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8JAM

Cryo-em structure of omicron ba.1 rbd in complex with w328-6h2 (local refinement)

PDB DOI: 10.2210/pdb8jam/pdb

Classification: VIRAL PROTEIN
Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome-Related Coronavirus

Deposited: 2023-05-06
Deposition Author(s): Li, Y.J. , Nan, X.Y.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.92 Å

8jam
Literature

Cryo-em structure of omicron ba.1 rbd in complex with w328-6h2 (local refinement)

Li, Y.J. , Nan, X.Y.

Primary Citation of Related Structures: 8JAM


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike glycoprotein B 1274 Homo Sapiens , Severe Acute Respiratory Syndrome-Related Coronavirus MFVFLVLLPLVSSQCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHVISGTNGTKRFDNPVLPFNDGVYFASIEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLDHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPIIVREPEDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCYFPLRSYSFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLKGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEYVNNSYECDIPIGAGICASYQTQTKSHSGAGSVASQSIIAYTMSLGAENSVACSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLKRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKYFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFKGLTVLPPLLTDEMIAQYTSALLAGTICSGWTFGAGPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDVVNHNAQALNTLVKQLSSKFGAISSVLNDIFSRLDKPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGRSLEVLFQGPGSGGLNDIFEAQKIEWHEGSGHHHHHHHH
H chain of W328-6H2 H 107 Homo Sapiens , Severe Acute Respiratory Syndrome-Related Coronavirus QVQLVQSGSELKKPGASVTVSCKASGYSFPTHAMNWVRQAPGQGLEWMGWIPTYAGFTGRFVFSLDTSVSTAYLQISSLKADDTAVYYCARGHVLEWFQGTLVTVSS
L chain of W328-6H2 L 112 Homo Sapiens , Severe Acute Respiratory Syndrome-Related Coronavirus DVVMTQSPLSLSVTPGQPASISCKSSQTLLHSDGQTSFYWYLQKPGQSPQLLIYDISSRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTQFPWTFGQGTKVEIK
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-05-06
Deposition Author(s): Li, Y.J. , Nan, X.Y.