PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8KDB

Cryo-em structure of the human parainfluenza virus hpiv3 l-p polymerase in dimeric form

PDB DOI: 10.2210/pdb8kdb/pdb

Classification: VIRAL PROTEIN
Organism(s): Human Respirovirus 3

Deposited: 2023-08-09
Deposition Author(s): Chen, S. , Fearns, R. , Gao, L. , Huang, X. , Lin, Z. , Wang, L. , Wang, M. , Wu, D. , Xie, J. , Yan, X. , Zhai, G.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.7 Å

8kdb
Literature

Cryo-em structure of the human parainfluenza virus hpiv3 l-p polymerase in dimeric form

Chen, S. , Fearns, R. , Gao, L. , Huang, X. , Lin, Z. , Wang, L. , Wang, M. , Wu, D. , Xie, J. , Yan, X. , Zhai, G.

Primary Citation of Related Structures: 8KDB


Proteins
Molecule Chains Sequence Length Organism Sequence
RNA-directed RNA polymerase L A 2266 Human Respirovirus 3 MISNQQSDNGQKENIKNLGAKRARKMDTESNNGTVSDILYPECHLNSPIVKGKIAQLHTIMSLPQPYDMDDDSILVITRQKIKLNKLDKRQRSIRRLKLILTEKVNDLGKYTFIRYPEMSKEMFKLYIPGINSKVTELLLKADRTYSQMTDGLRDLWINVLSKLASKNDGSNYDLNEEINNISKVHTTYKSDKWYNPFKTWFTIKYDMRRLQKARNEITFNVGKDYNLLEDQKNFLLIHPELVLILDKQNYNGYLITPELVLMYCDVVEGRWNISACAKLDPKLQSMYQKGNNLWEVIDKLFPIMGEKTFDVISLLEPLALSLIQTHDPVKQLRGAFLNHVLSEMELIFESGESIREFLSVDYIDKILDIFNESTIDEIAEIFSFFRTFGHPPLEASIAAEKVRKYMYIEKQLKFDTVNKCHAIFCTIIINGYRERHGGQWPPVTLPDHAHEFIINAYGSNSAISYENAVDYYQSFIGIKFNKFIEPQLDEDLTIYMKDKALSPKKSNWDTVYPASNLLYRTNASNESRRLVEVFIADSKFDPHQILDYVESGDWLDDPEFNISYSLKEKEIKQEGRLFAKMTYKMRATQVLSETLLANNIGKFFQENGMVKGEIELLKRLTTISISGVPRYNEVYNNSKSHTDDLKTYNKISNLNLSSNQKSKKFEFKSTDIYNDGYETVSCFLTTDLKKYCLNWRYESTALFGETCNQIFGLNKLFNWLHPRLEGSTIYVGDPYCPPSDKEHISLEDHPDSGFYVHNPRGGIEGFCQKLWTLISISAIHLAAVRIGVRVTAMVQGDNQAIAVTTRVPNNYDYRIKKEIVYKDVVRFFDSLREVMDDLGHELKLNETIISSKMFIYSKRIYYDGRILPQALKALSRCVFWSETVIDETRSASSNLATSFAKAIENGYSPVLGYACSIFKNIQQLYIALGMNINPTITQNIKDQYFKNSNWMQYASLIPASVGGFNYMAMSRCFVRNIGDPSVAALADIKRFIKANLLDRSVLYRIMNQEPGESSFLDWASDPYSCNLPQSQNITTMIKNITARNVLQDSPNPLLSGLFTNTMIEEDEELAEFLMDRKVILPRVAHDILDNSLTGIRNAIAGMLDTTKSLIRVGINRGGLTYSLLRKISNYDLVQYETLSRTLRLIVSDKIRYEDMCSVDLAIALRQKMWIHLSGGRMISGLETPDPLELLSGVVITGSEHCKICYSSDGTNPYTWMYLPGNIKIGSAETGVSSLRVPYFGSVTDERSEAQLGYIKNLSKPAKAAIRIAMIYTWAFGNDEISWMEASQIAQTRANFTLDSLKILTPVATSTNLSHRLKDTATQMKFSSTSLIRVSRFITMSNDNMSIKEANETKDTNLIYQQIMLTGLSVFEYLFRLKETTGHNPIVMHLHIEDECCIKESFNDEHINPESTLELIRYPESNEFIYDKDPLKDVDLSKLMVIKDHSYTIDMNYWDDTDIIHAISICTAITIADTMSQLDRDNLKEIIVIANDDDINSLITEFLTLDILVFLKTFGGLLVNQFAYTLYSLKIEGRDLIWDYIMRTLRDTSHSILKVLSNALSHPKVFKRFWDCGVLNPIYGPNTASQDQIKLALSICEYALDLFMREWLNGVSLEIYICDSDMEVANDRKQAFISRHLSFVCCLAEIASFGPNLLNLTYLERLDLLKQYLELNIKEDPTLKYVQISGLLIKSFPSTVTYVRKTAIKYLRIRGISPPEVIDDWDPIEDENMLDNIVKTINDNCNKDNKGNKINNFWGLALKNYQVLKIRSITSDSDDNDRLDASTSGLTLPQGGNYLSHQLRLFGINSTSCLKALELSQILMKEVNKDKDRLFLGEGAGAMLACYDATLGPAINYYNSGLNITDVIGQRELKIFPSEVSLVGKKLGNVTQILNRVKVLFNGNPNSTWIGNMECESLIWSELNDKSIGLVHCDMEGAIGKSEETVLHEHYSVIRITYLIGDDDVVLVSKIIPTITPNWSRILYLYKLYWKDVSIISLKTSNPASTELYLISKDAYCTIMEPSEVVLSKLKRLSLLEENNLLKWIILSKKRNNEWLHHEIKEGERDYGVMRPYHMALQIFGFQINLNHLAKEFLSTPDLTNINNIIQSFQRTIKDVLFEWINITHDDKRHKLGGRYNIFPLKNKGKLRLLSRRLVLSWISLSLSTRLLTGRFPDEKFEHRAQTGYVSLADTDLESLKLLSKNIIKNYRECIGSISYWFLTKEVKILMKLIGGAKLLGIPRQYKEPEEQLLENYNQHDEFDIDDYKDDDDK
RNA-directed RNA polymerase L G 2266 Human Respirovirus 3 MISNQQSDNGQKENIKNLGAKRARKMDTESNNGTVSDILYPECHLNSPIVKGKIAQLHTIMSLPQPYDMDDDSILVITRQKIKLNKLDKRQRSIRRLKLILTEKVNDLGKYTFIRYPEMSKEMFKLYIPGINSKVTELLLKADRTYSQMTDGLRDLWINVLSKLASKNDGSNYDLNEEINNISKVHTTYKSDKWYNPFKTWFTIKYDMRRLQKARNEITFNVGKDYNLLEDQKNFLLIHPELVLILDKQNYNGYLITPELVLMYCDVVEGRWNISACAKLDPKLQSMYQKGNNLWEVIDKLFPIMGEKTFDVISLLEPLALSLIQTHDPVKQLRGAFLNHVLSEMELIFESGESIREFLSVDYIDKILDIFNESTIDEIAEIFSFFRTFGHPPLEASIAAEKVRKYMYIEKQLKFDTVNKCHAIFCTIIINGYRERHGGQWPPVTLPDHAHEFIINAYGSNSAISYENAVDYYQSFIGIKFNKFIEPQLDEDLTIYMKDKALSPKKSNWDTVYPASNLLYRTNASNESRRLVEVFIADSKFDPHQILDYVESGDWLDDPEFNISYSLKEKEIKQEGRLFAKMTYKMRATQVLSETLLANNIGKFFQENGMVKGEIELLKRLTTISISGVPRYNEVYNNSKSHTDDLKTYNKISNLNLSSNQKSKKFEFKSTDIYNDGYETVSCFLTTDLKKYCLNWRYESTALFGETCNQIFGLNKLFNWLHPRLEGSTIYVGDPYCPPSDKEHISLEDHPDSGFYVHNPRGGIEGFCQKLWTLISISAIHLAAVRIGVRVTAMVQGDNQAIAVTTRVPNNYDYRIKKEIVYKDVVRFFDSLREVMDDLGHELKLNETIISSKMFIYSKRIYYDGRILPQALKALSRCVFWSETVIDETRSASSNLATSFAKAIENGYSPVLGYACSIFKNIQQLYIALGMNINPTITQNIKDQYFKNSNWMQYASLIPASVGGFNYMAMSRCFVRNIGDPSVAALADIKRFIKANLLDRSVLYRIMNQEPGESSFLDWASDPYSCNLPQSQNITTMIKNITARNVLQDSPNPLLSGLFTNTMIEEDEELAEFLMDRKVILPRVAHDILDNSLTGIRNAIAGMLDTTKSLIRVGINRGGLTYSLLRKISNYDLVQYETLSRTLRLIVSDKIRYEDMCSVDLAIALRQKMWIHLSGGRMISGLETPDPLELLSGVVITGSEHCKICYSSDGTNPYTWMYLPGNIKIGSAETGVSSLRVPYFGSVTDERSEAQLGYIKNLSKPAKAAIRIAMIYTWAFGNDEISWMEASQIAQTRANFTLDSLKILTPVATSTNLSHRLKDTATQMKFSSTSLIRVSRFITMSNDNMSIKEANETKDTNLIYQQIMLTGLSVFEYLFRLKETTGHNPIVMHLHIEDECCIKESFNDEHINPESTLELIRYPESNEFIYDKDPLKDVDLSKLMVIKDHSYTIDMNYWDDTDIIHAISICTAITIADTMSQLDRDNLKEIIVIANDDDINSLITEFLTLDILVFLKTFGGLLVNQFAYTLYSLKIEGRDLIWDYIMRTLRDTSHSILKVLSNALSHPKVFKRFWDCGVLNPIYGPNTASQDQIKLALSICEYALDLFMREWLNGVSLEIYICDSDMEVANDRKQAFISRHLSFVCCLAEIASFGPNLLNLTYLERLDLLKQYLELNIKEDPTLKYVQISGLLIKSFPSTVTYVRKTAIKYLRIRGISPPEVIDDWDPIEDENMLDNIVKTINDNCNKDNKGNKINNFWGLALKNYQVLKIRSITSDSDDNDRLDASTSGLTLPQGGNYLSHQLRLFGINSTSCLKALELSQILMKEVNKDKDRLFLGEGAGAMLACYDATLGPAINYYNSGLNITDVIGQRELKIFPSEVSLVGKKLGNVTQILNRVKVLFNGNPNSTWIGNMECESLIWSELNDKSIGLVHCDMEGAIGKSEETVLHEHYSVIRITYLIGDDDVVLVSKIIPTITPNWSRILYLYKLYWKDVSIISLKTSNPASTELYLISKDAYCTIMEPSEVVLSKLKRLSLLEENNLLKWIILSKKRNNEWLHHEIKEGERDYGVMRPYHMALQIFGFQINLNHLAKEFLSTPDLTNINNIIQSFQRTIKDVLFEWINITHDDKRHKLGGRYNIFPLKNKGKLRLLSRRLVLSWISLSLSTRLLTGRFPDEKFEHRAQTGYVSLADTDLESLKLLSKNIIKNYRECIGSISYWFLTKEVKILMKLIGGAKLLGIPRQYKEPEEQLLENYNQHDEFDIDDYKDDDDK
Phosphoprotein B 609 Human Respirovirus 3 MESDAKNYQIMDSWEEESRDKSTNISSALNIIEFILSTDPQEDLSENDTINTRTQQLSATIYQPKIKPTETSEKDSGSTDKNRQSGSSHECTTEAKDRTIDQETVQRGPGRRSSSDSRAETVVSGGISRSITNSKNGTQNTEDIDLNEIRKMDKDSIEGKVRQSADVPSEISGSDVIFTTEQSRNSDHGRSLESISTPDTRSISVVTAATPDDEEEILMKNSRTKKSSSIHQEDDKRIKKGGKGKDWFKKSKDTDNQIPTSDYRSTSKGQKKISKTTTINTDTKGQTEIQTESSGTQSSSWNLTIDNNTDRTEQTNTTPPTTTSGSTYTKESIRTNSGSKPKTQKTNGKERKDTEESNRFTERAITLLQNLGVIQSTSKLDLYQDKRVVCVANVLNNVDTASKIDFLAGLVIGVSMDNDTKLTQIQNEMLNLKADLKKMDESHRRLIENQREQLSLITSLISNLKIMTERGGKKDQNESNERVSMIKTKLKEEKIKKTRFDPLMETQGIDKNIPDLYRHAGNTLENDVQVKSEILSSYNESNATRLIPKKVSSTMRSLVAVISNSNLSQSTKQSYINELKHCKNDEEVSELMDMFNEDVNNCQHHHHHH
Phosphoprotein C 609 Human Respirovirus 3 MESDAKNYQIMDSWEEESRDKSTNISSALNIIEFILSTDPQEDLSENDTINTRTQQLSATIYQPKIKPTETSEKDSGSTDKNRQSGSSHECTTEAKDRTIDQETVQRGPGRRSSSDSRAETVVSGGISRSITNSKNGTQNTEDIDLNEIRKMDKDSIEGKVRQSADVPSEISGSDVIFTTEQSRNSDHGRSLESISTPDTRSISVVTAATPDDEEEILMKNSRTKKSSSIHQEDDKRIKKGGKGKDWFKKSKDTDNQIPTSDYRSTSKGQKKISKTTTINTDTKGQTEIQTESSGTQSSSWNLTIDNNTDRTEQTNTTPPTTTSGSTYTKESIRTNSGSKPKTQKTNGKERKDTEESNRFTERAITLLQNLGVIQSTSKLDLYQDKRVVCVANVLNNVDTASKIDFLAGLVIGVSMDNDTKLTQIQNEMLNLKADLKKMDESHRRLIENQREQLSLITSLISNLKIMTERGGKKDQNESNERVSMIKTKLKEEKIKKTRFDPLMETQGIDKNIPDLYRHAGNTLENDVQVKSEILSSYNESNATRLIPKKVSSTMRSLVAVISNSNLSQSTKQSYINELKHCKNDEEVSELMDMFNEDVNNCQHHHHHH
Phosphoprotein D 609 Human Respirovirus 3 MESDAKNYQIMDSWEEESRDKSTNISSALNIIEFILSTDPQEDLSENDTINTRTQQLSATIYQPKIKPTETSEKDSGSTDKNRQSGSSHECTTEAKDRTIDQETVQRGPGRRSSSDSRAETVVSGGISRSITNSKNGTQNTEDIDLNEIRKMDKDSIEGKVRQSADVPSEISGSDVIFTTEQSRNSDHGRSLESISTPDTRSISVVTAATPDDEEEILMKNSRTKKSSSIHQEDDKRIKKGGKGKDWFKKSKDTDNQIPTSDYRSTSKGQKKISKTTTINTDTKGQTEIQTESSGTQSSSWNLTIDNNTDRTEQTNTTPPTTTSGSTYTKESIRTNSGSKPKTQKTNGKERKDTEESNRFTERAITLLQNLGVIQSTSKLDLYQDKRVVCVANVLNNVDTASKIDFLAGLVIGVSMDNDTKLTQIQNEMLNLKADLKKMDESHRRLIENQREQLSLITSLISNLKIMTERGGKKDQNESNERVSMIKTKLKEEKIKKTRFDPLMETQGIDKNIPDLYRHAGNTLENDVQVKSEILSSYNESNATRLIPKKVSSTMRSLVAVISNSNLSQSTKQSYINELKHCKNDEEVSELMDMFNEDVNNCQHHHHHH
Phosphoprotein E 609 Human Respirovirus 3 MESDAKNYQIMDSWEEESRDKSTNISSALNIIEFILSTDPQEDLSENDTINTRTQQLSATIYQPKIKPTETSEKDSGSTDKNRQSGSSHECTTEAKDRTIDQETVQRGPGRRSSSDSRAETVVSGGISRSITNSKNGTQNTEDIDLNEIRKMDKDSIEGKVRQSADVPSEISGSDVIFTTEQSRNSDHGRSLESISTPDTRSISVVTAATPDDEEEILMKNSRTKKSSSIHQEDDKRIKKGGKGKDWFKKSKDTDNQIPTSDYRSTSKGQKKISKTTTINTDTKGQTEIQTESSGTQSSSWNLTIDNNTDRTEQTNTTPPTTTSGSTYTKESIRTNSGSKPKTQKTNGKERKDTEESNRFTERAITLLQNLGVIQSTSKLDLYQDKRVVCVANVLNNVDTASKIDFLAGLVIGVSMDNDTKLTQIQNEMLNLKADLKKMDESHRRLIENQREQLSLITSLISNLKIMTERGGKKDQNESNERVSMIKTKLKEEKIKKTRFDPLMETQGIDKNIPDLYRHAGNTLENDVQVKSEILSSYNESNATRLIPKKVSSTMRSLVAVISNSNLSQSTKQSYINELKHCKNDEEVSELMDMFNEDVNNCQHHHHHH
Phosphoprotein F 609 Human Respirovirus 3 MESDAKNYQIMDSWEEESRDKSTNISSALNIIEFILSTDPQEDLSENDTINTRTQQLSATIYQPKIKPTETSEKDSGSTDKNRQSGSSHECTTEAKDRTIDQETVQRGPGRRSSSDSRAETVVSGGISRSITNSKNGTQNTEDIDLNEIRKMDKDSIEGKVRQSADVPSEISGSDVIFTTEQSRNSDHGRSLESISTPDTRSISVVTAATPDDEEEILMKNSRTKKSSSIHQEDDKRIKKGGKGKDWFKKSKDTDNQIPTSDYRSTSKGQKKISKTTTINTDTKGQTEIQTESSGTQSSSWNLTIDNNTDRTEQTNTTPPTTTSGSTYTKESIRTNSGSKPKTQKTNGKERKDTEESNRFTERAITLLQNLGVIQSTSKLDLYQDKRVVCVANVLNNVDTASKIDFLAGLVIGVSMDNDTKLTQIQNEMLNLKADLKKMDESHRRLIENQREQLSLITSLISNLKIMTERGGKKDQNESNERVSMIKTKLKEEKIKKTRFDPLMETQGIDKNIPDLYRHAGNTLENDVQVKSEILSSYNESNATRLIPKKVSSTMRSLVAVISNSNLSQSTKQSYINELKHCKNDEEVSELMDMFNEDVNNCQHHHHHH
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-08-09
Deposition Author(s): Chen, S. , Fearns, R. , Gao, L. , Huang, X. , Lin, Z. , Wang, L. , Wang, M. , Wu, D. , Xie, J. , Yan, X. , Zhai, G.