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FASTA Sequence PDB Format mmCIF Format
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8KHR

Cryo-em structure of ebv gh/gl-gp42 in complex with fab 2c1

PDB DOI: 10.2210/pdb8khr/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Epstein-Barr Virus (Strain Gd1) , Homo Sapiens

Deposited: 2023-08-22
Deposition Author(s): Fang, X.Y. , Liu, Z. , Zeng, M.S. , Zhao, G.X.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.25 Å

8khr
Literature

Cryo-em structure of ebv gh/gl-gp42 in complex with fab 2c1

Fang, X.Y. , Liu, Z. , Zeng, M.S. , Zhao, G.X.

Primary Citation of Related Structures: 8KHR


Proteins
Molecule Chains Sequence Length Organism Sequence
Soluble gp42 C 196 Epstein-Barr Virus (Strain Gd1) , Homo Sapiens GGRVAAAAITWVPKPNVEVWPVDPPPPVNFNKTAEQEYGDKEVKLPHWTPTLHTFQVPQNYTKANCTYCNTREYTFSYKGCCFYFTKKKHTWNGCFQACAELYPCTYFYGPTPDILPVVTRNLNAIESLWVGVYRVGEGNWTSLDGGTFKVYQIFGSHCTYVSKFSTVPVSHHECSFLKPCLCVSQRSNSHHHHHH
2C1 heavy chain H 111 Epstein-Barr Virus (Strain Gd1) , Homo Sapiens QLVQSGAEVKKPGSSVKVSCRASGGTFDTYAISWVRQAPGHGLEWMGGIIPVSGTANYAQKFQGRVTITADESTGTAYMDLSSLRSEDTAVYYCARVPDYGTNTPFDYWGQ
2C1 light chain L 107 Epstein-Barr Virus (Strain Gd1) , Homo Sapiens DIRLTQSPSSLPASVGDRVTITCRASQDIATYLAWYQQKPGRAPNLLIYATSTLQSGVPPRFSGSRSGTDFTLTISSLQPEDFATYYCQQLRTYPITFGQGTRLEIK
Envelope glycoprotein H A 655 Epstein-Barr Virus (Strain Gd1) , Homo Sapiens LSEVKLHLDIEGHASHYTIPWTELMAKVPGLSPEALWREANVTEDLASMLNRYKLIYKTSGTLGIALAEPVDIPAVSEGSMQVDASKVHPGVISGLNSPACMLSAPLEKQLFYYIGTMLPNTRPHSYVFYQLRCHLSYVALSINGDKFQYTGAMTSKFLMGTYKRVTEKGDEHVLSLVFGKTKDLPDLRGPFSYPSLTSAQSGDYSLVIVTTFVHYANFHNYFVPNLKDMFSRAVTMTAASYARYVLQKLVLLEMKGGCREPELDTETLTTMFEVSVAFFKVGHAVGETGNGCVDLRWLAKSFFELTVLKDIIGICYGATVKGMQSYGLERLAAMLMATVKMEELGHLTTEKQEYALRLATVGYPKAGVYSGLIGGATSVLLSAYNRHPLFQPLHTVMRETLFIGSHVVLRELRLNVTTQGPNLALYQLLSTALCSALEIGEVLRGLALGTESGLFSPCYLSLRFDLTRDKLLSMAPQEATLDQAAVSNAVDGFLGRLSLEREDRDAWHLPAYKCVDRLDKVLMIIPLINVTFIISSDREVRGSALYEASTTYLSSSLFLSPVIMNKCSQGAVAGEPRQIPKIQNFTRTQKSCIFCGFALLSYDEKEGLETTTYITSQEVQNSILSSNYFDFDNLHVHYLLLTTNGTVMEIAGLY
Envelope glycoprotein L B 107 Epstein-Barr Virus (Strain Gd1) , Homo Sapiens PCCHVTQLRAQHLLALENISDIYLVSNQTCDGFSLASLNSPKNGSNQLVISRCANGLNVVSFFISILKRSSSALTGHLRELLTTLETLYGSFSVEDLFGANLNRYAW
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-08-22
Deposition Author(s): Fang, X.Y. , Liu, Z. , Zeng, M.S. , Zhao, G.X.