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8K25

Structure of cas1-cas2-dsdna complex

PDB DOI: 10.2210/pdb8k25/pdb

Classification: ANTIBIOTIC
Organism(s): Vibrio Phage Icp1_2004_A

Deposited: 2023-07-12
Deposition Author(s): Feng, Y. , Zhang, L.X.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.4 Å

8k25
Literature

Structure of cas1-cas2-dsdna complex

Feng, Y. , Zhang, L.X.

Primary Citation of Related Structures: 8K25


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*CP*AP*AP*TP*TP*TP*AP*AP*AP*TP*AP*GP*GP*GP*AP*AP*G)-3') u 17 NA CAATTTAAATAGGGAAG
DNA (5'-D(P*TP*TP*CP*CP*CP*TP*AP*TP*TP*TP*AP*AP*AP*TP*TP*GP*C)-3') v 17 NA TTCCCTATTTAAATTGC

Proteins
Molecule Chains Sequence Length Organism Sequence
HD Cas3-type domain-containing protein A 81 Vibrio Phage Icp1_2004_A MFIRIKCFSKQPIAKKVSREVSAYLEYTGNNTWEGHISGQGVSNLQTKLINVGKGVKVVCNYQDKVLFAIGNVAMSDTGSV
Cas1 D 296 Vibrio Phage Icp1_2004_A MQKQILTSQKRNMYILSRCKVLVKNGQVCHLHEDGNVYTVPYANTVFIGLAEGTSITNEAMSMLAANGVIVFWTKGGGYDMFAADIICHLPQADYRPTKYMQNWVRLWLDEEKKLSAAKEILKMRVDSLSTHVHDFGVDVENKRVSSIVNKFDKGVTQATSFESLLGHEGTFVKSLYKEYALEYEIEFKRDHKSADNYNKFLTLGNYYAYGIARSSLWALGIDNSFPLLHGSTRRGGLVFDVADIIKTSIILPLAFHAADQGMSNTEFKRSCVAYFDKNDILAYLINNIKRLCMEN
Cas1 E 296 Vibrio Phage Icp1_2004_A MQKQILTSQKRNMYILSRCKVLVKNGQVCHLHEDGNVYTVPYANTVFIGLAEGTSITNEAMSMLAANGVIVFWTKGGGYDMFAADIICHLPQADYRPTKYMQNWVRLWLDEEKKLSAAKEILKMRVDSLSTHVHDFGVDVENKRVSSIVNKFDKGVTQATSFESLLGHEGTFVKSLYKEYALEYEIEFKRDHKSADNYNKFLTLGNYYAYGIARSSLWALGIDNSFPLLHGSTRRGGLVFDVADIIKTSIILPLAFHAADQGMSNTEFKRSCVAYFDKNDILAYLINNIKRLCMEN
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-07-12
Deposition Author(s): Feng, Y. , Zhang, L.X.