PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8KI8

Structure of tomato spotted wilt virus l protein binding to 5'vrna

PDB DOI: 10.2210/pdb8ki8/pdb

Classification: VIRAL PROTEIN/RNA
Organism(s): Orthotospovirus Tomatomaculae , Synthetic Construct

Deposited: 2023-08-23
Deposition Author(s): Cao, L. , Wang, X.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.2 Å

8ki8
Literature

Structure of tomato spotted wilt virus l protein binding to 5'vrna

Cao, L. , Wang, X.

Primary Citation of Related Structures: 8KI8


Proteins
Molecule Chains Sequence Length Organism Sequence
RNA-directed RNA polymerase L A 1775 Orthotospovirus Tomatomaculae , Synthetic Construct VFFSHWTSKYKERNPTEIAYSEDIERIIDSLVTDEITKEEIIHFLFGNFCFHIETMNDQHIADKFKGYQSSCINLKIEPKVDLADLKDHLIQKQQIWESLYGKHLEKIMLRIREKKKKEKEIPDITTAFNQNAAEYEEKYPNCFTNDLSETKTNFSMTWSPSFEKIELSSEVDYNNAIINKFRESFKSSSRVIYNSPYSSINNQTNKARDITNLVRLCLTELSCDTTKMEKQELEDEIDINTGSIKVERTKKSKEWNKQGSCLTRNKNEFCMKETGRENKTIYFKGLAVMNIGMSSKKRILKKEEIKERISKGLEYDTSERQADPNDDYSSIDMSSLTHMKKLIRHDNEDSLSWCERIKDSLFVLHNGDIREEGKITSVYNNYAKNPECLYIQDSVLKTELETCKKINKLCNDLAIYHYSEDMMQFSKGLMVADRYMTKESFKILTTANTSMMLLAFKGDGMNTGGSGVPYIALHIVDEDMSDQFNICYTKEIYSYFRNGSNYIYIMRPQRLNQVRLLSLFKTPSKVPVCFAQFSKKANEMEKWLKNKDIEKVNVFSMTMTVKQILINIVFSSVMIGTVTKLSRMGIFDFMRYAGFLPLSDYSNIKEYIRDKFDPDITNVADIYFVNGIKKLLFRMEDLNLSTNAKPVVVDHENDIIGGITDLNIKCPITGSTLLTLEDLYNNVYLAIYMMPKSLHNHVHNLTSLLNVPAEWELKFRKELGFNIFEDIYPKKAMFDDKDLFSINGALNVKALSDYYLGNIENVGLMRSEIENKEDFLSPCYKISTLKSSKKCSQSNIISTDEIIECLQNAKIQDIENWKGNNLAIIKGLIRTYNEEKNRLVEFFEDNCVNSLYLVEKLKEIINSGSITVGKSVTSKFIRNNHPLTVETYLKTKLYYRNNVTVLKSKKVSEELYDLVKQFHNMMEIDLDSVMNLGKGTEGKKHTFLQMLEFVMSKAKNVTGSVDFLVSVFEKMQRTKTDREIYLMSMKVKMMLYFIEHTFKHVAQSDPSEAISISGDNKIRALSTLSLDTITSYNDILNKNSKKSRLAFLSADQSKWSASDLTYKYVLAIILNPILTTGEASLMIECILMYVKLKKVCIPTDIFLNLRKAQGTFGQNETAIGLLTKGLTTNTYPVSMNWLQGNLNYLSSVYHSCAMKAYHKTLECYKDCDFQTRWIVHSDDNATSLIASGEVDKMLTDFSSSSLPEMLFRSIEAHFKSFCITLNPKKSYASSSEVEFISERIVNGAIIPLYCRHLANCCTESSHISYFDDLMSLSIHVTMLLRKGCPNEVIPFAYGAVQVQALSIYSMLPGEVNDSIRIFKKLGVSLKSNEIPTNMGGWLTSPIEPLSILGPSSNDQIIYYNVIRDFLNKKSLEEVKDSVSSSSYLQMRFRELKGKYEKGTLEEKDKKMIFLINLFEKASVSEDSDVLTIGMKFQTMLTQIIKLPNFINENALNKMSSYKDFSKLYPNLKKNEDLYKSTKNLKIDEDAILEEDELYEKIASSLEMESVHDIMIKNPETILIAPLNDRDFLLSQLFMYTSPSKRNQLSNQSTEKLALDRVLRSKARTFVDISSTVKMTYEENMEKKILEMLKFDLDSYCSFKTCVNLVIKDVNFSMLIPILDSAYPCESRKRDNYNFRWFQTEKWIPVVEGSPGLVVMHAVYGSNYIENLGLKNIPLTDDSINVLTSTFGTGLIMEDVKSLVKGKDSFETEAFSNSNECQRLVKACNYMIAAQNRLLAINTCFTRKSFPFYSKFNLGRGFISNTLALLSTIYSKEES

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(P*AP*GP*AP*GP*CP*AP*AP*UP*CP*A)-3') e 10 NA AGAGCAAUCA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-08-23
Deposition Author(s): Cao, L. , Wang, X.