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8K21

Cas1-cas2-dsdna subregion in icp1 csy-dna-cas1-2/3 complex

PDB DOI: 10.2210/pdb8k21/pdb

Classification: ANTIBIOTIC/RNA BINDING PROTEIN/DNA
Organism(s): Vibrio Phage Icp1_2004_A

Deposited: 2023-07-12
Deposition Author(s): Feng, Y. , Zhang, L.X.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.8 Å

8k21
Literature

Cas1-cas2-dsdna subregion in icp1 csy-dna-cas1-2/3 complex

Feng, Y. , Zhang, L.X.

Primary Citation of Related Structures: 8K21


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*AP*GP*CP*AP*AP*TP*TP*TP*AP*AP*AP*TP*AP*GP*GP*GP*AP*AP*GP*AP*T)-3') u 21 NA AGCAATTTAAATAGGGAAGAT
DNA (5'-D(*AP*TP*CP*TP*TP*CP*CP*CP*TP*AP*TP*TP*TP*AP*AP*AP*TP*TP*GP*CP*T)-3') v 21 NA ATCTTCCCTATTTAAATTGCT

Proteins
Molecule Chains Sequence Length Organism Sequence
HD Cas3-type domain-containing protein A 75 Vibrio Phage Icp1_2004_A MFIRIKCFSKQPIAKKVSREVSAYLEYTGNNTWEGHISGQGVSNLQTKLINVGKGVKVVCNYQDKVLFAIGNVAM
Cas1 D 295 Vibrio Phage Icp1_2004_A MQKQILTSQKRNMYILSRCKVLVKNGQVCHLHEDGNVYTVPYANTVFIGLAEGTSITNEAMSMLAANGVIVFWTKGGGYDMFAADIICHLPQADYRPTKYMQNWVRLWLDEEKKLSAAKEILKMRVDSLSTHVHDFGVDVENKRVSSIVNKFDKGVTQATSFESLLGHEGTFVKSLYKEYALEYEIEFKRDHKSADNYNKFLTLGNYYAYGIARSSLWALGIDNSFPLLHGSTRRGGLVFDVADIIKTSIILPLAFHAADQGMSNTEFKRSCVAYFDKNDILAYLINNIKRLCME
Cas1 E 295 Vibrio Phage Icp1_2004_A MQKQILTSQKRNMYILSRCKVLVKNGQVCHLHEDGNVYTVPYANTVFIGLAEGTSITNEAMSMLAANGVIVFWTKGGGYDMFAADIICHLPQADYRPTKYMQNWVRLWLDEEKKLSAAKEILKMRVDSLSTHVHDFGVDVENKRVSSIVNKFDKGVTQATSFESLLGHEGTFVKSLYKEYALEYEIEFKRDHKSADNYNKFLTLGNYYAYGIARSSLWALGIDNSFPLLHGSTRRGGLVFDVADIIKTSIILPLAFHAADQGMSNTEFKRSCVAYFDKNDILAYLINNIKRLCME
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-07-12
Deposition Author(s): Feng, Y. , Zhang, L.X.