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FASTA Sequence PDB Format mmCIF Format
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8J8H

Sparta monomer bound with guide-target, state 2

PDB DOI: 10.2210/pdb8j8h/pdb

Classification: DNA BINDING PROTEIN/DNA/RNA
Organism(s): Thermoflavifilum Thermophilum , Synthetic Construct

Deposited: 2023-05-01
Deposition Author(s): Chen, M.R. , Guo, L.J. , Huang, P.P. , Li, Z.X. , Xiao, Y.B.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.4 Å

8j8h
Literature

Sparta monomer bound with guide-target, state 2

Chen, M.R. , Guo, L.J. , Huang, P.P. , Li, Z.X. , Xiao, Y.B.

Primary Citation of Related Structures: 8J8H


Proteins
Molecule Chains Sequence Length Organism Sequence
Piwi domain-containing protein A 541 Thermoflavifilum Thermophilum , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSMKELIYIEEPSILFAHGQKCTDPRDGLALFGPLNQIYGIKSGVVGTQKGLQIFKSYLDKIQKPIYNHNNITRPMFPGFEAVFGCKWESQNIVFKEITDEEIRRYLFNASTHKRTYDLVTLFNDKIITANKNDEERVDVWFVIVPEEIYKYCRPNSVLPNELVQTKSLISKSKAKSFRYTPTLFEEFNKKLKEVEKEAKTYNYDAQFHDQLKARLLEHTIPTQILRESTLAWRDFKNTFGAPIRDFSKIEGHLAWTISTAAYYKAGGKPWKLGDIRPGVCYLGLVYKKIEKSKNPQNACCAAQMFLDNGDGTVFKGEVGPWYNPEKGEYHLKPKEAKALLTQALESYKEQNKSYPKEVFIHARTRFNDEEWNAFNEVTPKNTNLVGVTITKSKPLKLYKTEGAFPIMRGNAYIVDEKKAFLWTLGFVPKLQSTLSMEVPNPIFIEINKGEAEIQQVLKDILALTKLNYNACIYADGEPVTLRFANKIGEILTASTEIKTPPLAFKYYI
TIR domain-containing protein B 484 Thermoflavifilum Thermophilum , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSMRNKIFISHATPEDDDFTRWLSLKLIGLGYEVWCDILFLDKGVDFWSTIEKEIRENTCKFLIVSSTAGNKREGVLKELAVATKVKKHLQDDMFIIPLAIDENLSYDDINIEIVRLNAIDFKKSWAKGLQDLLDAFEKQNVPKKPPDHSKSNLLYQQIFLHDKQAIEKEETYDSNWFPIISFPNELRFHRYDWRLPKQFDVRTLAFPAIRYKEYLCTFAWEYDFIHQLPKTETYNGQESIRISTSDILSGRYDTDFIRNYECQRLIVQLINKAFELRMKDKNVREYQMSKTFAYWIEKGKLEKDKFEKIKLVGKQKNKYWHFGISAAGKLYPSPVLMVSSHIIFTMDGINLIKSKSIQHSSRRKQGKNWWNDKWREKLLAFIRFLSDDQNAIYLNVGSEEKILISNKPLKFFGKMSYVTPSEVTLEEESVLADINNFEEDTEDLDELEDIE

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(P*UP*GP*AP*CP*GP*GP*CP*UP*CP*UP*AP*AP*UP*CP*UP*AP*UP*UP*AP*GP*U)-3') e 21 NA UGACGGCUCUAAUCUAUUAGU
DNA (25-MER) f 25 NA CAACTAATAGATTAGAGCCGTCAAT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-05-01
Deposition Author(s): Chen, M.R. , Guo, L.J. , Huang, P.P. , Li, Z.X. , Xiao, Y.B.