8IV4
Cryo-em structure of sars-cov-2 spike protein in complex with double nabs 8h12 and 3e2 (local refinement)
PDB DOI: 10.2210/pdb8iv4/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Mus Musculus , Severe Acute Respiratory Syndrome Coronavirus 2
Deposited: 2023-03-26 Deposition Author(s): Jiang, Y. , Li, S. , Sun, H. , Xia, N. , Zheng, Q.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.59 Å
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| light chain of 3E2 | L | 104 | Mus Musculus , Severe Acute Respiratory Syndrome Coronavirus 2 | QIVLTQSPAIMSASLGEEITLTCSVSSSVSDMHWYQQKSGTSPKVFIYSTSNLASGVPSRFSGSGSGTFYSLTISSVEAEDAAYYYCHQWSSWTFGGGTKLEIK |
| heavy chain of 3E2 | H | 121 | Mus Musculus , Severe Acute Respiratory Syndrome Coronavirus 2 | EVMLVESGGGVVKPGGSLKLSCAASGFSFSTYAMSWIRQTPEKSLEWVAAISSGGTNTYYPGSVKGRFTISRDKAMNTLYLQLSSLRSEDTAMYYCVRHSGNYVDSVMDYWGQGTSVTVSS |
| light chain of 8H12 | B | 107 | Mus Musculus , Severe Acute Respiratory Syndrome Coronavirus 2 | DIVMTQFQKFMSTSVGDRVSITCKASQNVRTAVAWYQQKPGQSPKAMIYLASNRHRGVPDRFTGSGCGTDFTLTISNVQCEDLADYFCLQHRNYPLTFGGGTKLEIK |
| heavy chain of 8H12 | A | 119 | Mus Musculus , Severe Acute Respiratory Syndrome Coronavirus 2 | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAQIRRKANNHATYYAESVKGRFTISRDDSKSSVYLQMNSLRAEDTGIYYCIRGMTYAMDFWGQGTSVTVSS |
| Spike protein S1 | G | 204 | Mus Musculus , Severe Acute Respiratory Syndrome Coronavirus 2 | ESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP |
Experimental Data
Method: ELECTRON MICROSCOPY