PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8IQI

Structure of full-length asfvprimpol in complex-form

PDB DOI: 10.2210/pdb8iqi/pdb

Classification: DNA BINDING PROTEIN
Organism(s): African Swine Fever Virus Ba71V , Synthetic Construct

Deposited: 2023-03-16
Deposition Author(s): Gan, J.H. , Shao, Z.W. , Su, S.C.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.32 Å

8iqi
Literature

Structure of full-length asfvprimpol in complex-form

Gan, J.H. , Shao, Z.W. , Su, S.C.

Primary Citation of Related Structures: 8IQI


Proteins
Molecule Chains Sequence Length Organism Sequence
Putative primase C962R A 964 African Swine Fever Virus Ba71V , Synthetic Construct GSMREESWEEHDTIQLTAQRKYLAEVQALETLLARELSVFLTEPGSKKTNIINRITGKTYALPSTELLRFYEHLEQCRKQGALMYFLERQGTYSGLMLDYDLKLNTNAAPSLESSVLSRLCHRIFVHIKNSSVLPEGSHKIHFFFTLKPEAVQGKYGFHVLIPGLKMAASTKKSIIASLQHDATVQKILHEQGVANPESCLDPHSASVPSLLYGSSKLNHRPYQLKTGFELVFDSSDPDYIPIHQIKNIESYNLVSELSLTNEQGSLVRPVYCAADIAAEKEEEIPADDHSLSILMLHDPEARYLHKILNLLPPEYYVEYPLWSNVVFALANTSANYRPLAEWFSQKCPEKWNTGGKEKLEKLWNDASRHTEKKITKRSIMYWAHKHAPQQYKEIVEQGYFSILAEYVYSYNGTLEHYMIAKVIYAMMGNKFVVDVDSNGKYVWFEFVLPGQPMNQGEIWKWRKEVNPDELHIYISENFSRVMDRITEHIKYHLSQPHETNILNYYKKLLKAFERSKSKIFNDSFKKGVIRQAEFLFRQRSFIQTLDTNPYLLGVGNGVLSIETIPAKLINHFHEHPIHQYTHICYEPFNPENPWTKLLLNALQDIIPELDARLWIMFYLSTAIFRGLKEALMLLWLGGGCNGKTFLMRLVAMVLGDHYASKLNISLLTSYRETAEKPNSAFMRLKGRGYGYFEETNKSEILNTSRLKEMVNPGDVTARELNQKQESFQMTATMVAASNYNFIIDTTDHGTWRRLRHYRSKVKFCHNPDPNNSYEKKEDPRFIHEYIMDPNCQNAFFSILVYFWEKLQKEYNGQIKKVFCPTIESETEAYRKSQDTLHRFITERVVESPSAETVYNLSEVVTAYAEWYNANINVKRHIALELSQELENSVLEKYLQWSPNKTRILKGCRILHKFETLQPGESYIGVSSTGTLLNTPICEPKNKWWEWSPNPSAPPEKEASAPTP
Putative primase C962R B 964 African Swine Fever Virus Ba71V , Synthetic Construct GSMREESWEEHDTIQLTAQRKYLAEVQALETLLARELSVFLTEPGSKKTNIINRITGKTYALPSTELLRFYEHLEQCRKQGALMYFLERQGTYSGLMLDYDLKLNTNAAPSLESSVLSRLCHRIFVHIKNSSVLPEGSHKIHFFFTLKPEAVQGKYGFHVLIPGLKMAASTKKSIIASLQHDATVQKILHEQGVANPESCLDPHSASVPSLLYGSSKLNHRPYQLKTGFELVFDSSDPDYIPIHQIKNIESYNLVSELSLTNEQGSLVRPVYCAADIAAEKEEEIPADDHSLSILMLHDPEARYLHKILNLLPPEYYVEYPLWSNVVFALANTSANYRPLAEWFSQKCPEKWNTGGKEKLEKLWNDASRHTEKKITKRSIMYWAHKHAPQQYKEIVEQGYFSILAEYVYSYNGTLEHYMIAKVIYAMMGNKFVVDVDSNGKYVWFEFVLPGQPMNQGEIWKWRKEVNPDELHIYISENFSRVMDRITEHIKYHLSQPHETNILNYYKKLLKAFERSKSKIFNDSFKKGVIRQAEFLFRQRSFIQTLDTNPYLLGVGNGVLSIETIPAKLINHFHEHPIHQYTHICYEPFNPENPWTKLLLNALQDIIPELDARLWIMFYLSTAIFRGLKEALMLLWLGGGCNGKTFLMRLVAMVLGDHYASKLNISLLTSYRETAEKPNSAFMRLKGRGYGYFEETNKSEILNTSRLKEMVNPGDVTARELNQKQESFQMTATMVAASNYNFIIDTTDHGTWRRLRHYRSKVKFCHNPDPNNSYEKKEDPRFIHEYIMDPNCQNAFFSILVYFWEKLQKEYNGQIKKVFCPTIESETEAYRKSQDTLHRFITERVVESPSAETVYNLSEVVTAYAEWYNANINVKRHIALELSQELENSVLEKYLQWSPNKTRILKGCRILHKFETLQPGESYIGVSSTGTLLNTPICEPKNKWWEWSPNPSAPPEKEASAPTP
Putative primase C962R C 964 African Swine Fever Virus Ba71V , Synthetic Construct GSMREESWEEHDTIQLTAQRKYLAEVQALETLLARELSVFLTEPGSKKTNIINRITGKTYALPSTELLRFYEHLEQCRKQGALMYFLERQGTYSGLMLDYDLKLNTNAAPSLESSVLSRLCHRIFVHIKNSSVLPEGSHKIHFFFTLKPEAVQGKYGFHVLIPGLKMAASTKKSIIASLQHDATVQKILHEQGVANPESCLDPHSASVPSLLYGSSKLNHRPYQLKTGFELVFDSSDPDYIPIHQIKNIESYNLVSELSLTNEQGSLVRPVYCAADIAAEKEEEIPADDHSLSILMLHDPEARYLHKILNLLPPEYYVEYPLWSNVVFALANTSANYRPLAEWFSQKCPEKWNTGGKEKLEKLWNDASRHTEKKITKRSIMYWAHKHAPQQYKEIVEQGYFSILAEYVYSYNGTLEHYMIAKVIYAMMGNKFVVDVDSNGKYVWFEFVLPGQPMNQGEIWKWRKEVNPDELHIYISENFSRVMDRITEHIKYHLSQPHETNILNYYKKLLKAFERSKSKIFNDSFKKGVIRQAEFLFRQRSFIQTLDTNPYLLGVGNGVLSIETIPAKLINHFHEHPIHQYTHICYEPFNPENPWTKLLLNALQDIIPELDARLWIMFYLSTAIFRGLKEALMLLWLGGGCNGKTFLMRLVAMVLGDHYASKLNISLLTSYRETAEKPNSAFMRLKGRGYGYFEETNKSEILNTSRLKEMVNPGDVTARELNQKQESFQMTATMVAASNYNFIIDTTDHGTWRRLRHYRSKVKFCHNPDPNNSYEKKEDPRFIHEYIMDPNCQNAFFSILVYFWEKLQKEYNGQIKKVFCPTIESETEAYRKSQDTLHRFITERVVESPSAETVYNLSEVVTAYAEWYNANINVKRHIALELSQELENSVLEKYLQWSPNKTRILKGCRILHKFETLQPGESYIGVSSTGTLLNTPICEPKNKWWEWSPNPSAPPEKEASAPTP
Putative primase C962R D 964 African Swine Fever Virus Ba71V , Synthetic Construct GSMREESWEEHDTIQLTAQRKYLAEVQALETLLARELSVFLTEPGSKKTNIINRITGKTYALPSTELLRFYEHLEQCRKQGALMYFLERQGTYSGLMLDYDLKLNTNAAPSLESSVLSRLCHRIFVHIKNSSVLPEGSHKIHFFFTLKPEAVQGKYGFHVLIPGLKMAASTKKSIIASLQHDATVQKILHEQGVANPESCLDPHSASVPSLLYGSSKLNHRPYQLKTGFELVFDSSDPDYIPIHQIKNIESYNLVSELSLTNEQGSLVRPVYCAADIAAEKEEEIPADDHSLSILMLHDPEARYLHKILNLLPPEYYVEYPLWSNVVFALANTSANYRPLAEWFSQKCPEKWNTGGKEKLEKLWNDASRHTEKKITKRSIMYWAHKHAPQQYKEIVEQGYFSILAEYVYSYNGTLEHYMIAKVIYAMMGNKFVVDVDSNGKYVWFEFVLPGQPMNQGEIWKWRKEVNPDELHIYISENFSRVMDRITEHIKYHLSQPHETNILNYYKKLLKAFERSKSKIFNDSFKKGVIRQAEFLFRQRSFIQTLDTNPYLLGVGNGVLSIETIPAKLINHFHEHPIHQYTHICYEPFNPENPWTKLLLNALQDIIPELDARLWIMFYLSTAIFRGLKEALMLLWLGGGCNGKTFLMRLVAMVLGDHYASKLNISLLTSYRETAEKPNSAFMRLKGRGYGYFEETNKSEILNTSRLKEMVNPGDVTARELNQKQESFQMTATMVAASNYNFIIDTTDHGTWRRLRHYRSKVKFCHNPDPNNSYEKKEDPRFIHEYIMDPNCQNAFFSILVYFWEKLQKEYNGQIKKVFCPTIESETEAYRKSQDTLHRFITERVVESPSAETVYNLSEVVTAYAEWYNANINVKRHIALELSQELENSVLEKYLQWSPNKTRILKGCRILHKFETLQPGESYIGVSSTGTLLNTPICEPKNKWWEWSPNPSAPPEKEASAPTP
Putative primase C962R E 964 African Swine Fever Virus Ba71V , Synthetic Construct GSMREESWEEHDTIQLTAQRKYLAEVQALETLLARELSVFLTEPGSKKTNIINRITGKTYALPSTELLRFYEHLEQCRKQGALMYFLERQGTYSGLMLDYDLKLNTNAAPSLESSVLSRLCHRIFVHIKNSSVLPEGSHKIHFFFTLKPEAVQGKYGFHVLIPGLKMAASTKKSIIASLQHDATVQKILHEQGVANPESCLDPHSASVPSLLYGSSKLNHRPYQLKTGFELVFDSSDPDYIPIHQIKNIESYNLVSELSLTNEQGSLVRPVYCAADIAAEKEEEIPADDHSLSILMLHDPEARYLHKILNLLPPEYYVEYPLWSNVVFALANTSANYRPLAEWFSQKCPEKWNTGGKEKLEKLWNDASRHTEKKITKRSIMYWAHKHAPQQYKEIVEQGYFSILAEYVYSYNGTLEHYMIAKVIYAMMGNKFVVDVDSNGKYVWFEFVLPGQPMNQGEIWKWRKEVNPDELHIYISENFSRVMDRITEHIKYHLSQPHETNILNYYKKLLKAFERSKSKIFNDSFKKGVIRQAEFLFRQRSFIQTLDTNPYLLGVGNGVLSIETIPAKLINHFHEHPIHQYTHICYEPFNPENPWTKLLLNALQDIIPELDARLWIMFYLSTAIFRGLKEALMLLWLGGGCNGKTFLMRLVAMVLGDHYASKLNISLLTSYRETAEKPNSAFMRLKGRGYGYFEETNKSEILNTSRLKEMVNPGDVTARELNQKQESFQMTATMVAASNYNFIIDTTDHGTWRRLRHYRSKVKFCHNPDPNNSYEKKEDPRFIHEYIMDPNCQNAFFSILVYFWEKLQKEYNGQIKKVFCPTIESETEAYRKSQDTLHRFITERVVESPSAETVYNLSEVVTAYAEWYNANINVKRHIALELSQELENSVLEKYLQWSPNKTRILKGCRILHKFETLQPGESYIGVSSTGTLLNTPICEPKNKWWEWSPNPSAPPEKEASAPTP
Putative primase C962R F 964 African Swine Fever Virus Ba71V , Synthetic Construct GSMREESWEEHDTIQLTAQRKYLAEVQALETLLARELSVFLTEPGSKKTNIINRITGKTYALPSTELLRFYEHLEQCRKQGALMYFLERQGTYSGLMLDYDLKLNTNAAPSLESSVLSRLCHRIFVHIKNSSVLPEGSHKIHFFFTLKPEAVQGKYGFHVLIPGLKMAASTKKSIIASLQHDATVQKILHEQGVANPESCLDPHSASVPSLLYGSSKLNHRPYQLKTGFELVFDSSDPDYIPIHQIKNIESYNLVSELSLTNEQGSLVRPVYCAADIAAEKEEEIPADDHSLSILMLHDPEARYLHKILNLLPPEYYVEYPLWSNVVFALANTSANYRPLAEWFSQKCPEKWNTGGKEKLEKLWNDASRHTEKKITKRSIMYWAHKHAPQQYKEIVEQGYFSILAEYVYSYNGTLEHYMIAKVIYAMMGNKFVVDVDSNGKYVWFEFVLPGQPMNQGEIWKWRKEVNPDELHIYISENFSRVMDRITEHIKYHLSQPHETNILNYYKKLLKAFERSKSKIFNDSFKKGVIRQAEFLFRQRSFIQTLDTNPYLLGVGNGVLSIETIPAKLINHFHEHPIHQYTHICYEPFNPENPWTKLLLNALQDIIPELDARLWIMFYLSTAIFRGLKEALMLLWLGGGCNGKTFLMRLVAMVLGDHYASKLNISLLTSYRETAEKPNSAFMRLKGRGYGYFEETNKSEILNTSRLKEMVNPGDVTARELNQKQESFQMTATMVAASNYNFIIDTTDHGTWRRLRHYRSKVKFCHNPDPNNSYEKKEDPRFIHEYIMDPNCQNAFFSILVYFWEKLQKEYNGQIKKVFCPTIESETEAYRKSQDTLHRFITERVVESPSAETVYNLSEVVTAYAEWYNANINVKRHIALELSQELENSVLEKYLQWSPNKTRILKGCRILHKFETLQPGESYIGVSSTGTLLNTPICEPKNKWWEWSPNPSAPPEKEASAPTP

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (32-MER) g 32 NA TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-03-16
Deposition Author(s): Gan, J.H. , Shao, Z.W. , Su, S.C.