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FASTA Sequence PDB Format mmCIF Format
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8JYK

Structure of the sars-cov-2 xbb.1.5 spike glycoprotein (closed state 1)

PDB DOI: 10.2210/pdb8jyk/pdb

Classification: VIRAL PROTEIN
Organism(s): Severe Acute Respiratory Syndrome Coronavirus 2

Deposited: 2023-07-03
Deposition Author(s): Anraku, Y. , Hashiguchi, T. , Kimura, K. , Kita, S. , Maenaka, K. , Sasaki, J. , Sasaki-Tabata, K. , Yajima, H.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.59 Å

Literature

Structure of the sars-cov-2 xbb.1.5 spike glycoprotein (closed state 1)

Anraku, Y. , Hashiguchi, T. , Kimura, K. , Kita, S. , Maenaka, K. , Sasaki, J. , Sasaki-Tabata, K. , Yajima, H.

Primary Citation of Related Structures: 8JYK


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike glycoprotein A 1245 Severe Acute Respiratory Syndrome Coronavirus 2 LLMGCVAETGSSQCVNLITRTQSYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPALPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLDVYQKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKEGNFKNLREFVFKNIDGYFKIYSKHTPINLERDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPVDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFHEVFNATTFASVYAWNRKRISNCVADYSVIYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKPSGNYNYLYRLFRKSKLKPFERDISTEIYQAGNKPCNGVAGPNCYSPLQSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEYVNNSYECDIPIGAGICASYQTQTKSHGSAGSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLKRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKYFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDVVNHNAQALNTLVKQLSSKFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIASSGYIPEAPRDGQAYVRKDGEWVLLSTFLEGTKHHHHHH
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-07-03
Deposition Author(s): Anraku, Y. , Hashiguchi, T. , Kimura, K. , Kita, S. , Maenaka, K. , Sasaki, J. , Sasaki-Tabata, K. , Yajima, H.