8J3S
Complex structure of human cytomegalovirus protease and a macrocyclic peptide ligand
PDB DOI: 10.2210/pdb8j3s/pdb
Classification: HYDROLASE Organism(s): Human Betaherpesvirus 5 , Synthetic Construct
Deposited: 2023-04-18 Deposition Author(s): Ichihashi, Y. , Kato, T. , Kozono, I. , Nakahashi, A. , Nikaido, E. , Nishikawa, J. , Onishi, M. , Sako, Y. , Tachibana, Y. , Ueda, T. , Yamatsu, Y. , Yoshida, S.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.09 Å
Complex structure of human cytomegalovirus protease and a macrocyclic peptide ligand
Ichihashi, Y. , Kato, T. , Kozono, I. , Nakahashi, A. , Nikaido, E. , Nishikawa, J. , Onishi, M. , Sako, Y. , Tachibana, Y. , Ueda, T. , Yamatsu, Y. , Yoshida, S.
Primary Citation of Related Structures: 8J3S
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Assemblin | A | 263 | Human Betaherpesvirus 5 , Synthetic Construct | MHHHHHHMTMDEQQPQAVTPVYVGGFLARYDQSPDEAELLLPRDVVEHWLHAQGQGQPSLSVALPLNINHDDTAVVGHVAAMQSVRDGLFCLGCVTSPRFLEIVRRASEKSELVSRGPVSPLQPDKVVEFLSGSYAGLSLSSRRCDDVEQATSLSGSETTPFKHVALCSVGRRRGTLAVYGRDPEWVTQRFPDLTAADRDGLRAQWQRCGSTAVDASGDPFRSDSYGLLGNSVDALYIRERLPKLRYDKQLVGVTERESYVKA |
| Assemblin | B | 263 | Human Betaherpesvirus 5 , Synthetic Construct | MHHHHHHMTMDEQQPQAVTPVYVGGFLARYDQSPDEAELLLPRDVVEHWLHAQGQGQPSLSVALPLNINHDDTAVVGHVAAMQSVRDGLFCLGCVTSPRFLEIVRRASEKSELVSRGPVSPLQPDKVVEFLSGSYAGLSLSSRRCDDVEQATSLSGSETTPFKHVALCSVGRRRGTLAVYGRDPEWVTQRFPDLTAADRDGLRAQWQRCGSTAVDASGDPFRSDSYGLLGNSVDALYIRERLPKLRYDKQLVGVTERESYVKA |
| Assemblin | C | 263 | Human Betaherpesvirus 5 , Synthetic Construct | MHHHHHHMTMDEQQPQAVTPVYVGGFLARYDQSPDEAELLLPRDVVEHWLHAQGQGQPSLSVALPLNINHDDTAVVGHVAAMQSVRDGLFCLGCVTSPRFLEIVRRASEKSELVSRGPVSPLQPDKVVEFLSGSYAGLSLSSRRCDDVEQATSLSGSETTPFKHVALCSVGRRRGTLAVYGRDPEWVTQRFPDLTAADRDGLRAQWQRCGSTAVDASGDPFRSDSYGLLGNSVDALYIRERLPKLRYDKQLVGVTERESYVKA |
| Assemblin | D | 263 | Human Betaherpesvirus 5 , Synthetic Construct | MHHHHHHMTMDEQQPQAVTPVYVGGFLARYDQSPDEAELLLPRDVVEHWLHAQGQGQPSLSVALPLNINHDDTAVVGHVAAMQSVRDGLFCLGCVTSPRFLEIVRRASEKSELVSRGPVSPLQPDKVVEFLSGSYAGLSLSSRRCDDVEQATSLSGSETTPFKHVALCSVGRRRGTLAVYGRDPEWVTQRFPDLTAADRDGLRAQWQRCGSTAVDASGDPFRSDSYGLLGNSVDALYIRERLPKLRYDKQLVGVTERESYVKA |
| PHE-ILE-THR-GLY-HIS-TYR-TRP-VAL-ARG-PHE-LEU-PRO-CYS-GLY | E | 13 | Human Betaherpesvirus 5 , Synthetic Construct | FITGHYWVRFLPC |
| PHE-ILE-THR-GLY-HIS-TYR-TRP-VAL-ARG-PHE-LEU-PRO-CYS-GLY | F | 13 | Human Betaherpesvirus 5 , Synthetic Construct | FITGHYWVRFLPC |
| PHE-ILE-THR-GLY-HIS-TYR-TRP-VAL-ARG-PHE-LEU-PRO-CYS-GLY | G | 13 | Human Betaherpesvirus 5 , Synthetic Construct | FITGHYWVRFLPC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2023-04-18 Deposition Author(s): Ichihashi, Y. , Kato, T. , Kozono, I. , Nakahashi, A. , Nikaido, E. , Nishikawa, J. , Onishi, M. , Sako, Y. , Tachibana, Y. , Ueda, T. , Yamatsu, Y. , Yoshida, S.