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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8JN3

Cryo-em structure of dengue virus serotype 3 strain 863dk in complex with human antibody denv-115 fab at 37 deg c (subparticle llr-lrr)

PDB DOI: 10.2210/pdb8jn3/pdb

Classification: VIRUS/IMMUNE SYSTEM
Organism(s): Dengue Virus Type 3 , Homo Sapiens

Deposited: 2023-06-06
Deposition Author(s): Fibriansah, G. , Lok, S.M. , Ng, T.S. , Shi, J. , Tan, A.W.K.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 5.4 Å

8jn3
Literature

Cryo-em structure of dengue virus serotype 3 strain 863dk in complex with human antibody denv-115 fab at 37 deg c (subparticle llr-lrr)

Fibriansah, G. , Lok, S.M. , Ng, T.S. , Shi, J. , Tan, A.W.K.

Primary Citation of Related Structures: 8JN3


Proteins
Molecule Chains Sequence Length Organism Sequence
Envelope protein A 493 Dengue Virus Type 3 , Homo Sapiens MRCVGVGNRDFVEGLSGATWVDVVLEHGGCVTTMAKNKPTLDIELQKTEATQLATLRKLCIEGKITNITTDSRCPTQGEAVLPEEQDQNYVCKHTYVDRGWGNGCGLFGKGSLVTCAKFQCLEPIEGKVVQYENLKYTVIITVHTGDQHQVGNETQGVTAEITPQASTTEAILPEYGTLGLECSPRTGLDFNEMILLTMKNKAWMVHRQWFFDLPLPWASGATTETPTWNRKELLVTFKNAHAKKQEVVVLGSQEGAMHTALTGATEIQNSGGTSIFAGHLKCRLKMDKLELKGMSYAMCTNTFVLKKEVSETQHGTILIKVEYKGEDAPCKIPFSTEDGQGKAHNGRLITANPVVTKKEEPVNIEAEPPFGESNIVIGIGDNALKINWYKKGSSIGKMFEATARGARRMAILGDTAWDFGSVGGVLNSLGKMVHQIFGSAYTALFSGVSWVMKIGIGVLLTWIGLNSKNTSMSFSCIAIGIITLYLGAVVQA
Envelope protein C 493 Dengue Virus Type 3 , Homo Sapiens MRCVGVGNRDFVEGLSGATWVDVVLEHGGCVTTMAKNKPTLDIELQKTEATQLATLRKLCIEGKITNITTDSRCPTQGEAVLPEEQDQNYVCKHTYVDRGWGNGCGLFGKGSLVTCAKFQCLEPIEGKVVQYENLKYTVIITVHTGDQHQVGNETQGVTAEITPQASTTEAILPEYGTLGLECSPRTGLDFNEMILLTMKNKAWMVHRQWFFDLPLPWASGATTETPTWNRKELLVTFKNAHAKKQEVVVLGSQEGAMHTALTGATEIQNSGGTSIFAGHLKCRLKMDKLELKGMSYAMCTNTFVLKKEVSETQHGTILIKVEYKGEDAPCKIPFSTEDGQGKAHNGRLITANPVVTKKEEPVNIEAEPPFGESNIVIGIGDNALKINWYKKGSSIGKMFEATARGARRMAILGDTAWDFGSVGGVLNSLGKMVHQIFGSAYTALFSGVSWVMKIGIGVLLTWIGLNSKNTSMSFSCIAIGIITLYLGAVVQA
Envelope protein E 493 Dengue Virus Type 3 , Homo Sapiens MRCVGVGNRDFVEGLSGATWVDVVLEHGGCVTTMAKNKPTLDIELQKTEATQLATLRKLCIEGKITNITTDSRCPTQGEAVLPEEQDQNYVCKHTYVDRGWGNGCGLFGKGSLVTCAKFQCLEPIEGKVVQYENLKYTVIITVHTGDQHQVGNETQGVTAEITPQASTTEAILPEYGTLGLECSPRTGLDFNEMILLTMKNKAWMVHRQWFFDLPLPWASGATTETPTWNRKELLVTFKNAHAKKQEVVVLGSQEGAMHTALTGATEIQNSGGTSIFAGHLKCRLKMDKLELKGMSYAMCTNTFVLKKEVSETQHGTILIKVEYKGEDAPCKIPFSTEDGQGKAHNGRLITANPVVTKKEEPVNIEAEPPFGESNIVIGIGDNALKINWYKKGSSIGKMFEATARGARRMAILGDTAWDFGSVGGVLNSLGKMVHQIFGSAYTALFSGVSWVMKIGIGVLLTWIGLNSKNTSMSFSCIAIGIITLYLGAVVQA
Membrane protein B 75 Dengue Virus Type 3 , Homo Sapiens SVALAPHVGMGLDTRTQTWMSAEGAWRQVEKVETWALRHPGFTILALFLAHYIGTSLTQKVVIFILLMLVTPSMT
Membrane protein D 75 Dengue Virus Type 3 , Homo Sapiens SVALAPHVGMGLDTRTQTWMSAEGAWRQVEKVETWALRHPGFTILALFLAHYIGTSLTQKVVIFILLMLVTPSMT
Membrane protein F 75 Dengue Virus Type 3 , Homo Sapiens SVALAPHVGMGLDTRTQTWMSAEGAWRQVEKVETWALRHPGFTILALFLAHYIGTSLTQKVVIFILLMLVTPSMT
Human antibody DENV-115 heavy chain H 122 Dengue Virus Type 3 , Homo Sapiens QVQLVQSGAEVKKPGAPVKVSCEASGYTFTDYFIHWVRQAPGQGLEWMGWINPISGGTNYHPRFHGGVTMTRDTSMKVAYMELKRLTSDDTAVYFCARGRDFRGGYSQLDYWGQGTLVTVSS
Human antibody DENV-115 light chain L 110 Dengue Virus Type 3 , Homo Sapiens QSVLTQPPSASGTPGQRVTISCSGGSSNIAINTVNWYQQVPGTAPKLLMYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCATWDDSLKDVLFGGGTKLTVL
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-06-06
Deposition Author(s): Fibriansah, G. , Lok, S.M. , Ng, T.S. , Shi, J. , Tan, A.W.K.