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FASTA Sequence PDB Format mmCIF Format
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8KI7

Structure of tomato spotted wilt virus l protein contained endoh domain binding to 3'5'vrna

PDB DOI: 10.2210/pdb8ki7/pdb

Classification: VIRAL PROTEIN/RNA
Organism(s): Tomato Spotted Wilt Virus (Strain Bulgarian L3) , Synthetic Construct

Deposited: 2023-08-23
Deposition Author(s): Cao, L. , Wang, X.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.7 Å

8ki7
Literature

Structure of tomato spotted wilt virus l protein contained endoh domain binding to 3'5'vrna

Cao, L. , Wang, X.

Primary Citation of Related Structures: 8KI7


Proteins
Molecule Chains Sequence Length Organism Sequence
RNA-directed RNA polymerase L A 2090 Tomato Spotted Wilt Virus (Strain Bulgarian L3) , Synthetic Construct MNIQKIQKLIENGTTLLLSIEDCVGSNYDLALDLHKRNSDEIPEDVIINNNAKNYETMRELIVKITADGEGLNKGMATVDVKKLSEMVSLFEQKYLETELARHDIFGELISRHLRIKPKQRSEVEIEHALREYLDELNKKSCINKLSDDEFERINKEYVATNATPDNYVIYKESKNSELCLIIYDWKISVDARTETKTMEKYYKNIWKSFKDIKVNGKPFLEDHPVFVSIVILKPIAGMPITVTSSRVLEKFEDSPSALHGERIKHARNAKLLNISHVGQIVGTTPTVVRNYYANTQKIKSEVRGILGDDFGSKDVFFSHWTSKYKERNPTEIAYSEDIERIIDSLVTDEITKEEIIHFLFGNFCFHIETMNDQHIADKFKGYQSSCINLKIEPKVDLADLKDHLIQKQQIWESLYGKHLEKIMLRIREKKKKEKEIPDITTAFNQNAAEYEEKYPNCFTNDLSETKTNFSMTWSPSFEKIELSSEVDYNNAIINKFRESFKSSSRVIYNSPYSSINNQTNKARDITNLVRLCLTELSCDTTKMEKQELEDEIDINTGSIKVERTKKSKEWNKQGSCLTRNKNEFCMKETGRENKTIYFKGLAVMNIGMSSKKRILKKEEIKERISKGLEYDTSERQADPNDDYSSIDMSSLTHMKKLIRHDNEDSLSWCERIKDSLFVLHNGDIREEGKITSVYNNYAKNPECLYIQDSVLKTELETCKKINKLCNDLAIYHYSEDMMQFSKGLMVADRYMTKESFKILTTANTSMMLLAFKGDGMNTGGSGVPYIALHIVDEDMSDQFNICYTKEIYSYFRNGSNYIYIMRPQRLNQVRLLSLFKTPSKVPVCFAQFSKKANEMEKWLKNKDIEKVNVFSMTMTVKQILINIVFSSVMIGTVTKLSRMGIFDFMRYAGFLPLSDYSNIKEYIRDKFDPDITNVADIYFVNGIKKLLFRMEDLNLSTNAKPVVVDHENDIIGGITDLNIKCPITGSTLLTLEDLYNNVYLAIYMMPKSLHNHVHNLTSLLNVPAEWELKFRKELGFNIFEDIYPKKAMFDDKDLFSINGALNVKALSDYYLGNIENVGLMRSEIENKEDFLSPCYKISTLKSSKKCSQSNIISTDEIIECLQNAKIQDIENWKGNNLAIIKGLIRTYNEEKNRLVEFFEDNCVNSLYLVEKLKEIINSGSITVGKSVTSKFIRNNHPLTVETYLKTKLYYRNNVTVLKSKKVSEELYDLVKQFHNMMEIDLDSVMNLGKGTEGKKHTFLQMLEFVMSKAKNVTGSVDFLVSVFEKMQRTKTDREIYLMSMKVKMMLYFIEHTFKHVAQSDPSEAISISGDNKIRALSTLSLDTITSYNDILNKNSKKSRLAFLSADQSKWSASDLTYKYVLAIILNPILTTGEASLMIECILMYVKLKKVCIPTDIFLNLRKAQGTFGQNETAIGLLTKGLTTNTYPVSMNWLQGNLNYLSSVYHSCAMKAYHKTLECYKDCDFQTRWIVHSDDNATSLIASGEVDKMLTDFSSSSLPEMLFRSIEAHFKSFCITLNPKKSYASSSEVEFISERIVNGAIIPLYCRHLANCCTESSHISYFDDLMSLSIHVTMLLRKGCPNEVIPFAYGAVQVQALSIYSMLPGEVNDSIRIFKKLGVSLKSNEIPTNMGGWLTSPIEPLSILGPSSNDQIIYYNVIRDFLNKKSLEEVKDSVSSSSYLQMRFRELKGKYEKGTLEEKDKKMIFLINLFEKASVSEDSDVLTIGMKFQTMLTQIIKLPNFINENALNKMSSYKDFSKLYPNLKKNEDLYKSTKNLKIDEDAILEEDELYEKIASSLEMESVHDIMIKNPETILIAPLNDRDFLLSQLFMYTSPSKRNQLSNQSTEKLALDRVLRSKARTFVDISSTVKMTYEENMEKKILEMLKFDLDSYCSFKTCVNLVIKDVNFSMLIPILDSAYPCESRKRDNYNFRWFQTEKWIPVVEGSPGLVVMHAVYGSNYIENLGLKNIPLTDDSINVLTSTFGTGLIMEDVKSLVKGKDSFETEAFSNSNECQRLVKACNYMIAAQNRLLAINTCFTRKSFPFYSKFNLGRGFISNTLALLSTIYSKEES

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(P*AP*GP*AP*GP*CP*AP*AP*UP*CP*A)-3') e 10 NA AGAGCAAUCA
RNA (5'-R(P*GP*CP*AP*AP*UP*CP*AP*GP*G)-3') b 9 NA GCAAUCAGG
RNA (5'-R(P*AP*CP*CP*UP*GP*AP*UP*UP*GP*CP*UP*CP*U)-3') f 13 NA ACCUGAUUGCUCU
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-08-23
Deposition Author(s): Cao, L. , Wang, X.