8J5O
Cryo-em structure of native rc-lh complex from roseiflexus castenholzii at 100lux
PDB DOI: 10.2210/pdb8j5o/pdb
Classification: PHOTOSYNTHESIS Organism(s): Roseiflexus Castenholzii Dsm 13941
Deposited: 2023-04-24 Deposition Author(s): Xin, J. , Xu, X.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.9 Å
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Beta subunit of light-harvesting 1 | 0 | 55 | Roseiflexus Castenholzii Dsm 13941 | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | 2 | 55 | Roseiflexus Castenholzii Dsm 13941 | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | 4 | 55 | Roseiflexus Castenholzii Dsm 13941 | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | 6 | 55 | Roseiflexus Castenholzii Dsm 13941 | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | 8 | 55 | Roseiflexus Castenholzii Dsm 13941 | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | B | 55 | Roseiflexus Castenholzii Dsm 13941 | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | E | 55 | Roseiflexus Castenholzii Dsm 13941 | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | G | 55 | Roseiflexus Castenholzii Dsm 13941 | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | I | 55 | Roseiflexus Castenholzii Dsm 13941 | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | K | 55 | Roseiflexus Castenholzii Dsm 13941 | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | O | 55 | Roseiflexus Castenholzii Dsm 13941 | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | Q | 55 | Roseiflexus Castenholzii Dsm 13941 | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | S | 55 | Roseiflexus Castenholzii Dsm 13941 | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | U | 55 | Roseiflexus Castenholzii Dsm 13941 | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | W | 55 | Roseiflexus Castenholzii Dsm 13941 | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Alpha subunit of light-harvesting 1 | 1 | 42 | Roseiflexus Castenholzii Dsm 13941 | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | 3 | 42 | Roseiflexus Castenholzii Dsm 13941 | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | 5 | 42 | Roseiflexus Castenholzii Dsm 13941 | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | 7 | 42 | Roseiflexus Castenholzii Dsm 13941 | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | 9 | 42 | Roseiflexus Castenholzii Dsm 13941 | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | A | 42 | Roseiflexus Castenholzii Dsm 13941 | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | D | 42 | Roseiflexus Castenholzii Dsm 13941 | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | F | 42 | Roseiflexus Castenholzii Dsm 13941 | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | H | 42 | Roseiflexus Castenholzii Dsm 13941 | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | J | 42 | Roseiflexus Castenholzii Dsm 13941 | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | N | 42 | Roseiflexus Castenholzii Dsm 13941 | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | P | 42 | Roseiflexus Castenholzii Dsm 13941 | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | R | 42 | Roseiflexus Castenholzii Dsm 13941 | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | T | 42 | Roseiflexus Castenholzii Dsm 13941 | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | V | 42 | Roseiflexus Castenholzii Dsm 13941 | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| MULTIHEME_CYTC DOMAIN-CONTAINING PROTEIN | C | 320 | Roseiflexus Castenholzii Dsm 13941 | MIQQPPTLFPEITNTVRGRFYIVAGIISVVMAVASIAIFWWIFYTITPAPAPPLQNPIYVNYTQEPTDYISAESLAAMNAYIQANPQPQAVQVLKGMTTAQISAYMVAQVSGGLKVDCSYCHNIANFAQQDGYPNAAKKVTARKMMLMSADLNQNYTAKLPASVGGYQITCATCHNGKAAGLEPYPIEIMNTLPNDWRLPLELDYPGGLVVTGRKDVSNHEVEQNQFAMYHMNVSMGQGCTFCHNARYFPSYEIAQKNHSIIMLQMTKHIQETYVAPGGRIADGIMAGKSPSCWLCHQGANIPPGAAKPGQVPAVLSSTP |
| Reaction center protein L chain | L | 315 | Roseiflexus Castenholzii Dsm 13941 | MSAVPRALPLPSGETLPAEAISSTGSQAASAEVIPFSIIEEFYKRPGKTLAARFFGVDPFDFWIGRFYVGLFGAISIIGIILGVAFYLYEGVVNEGTLNILAMRIEPPPVSQGLNVDPAQPGFFWFLTMVAATIAFVGWLLRQIDISLKLDMGMEVPIAFGAVVSSWITLQWLRPIAMGAWGHGFPLGITHHLDWVSNIGYQYYNFFYNPFHAIGITLLFASTLFLHMHGSAVLSEAKRNISDQNIHVFWRNILGYSIGEIGIHRVAFWTGAASVLFSNLCIFLSGTFVKDWNAFWGFWDKMPIWNGVGQGALVA |
| Reaction center protein M chain | M | 307 | Roseiflexus Castenholzii Dsm 13941 | PIDLHDEEYRDGLEGTIAKPPGHVGWMQRLLGEGQVGPIYVGLWGVISFITFFASAFIILVDYGRQVGWNPIIYLREFWNLAVYPPPTEYGLSWNVPWDKGGAWLAATFFLHISVLTWWARLYTRAKATGVGTQLAWGFASALSLYFVIYLFHPLALGNWSAAPGHGFRAILDWTNYVSIHWGNFYYNPFHMLSIFFLLGSTLLLAMHGATIVATSKWKSEMEFTEMMAEGPGTQRAQLFWRWVMGWNANSYNIHIWAWWFAAFTAITGAIGLFLSGTLVPDWYAWGETAKIVAPWPNPDWAQYVFR |
| Subunit X | X | 32 | Roseiflexus Castenholzii Dsm 13941 | MAPFLMAFFTIVLIVATLYFLSMIMSGKPESR |
| Subunit Y | Y | 39 | Roseiflexus Castenholzii Dsm 13941 | MNWIVATFMLMFVLVAFLPLVVSLAYTWVTNPETQSTEE |
| Subunit Z | Z | 63 | Roseiflexus Castenholzii Dsm 13941 | MDFLILLQAEPSPWPVWSGYALCFVPLAAVILGFIIAARFTDKQATSAYLRLDPAKANEPEQG |
Experimental Data
Method: ELECTRON MICROSCOPY