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8JYS

Sars-cov-2 spike rbd (dimer) in complex with two 2s-1244 nanobodies

PDB DOI: 10.2210/pdb8jys/pdb

Classification: VIRAL PROTEIN
Organism(s): Camelus Bactrianus , Severe Acute Respiratory Syndrome Coronavirus 2

Deposited: 2023-07-03
Deposition Author(s): Yang, Y. , Zhang, C.H.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.5 Å

Literature

Sars-cov-2 spike rbd (dimer) in complex with two 2s-1244 nanobodies

Yang, Y. , Zhang, C.H.

Primary Citation of Related Structures: 8JYS


Proteins
Molecule Chains Sequence Length Organism Sequence
IBT-CoV144 nanobody A 142 Camelus Bactrianus , Severe Acute Respiratory Syndrome Coronavirus 2 QVQLVESGGGPVQAGGSLRLSCTCSRCTFNWDGMGWFRQAPGKEREFVATISWSGQEPAYADSVKGRFTISRDKPKNTVYLQMTSLKSEDTAVYYCAAAQYTGASYSILRDQVGYDYWGQGTRVTVSAEPKTPKPQDGQAGQ
IBT-CoV144 nanobody C 142 Camelus Bactrianus , Severe Acute Respiratory Syndrome Coronavirus 2 QVQLVESGGGPVQAGGSLRLSCTCSRCTFNWDGMGWFRQAPGKEREFVATISWSGQEPAYADSVKGRFTISRDKPKNTVYLQMTSLKSEDTAVYYCAAAQYTGASYSILRDQVGYDYWGQGTRVTVSAEPKTPKPQDGQAGQ
Spike protein S1 B 196 Camelus Bactrianus , Severe Acute Respiratory Syndrome Coronavirus 2 TNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCYFPLRSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGPK
Spike protein S1 D 196 Camelus Bactrianus , Severe Acute Respiratory Syndrome Coronavirus 2 TNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCYFPLRSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGPK
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-07-03
Deposition Author(s): Yang, Y. , Zhang, C.H.