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FASTA Sequence PDB Format mmCIF Format
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8JG5

Cryo-em structure of the gi.4 chiba vlp complexed with the cv-1a1 fv-clasp

PDB DOI: 10.2210/pdb8jg5/pdb

Classification: VIRUS
Organism(s): Chiba Virus , Homo Sapiens

Deposited: 2023-05-19
Deposition Author(s): Hosaka, T. , Katsura, K. , Kimura-Someya, T. , Shirouzu, M. , Someya, Y.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.04 Å

8jg5
Literature

Cryo-em structure of the gi.4 chiba vlp complexed with the cv-1a1 fv-clasp

Hosaka, T. , Katsura, K. , Kimura-Someya, T. , Shirouzu, M. , Someya, Y.

Primary Citation of Related Structures: 8JG5


Proteins
Molecule Chains Sequence Length Organism Sequence
VP1 A 542 Chiba Virus , Homo Sapiens MASKDATPSADGATGAGQLVPEVNTADPIPIDPVAGSSTAAPVAGQVNLIDPWIINNFVQAPQGEFTISPNNTPGDVLFDLQLGPHLNPFLSHLSQMYNGWVGNMRVRVVLAGNAFTAGKVIICCVPPGFQSRTLSIAQATLFPHVIADVRTLDPVEVPLEDVRNVLYHNNDTQPTMRLLCMLYTPLRTGGASGGTDSFVVAGRVLTCPGPDFNFLFLVPPTVEQKTRPFTVPNIPLKYLSNSRIPNPIEGMSLSPDQTQNVQFQNGRCTIDGQPLGTTPVSVSQLCKFRGRITSGQRVLNLTELDGSPFMAFAAPAPAGFPDLGSCDWHIEMSKIPNSSTQNNPIVTNSVKPNSQQFVPHLSSITLDENVSSGGDYIGTIQWTSPPSDSGGANTNFWKIPDYGSSLAEASQLAPAVYPPGFNEVIVYFMASIPGPNQSGSPNLVPCLLPQEYITHFISEQAPIQGEAALLHYVDPDTNRNLGEFKLYPGGYLTCVPNSSSTGPQQLPLDGVFVFASWVSRFYQLKPVGTAGPARGRLGVRR
VP1 B 542 Chiba Virus , Homo Sapiens MASKDATPSADGATGAGQLVPEVNTADPIPIDPVAGSSTAAPVAGQVNLIDPWIINNFVQAPQGEFTISPNNTPGDVLFDLQLGPHLNPFLSHLSQMYNGWVGNMRVRVVLAGNAFTAGKVIICCVPPGFQSRTLSIAQATLFPHVIADVRTLDPVEVPLEDVRNVLYHNNDTQPTMRLLCMLYTPLRTGGASGGTDSFVVAGRVLTCPGPDFNFLFLVPPTVEQKTRPFTVPNIPLKYLSNSRIPNPIEGMSLSPDQTQNVQFQNGRCTIDGQPLGTTPVSVSQLCKFRGRITSGQRVLNLTELDGSPFMAFAAPAPAGFPDLGSCDWHIEMSKIPNSSTQNNPIVTNSVKPNSQQFVPHLSSITLDENVSSGGDYIGTIQWTSPPSDSGGANTNFWKIPDYGSSLAEASQLAPAVYPPGFNEVIVYFMASIPGPNQSGSPNLVPCLLPQEYITHFISEQAPIQGEAALLHYVDPDTNRNLGEFKLYPGGYLTCVPNSSSTGPQQLPLDGVFVFASWVSRFYQLKPVGTAGPARGRLGVRR
VP1 G 542 Chiba Virus , Homo Sapiens MASKDATPSADGATGAGQLVPEVNTADPIPIDPVAGSSTAAPVAGQVNLIDPWIINNFVQAPQGEFTISPNNTPGDVLFDLQLGPHLNPFLSHLSQMYNGWVGNMRVRVVLAGNAFTAGKVIICCVPPGFQSRTLSIAQATLFPHVIADVRTLDPVEVPLEDVRNVLYHNNDTQPTMRLLCMLYTPLRTGGASGGTDSFVVAGRVLTCPGPDFNFLFLVPPTVEQKTRPFTVPNIPLKYLSNSRIPNPIEGMSLSPDQTQNVQFQNGRCTIDGQPLGTTPVSVSQLCKFRGRITSGQRVLNLTELDGSPFMAFAAPAPAGFPDLGSCDWHIEMSKIPNSSTQNNPIVTNSVKPNSQQFVPHLSSITLDENVSSGGDYIGTIQWTSPPSDSGGANTNFWKIPDYGSSLAEASQLAPAVYPPGFNEVIVYFMASIPGPNQSGSPNLVPCLLPQEYITHFISEQAPIQGEAALLHYVDPDTNRNLGEFKLYPGGYLTCVPNSSSTGPQQLPLDGVFVFASWVSRFYQLKPVGTAGPARGRLGVRR
VH,SARAH C 178 Chiba Virus , Homo Sapiens GSSGSSGEVQLVESGAEVKKPGASVKVSCKASGYTFTSLYMHWVRQAPGQGLEWMGMINPSGGGTWNAQKFQGRVTMTRDTSTSTVYMELRSLRSDDTAMYYCARDSDQYSQGLGYWGQGTLVTVCSGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAIEAK
VH,SARAH E 178 Chiba Virus , Homo Sapiens GSSGSSGEVQLVESGAEVKKPGASVKVSCKASGYTFTSLYMHWVRQAPGQGLEWMGMINPSGGGTWNAQKFQGRVTMTRDTSTSTVYMELRSLRSDDTAMYYCARDSDQYSQGLGYWGQGTLVTVCSGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAIEAK
VL,SARAH D 169 Chiba Virus , Homo Sapiens GSSGSSGQSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSKRPSGVSNRFSGSKSGNTASLTISGLQAKDEADYYCSSYTSSSTWVFGGGTKLTVLGGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQCKRQPILDAIEAK
VL,SARAH F 169 Chiba Virus , Homo Sapiens GSSGSSGQSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSKRPSGVSNRFSGSKSGNTASLTISGLQAKDEADYYCSSYTSSSTWVFGGGTKLTVLGGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQCKRQPILDAIEAK
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-05-19
Deposition Author(s): Hosaka, T. , Katsura, K. , Kimura-Someya, T. , Shirouzu, M. , Someya, Y.