEDQSVDDAIHTAISTLKEGFDGQLTAELIEIGVVDETRKFRTLSTAEIRDFLTEV |
| Family T1, proteasome alpha subunit, threonine peptidase | P | 232 | Trichomonas Vaginalis G3 | MGDSDFSLTTFSSGGKLNQIESALKAVSLGGQCVGVKAKNGAVIACESKPSSPLVEKVTNLKVQKINDNVGIVYSGVNTDFHVILKSLRKASIKYSLRLGVEMPTREVVKHAAHKMQYYTQIGGVRPFGVSLLIIGWEELGPTLWQVDPSGTFWAWKATALGKRSDGSRTFLERRYSEDQSVDDAIHTAISTLKEGFDGQLTAELIEIGVVDETRKFRTLSTAEIRDFLTEV |
| Proteasome subunit alpha type | C | 251 | Trichomonas Vaginalis G3 | MTYRYDAGTTTFSSDGRILQVEYAIQSINQAGTAIGVQFTNGVVLAAEKKNTGRLVDYLFPEKMAKIDGHIVTAVAGLTADANTLVDLMRTSAQKYLKTYDEQMPVEQLVRMVCDEKHSYTQYGGLRPYGVSFLIAGYDRHKGCQLYLTDPSGNFGGWKATAIGENNQTAQSILKSQYKDNMTATEAMDLTVKVLCKTLDSTSLSADKLEFAVLQFREEYGPKVRILTTSEVDTLMKRYEETIKKSAEEKE |
| Proteasome subunit alpha type | Q | 251 | Trichomonas Vaginalis G3 | MTYRYDAGTTTFSSDGRILQVEYAIQSINQAGTAIGVQFTNGVVLAAEKKNTGRLVDYLFPEKMAKIDGHIVTAVAGLTADANTLVDLMRTSAQKYLKTYDEQMPVEQLVRMVCDEKHSYTQYGGLRPYGVSFLIAGYDRHKGCQLYLTDPSGNFGGWKATAIGENNQTAQSILKSQYKDNMTATEAMDLTVKVLCKTLDSTSLSADKLEFAVLQFREEYGPKVRILTTSEVDTLMKRYEETIKKSAEEKE |
| Proteasome subunit alpha type | D | 235 | Trichomonas Vaginalis G3 | MSDYTRSITRFSPDGRLFQIDHAHAAVQRGTTVVATRSKDMIVIAVEKTAVAKLQDPHTFSKICSLDKHVMCAFAGLHADARRLIQSGQRQCQSHRLTYEDPISIENIARYIATLQLKNTQSGGARPYGVSTLICGFDDMTSQPHIYETLPSGTYAEWKARTIGRHDQTVMEYLEKHYKDDMTDEEAQKLAIGALLEVVENGSKNLEVAYMKRGGTMEIMAEEVLDALIESTKAK |
| Proteasome subunit alpha type | R | 235 | Trichomonas Vaginalis G3 | MSDYTRSITRFSPDGRLFQIDHAHAAVQRGTTVVATRSKDMIVIAVEKTAVAKLQDPHTFSKICSLDKHVMCAFAGLHADARRLIQSGQRQCQSHRLTYEDPISIENIARYIATLQLKNTQSGGARPYGVSTLICGFDDMTSQPHIYETLPSGTYAEWKARTIGRHDQTVMEYLEKHYKDDMTDEEAQKLAIGALLEVVENGSKNLEVAYMKRGGTMEIMAEEVLDALIESTKAK |
| Proteasome subunit alpha type | E | 251 | Trichomonas Vaginalis G3 | MFNSGSEYDRNVNTFSPDGRLLQVEYAIEAVKLGSSAVAILCPEGVIFAVEKRLSSQLLIASSVEKVYAIDDHVGVVMAGLAADGRTMVEHMRVEAQNHRFSFDEPIGIKAVTQSVCDLALAFGEGRRKKGDGQMSRPFGTALLVAGIENGKCHLFHTDPSGTYTECRARAIGGGSEGAEALLRDLYKDGMTLHEAEDLALSTLRQVIQEKLNENNVEVACARVSTGKFEIYTSEQRQEIVARLPPPIIPE |
| Proteasome subunit alpha type | S | 251 | Trichomonas Vaginalis G3 | MFNSGSEYDRNVNTFSPDGRLLQVEYAIEAVKLGSSAVAILCPEGVIFAVEKRLSSQLLIASSVEKVYAIDDHVGVVMAGLAADGRTMVEHMRVEAQNHRFSFDEPIGIKAVTQSVCDLALAFGEGRRKKGDGQMSRPFGTALLVAGIENGKCHLFHTDPSGTYTECRARAIGGGSEGAEALLRDLYKDGMTLHEAEDLALSTLRQVIQEKLNENNVEVACARVSTGKFEIYTSEQRQEIVARLPPPIIPE |
| Family T1, proteasome alpha subunit, threonine peptidase | F | 233 | Trichomonas Vaginalis G3 | MFRSKYDENATTFSPEGRILQVENAMKAVQQGMPTVGLKSKTHAVIAGVMHSPSEFSSHQPKIFKIDQHIGVAISGLTADGRGLCKFLRNECLHHTFCFGTEIRVADLADTVALQSQKKTSKVGKRPYGVGLLMIGAGVDGPRLFETCPSGQHWEYNAQAIGRRAQAAKTYLETNLNEFPDCTRDQLIRHALRALNDCKSRESDSLEAIALGVVGIDEPFTILEGPELQKYID |
| Family T1, proteasome alpha subunit, threonine peptidase | T | 233 | Trichomonas Vaginalis G3 | MFRSKYDENATTFSPEGRILQVENAMKAVQQGMPTVGLKSKTHAVIAGVMHSPSEFSSHQPKIFKIDQHIGVAISGLTADGRGLCKFLRNECLHHTFCFGTEIRVADLADTVALQSQKKTSKVGKRPYGVGLLMIGAGVDGPRLFETCPSGQHWEYNAQAIGRRAQAAKTYLETNLNEFPDCTRDQLIRHALRALNDCKSRESDSLEAIALGVVGIDEPFTILEGPELQKYID |
| Family T1, proteasome alpha subunit, threonine peptidase | G | 240 | Trichomonas Vaginalis G3 | MSGAGSGYDFNPITFSPDGRQFQVEYATKAVEKDSLALGVKCKDGILLAAEKNLTSTLLTPGGNPRIFWINDSIACATIGHRPDCYSIVEQSRNRAETFTSNFGIKITVPQLASEVSQQFHLAHYYQAYRPFGCTVIFASYKDDALYAIEPSGAFYGYFASCFGKNSNLARAELQKTEWKNITVREAVPEVARIIKSLHESQFKKWEIEMFWLCEETNGRPQKVPEDVFQSRFVNENPQN |
| Family T1, proteasome alpha subunit, threonine peptidase | U | 240 | Trichomonas Vaginalis G3 | MSGAGSGYDFNPITFSPDGRQFQVEYATKAVEKDSLALGVKCKDGILLAAEKNLTSTLLTPGGNPRIFWINDSIACATIGHRPDCYSIVEQSRNRAETFTSNFGIKITVPQLASEVSQQFHLAHYYQAYRPFGCTVIFASYKDDALYAIEPSGAFYGYFASCFGKNSNLARAELQKTEWKNITVREAVPEVARIIKSLHESQFKKWEIEMFWLCEETNGRPQKVPEDVFQSRFVNENPQN |
| Proteasome subunit beta | H | 204 | Trichomonas Vaginalis G3 | TTLLAIQCTDGVVMASDSRTSSGSFIPNRATNKITEIQPKIFAARCGNAADTQFLARAVKNYLNALNITRENTDDSTILVASNVIRSLIVRYRQYLSAGVIVGGWDSAGPQVYSIEVSGMAIKKKIASNGSGSTYIQAYIDQNYREDMTMEEATKFAIAAVTGAIIRDGSSGGVVNIVQINADGAKRMTVRPAQQPFNYDIVKG |
| Proteasome subunit beta | V | 204 | Trichomonas Vaginalis G3 | TTLLAIQCTDGVVMASDSRTSSGSFIPNRATNKITEIQPKIFAARCGNAADTQFLARAVKNYLNALNITRENTDDSTILVASNVIRSLIVRYRQYLSAGVIVGGWDSAGPQVYSIEVSGMAIKKKIASNGSGSTYIQAYIDQNYREDMTMEEATKFAIAAVTGAIIRDGSSGGVVNIVQINADGAKRMTVRPAQQPFNYDIVKG |
| proteasome endopeptidase complex | I | 244 | Trichomonas Vaginalis G3 | TTIAAAIFDGGVVLGADTRATAGPIVAVKDEMKLHYISDNIWVCGAGIAADNDNINAVISAKLRLFQMNTGLQPRVDQCTNILASRLFQYMGYIQAALIVGGIDFQGPQVYQVAPHGSFSKQPFIAQGSGSLAAISVLENRWHNKMNEHDCMEMVADAIYAGITNDLGSGSHVNLCVIKRENPEDKQSKVIYTFYKDYRVPHENDRNFRLEPQINNIDVEVIKTTERPLTLPDVHLEILDDAPA |
| proteasome endopeptidase complex | W | 244 | Trichomonas Vaginalis G3 | TTIAAAIFDGGVVLGADTRATAGPIVAVKDEMKLHYISDNIWVCGAGIAADNDNINAVISAKLRLFQMNTGLQPRVDQCTNILASRLFQYMGYIQAALIVGGIDFQGPQVYQVAPHGSFSKQPFIAQGSGSLAAISVLENRWHNKMNEHDCMEMVADAIYAGITNDLGSGSHVNLCVIKRENPEDKQSKVIYTFYKDYRVPHENDRNFRLEPQINNIDVEVIKTTERPLTLPDVHLEILDDAPA |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2023-03-23 Deposition Author(s): Boura, E. , Fajtova, P. , Silhan, J.