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FASTA Sequence PDB Format mmCIF Format
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8JAG

Cryo-em structure of sars-cov-1 rbd in complex with w328-6h2 (local refinement)

PDB DOI: 10.2210/pdb8jag/pdb

Classification: VIRAL PROTEIN
Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome-Related Coronavirus

Deposited: 2023-05-06
Deposition Author(s): Li, Y.J. , Nan, X.Y.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.55 Å

8jag
Literature

Cryo-em structure of sars-cov-1 rbd in complex with w328-6h2 (local refinement)

Li, Y.J. , Nan, X.Y.

Primary Citation of Related Structures: 8JAG


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike glycoprotein A 1255 Homo Sapiens , Severe Acute Respiratory Syndrome-Related Coronavirus MFIFLLFLTLTSGSDLDRCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGLIAIVMVTILLCCMTSCCSCLKGACSCGSCCKFDEDDSEPVLKGVKLHYT
H chain of 6H2 Fab region H 107 Homo Sapiens , Severe Acute Respiratory Syndrome-Related Coronavirus QVQLVQSGSELKKPGASVTVSCKASGYSFPTHAMNWVRQAPGQGLEWMGWIPTYAGFTGRFVFSLDTSVSTAYLQISSLKADDTAVYYCARGHVLEWFQGTLVTVSS
L chain of 6H2 Fab region L 112 Homo Sapiens , Severe Acute Respiratory Syndrome-Related Coronavirus DVVMTQSPLSLSVTPGQPASISCKSSQTLLHSDGQTSFYWYLQKPGQSPQLLIYDISSRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTQFPWTFGQGTKVEIK
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-05-06
Deposition Author(s): Li, Y.J. , Nan, X.Y.