Structure of full-length asfvprimpol in complex-form
PDB DOI: 10.2210/pdb8iqi/pdb
Classification: DNA BINDING PROTEIN Organism(s): African Swine Fever Virus Ba71V , Synthetic Construct
Deposited: 2023-03-16 Deposition Author(s): Gan, J.H. , Shao, Z.W. , Su, S.C.
Method: ELECTRON MICROSCOPY Resolution: 3.32 Å
Structure of full-length asfvprimpol in complex-form
Gan, J.H. , Shao, Z.W. , Su, S.C.
Primary Citation of Related Structures: 8IQI
Proteins | ||||
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Molecule | Chains | Sequence Length | Organism | Sequence |
Putative primase C962R | A | 964 | African Swine Fever Virus Ba71V , Synthetic Construct | GSMREESWEEHDTIQLTAQRKYLAEVQALETLLARELSVFLTEPGSKKTNIINRITGKTYALPSTELLRFYEHLEQCRKQGALMYFLERQGTYSGLMLDYDLKLNTNAAPSLESSVLSRLCHRIFVHIKNSSVLPEGSHKIHFFFTLKPEAVQGKYGFHVLIPGLKMAASTKKSIIASLQHDATVQKILHEQGVANPESCLDPHSASVPSLLYGSSKLNHRPYQLKTGFELVFDSSDPDYIPIHQIKNIESYNLVSELSLTNEQGSLVRPVYCAADIAAEKEEEIPADDHSLSILMLHDPEARYLHKILNLLPPEYYVEYPLWSNVVFALANTSANYRPLAEWFSQKCPEKWNTGGKEKLEKLWNDASRHTEKKITKRSIMYWAHKHAPQQYKEIVEQGYFSILAEYVYSYNGTLEHYMIAKVIYAMMGNKFVVDVDSNGKYVWFEFVLPGQPMNQGEIWKWRKEVNPDELHIYISENFSRVMDRITEHIKYHLSQPHETNILNYYKKLLKAFERSKSKIFNDSFKKGVIRQAEFLFRQRSFIQTLDTNPYLLGVGNGVLSIETIPAKLINHFHEHPIHQYTHICYEPFNPENPWTKLLLNALQDIIPELDARLWIMFYLSTAIFRGLKEALMLLWLGGGCNGKTFLMRLVAMVLGDHYASKLNISLLTSYRETAEKPNSAFMRLKGRGYGYFEETNKSEILNTSRLKEMVNPGDVTARELNQKQESFQMTATMVAASNYNFIIDTTDHGTWRRLRHYRSKVKFCHNPDPNNSYEKKEDPRFIHEYIMDPNCQNAFFSILVYFWEKLQKEYNGQIKKVFCPTIESETEAYRKSQDTLHRFITERVVESPSAETVYNLSEVVTAYAEWYNANINVKRHIALELSQELENSVLEKYLQWSPNKTRILKGCRILHKFETLQPGESYIGVSSTGTLLNTPICEPKNKWWEWSPNPSAPPEKEASAPTP |
Putative primase C962R | B | 964 | African Swine Fever Virus Ba71V , Synthetic Construct | GSMREESWEEHDTIQLTAQRKYLAEVQALETLLARELSVFLTEPGSKKTNIINRITGKTYALPSTELLRFYEHLEQCRKQGALMYFLERQGTYSGLMLDYDLKLNTNAAPSLESSVLSRLCHRIFVHIKNSSVLPEGSHKIHFFFTLKPEAVQGKYGFHVLIPGLKMAASTKKSIIASLQHDATVQKILHEQGVANPESCLDPHSASVPSLLYGSSKLNHRPYQLKTGFELVFDSSDPDYIPIHQIKNIESYNLVSELSLTNEQGSLVRPVYCAADIAAEKEEEIPADDHSLSILMLHDPEARYLHKILNLLPPEYYVEYPLWSNVVFALANTSANYRPLAEWFSQKCPEKWNTGGKEKLEKLWNDASRHTEKKITKRSIMYWAHKHAPQQYKEIVEQGYFSILAEYVYSYNGTLEHYMIAKVIYAMMGNKFVVDVDSNGKYVWFEFVLPGQPMNQGEIWKWRKEVNPDELHIYISENFSRVMDRITEHIKYHLSQPHETNILNYYKKLLKAFERSKSKIFNDSFKKGVIRQAEFLFRQRSFIQTLDTNPYLLGVGNGVLSIETIPAKLINHFHEHPIHQYTHICYEPFNPENPWTKLLLNALQDIIPELDARLWIMFYLSTAIFRGLKEALMLLWLGGGCNGKTFLMRLVAMVLGDHYASKLNISLLTSYRETAEKPNSAFMRLKGRGYGYFEETNKSEILNTSRLKEMVNPGDVTARELNQKQESFQMTATMVAASNYNFIIDTTDHGTWRRLRHYRSKVKFCHNPDPNNSYEKKEDPRFIHEYIMDPNCQNAFFSILVYFWEKLQKEYNGQIKKVFCPTIESETEAYRKSQDTLHRFITERVVESPSAETVYNLSEVVTAYAEWYNANINVKRHIALELSQELENSVLEKYLQWSPNKTRILKGCRILHKFETLQPGESYIGVSSTGTLLNTPICEPKNKWWEWSPNPSAPPEKEASAPTP |
Putative primase C962R | C | 964 | African Swine Fever Virus Ba71V , Synthetic Construct | GSMREESWEEHDTIQLTAQRKYLAEVQALETLLARELSVFLTEPGSKKTNIINRITGKTYALPSTELLRFYEHLEQCRKQGALMYFLERQGTYSGLMLDYDLKLNTNAAPSLESSVLSRLCHRIFVHIKNSSVLPEGSHKIHFFFTLKPEAVQGKYGFHVLIPGLKMAASTKKSIIASLQHDATVQKILHEQGVANPESCLDPHSASVPSLLYGSSKLNHRPYQLKTGFELVFDSSDPDYIPIHQIKNIESYNLVSELSLTNEQGSLVRPVYCAADIAAEKEEEIPADDHSLSILMLHDPEARYLHKILNLLPPEYYVEYPLWSNVVFALANTSANYRPLAEWFSQKCPEKWNTGGKEKLEKLWNDASRHTEKKITKRSIMYWAHKHAPQQYKEIVEQGYFSILAEYVYSYNGTLEHYMIAKVIYAMMGNKFVVDVDSNGKYVWFEFVLPGQPMNQGEIWKWRKEVNPDELHIYISENFSRVMDRITEHIKYHLSQPHETNILNYYKKLLKAFERSKSKIFNDSFKKGVIRQAEFLFRQRSFIQTLDTNPYLLGVGNGVLSIETIPAKLINHFHEHPIHQYTHICYEPFNPENPWTKLLLNALQDIIPELDARLWIMFYLSTAIFRGLKEALMLLWLGGGCNGKTFLMRLVAMVLGDHYASKLNISLLTSYRETAEKPNSAFMRLKGRGYGYFEETNKSEILNTSRLKEMVNPGDVTARELNQKQESFQMTATMVAASNYNFIIDTTDHGTWRRLRHYRSKVKFCHNPDPNNSYEKKEDPRFIHEYIMDPNCQNAFFSILVYFWEKLQKEYNGQIKKVFCPTIESETEAYRKSQDTLHRFITERVVESPSAETVYNLSEVVTAYAEWYNANINVKRHIALELSQELENSVLEKYLQWSPNKTRILKGCRILHKFETLQPGESYIGVSSTGTLLNTPICEPKNKWWEWSPNPSAPPEKEASAPTP |
Putative primase C962R | D | 964 | African Swine Fever Virus Ba71V , Synthetic Construct | GSMREESWEEHDTIQLTAQRKYLAEVQALETLLARELSVFLTEPGSKKTNIINRITGKTYALPSTELLRFYEHLEQCRKQGALMYFLERQGTYSGLMLDYDLKLNTNAAPSLESSVLSRLCHRIFVHIKNSSVLPEGSHKIHFFFTLKPEAVQGKYGFHVLIPGLKMAASTKKSIIASLQHDATVQKILHEQGVANPESCLDPHSASVPSLLYGSSKLNHRPYQLKTGFELVFDSSDPDYIPIHQIKNIESYNLVSELSLTNEQGSLVRPVYCAADIAAEKEEEIPADDHSLSILMLHDPEARYLHKILNLLPPEYYVEYPLWSNVVFALANTSANYRPLAEWFSQKCPEKWNTGGKEKLEKLWNDASRHTEKKITKRSIMYWAHKHAPQQYKEIVEQGYFSILAEYVYSYNGTLEHYMIAKVIYAMMGNKFVVDVDSNGKYVWFEFVLPGQPMNQGEIWKWRKEVNPDELHIYISENFSRVMDRITEHIKYHLSQPHETNILNYYKKLLKAFERSKSKIFNDSFKKGVIRQAEFLFRQRSFIQTLDTNPYLLGVGNGVLSIETIPAKLINHFHEHPIHQYTHICYEPFNPENPWTKLLLNALQDIIPELDARLWIMFYLSTAIFRGLKEALMLLWLGGGCNGKTFLMRLVAMVLGDHYASKLNISLLTSYRETAEKPNSAFMRLKGRGYGYFEETNKSEILNTSRLKEMVNPGDVTARELNQKQESFQMTATMVAASNYNFIIDTTDHGTWRRLRHYRSKVKFCHNPDPNNSYEKKEDPRFIHEYIMDPNCQNAFFSILVYFWEKLQKEYNGQIKKVFCPTIESETEAYRKSQDTLHRFITERVVESPSAETVYNLSEVVTAYAEWYNANINVKRHIALELSQELENSVLEKYLQWSPNKTRILKGCRILHKFETLQPGESYIGVSSTGTLLNTPICEPKNKWWEWSPNPSAPPEKEASAPTP |
Putative primase C962R | E | 964 | African Swine Fever Virus Ba71V , Synthetic Construct | GSMREESWEEHDTIQLTAQRKYLAEVQALETLLARELSVFLTEPGSKKTNIINRITGKTYALPSTELLRFYEHLEQCRKQGALMYFLERQGTYSGLMLDYDLKLNTNAAPSLESSVLSRLCHRIFVHIKNSSVLPEGSHKIHFFFTLKPEAVQGKYGFHVLIPGLKMAASTKKSIIASLQHDATVQKILHEQGVANPESCLDPHSASVPSLLYGSSKLNHRPYQLKTGFELVFDSSDPDYIPIHQIKNIESYNLVSELSLTNEQGSLVRPVYCAADIAAEKEEEIPADDHSLSILMLHDPEARYLHKILNLLPPEYYVEYPLWSNVVFALANTSANYRPLAEWFSQKCPEKWNTGGKEKLEKLWNDASRHTEKKITKRSIMYWAHKHAPQQYKEIVEQGYFSILAEYVYSYNGTLEHYMIAKVIYAMMGNKFVVDVDSNGKYVWFEFVLPGQPMNQGEIWKWRKEVNPDELHIYISENFSRVMDRITEHIKYHLSQPHETNILNYYKKLLKAFERSKSKIFNDSFKKGVIRQAEFLFRQRSFIQTLDTNPYLLGVGNGVLSIETIPAKLINHFHEHPIHQYTHICYEPFNPENPWTKLLLNALQDIIPELDARLWIMFYLSTAIFRGLKEALMLLWLGGGCNGKTFLMRLVAMVLGDHYASKLNISLLTSYRETAEKPNSAFMRLKGRGYGYFEETNKSEILNTSRLKEMVNPGDVTARELNQKQESFQMTATMVAASNYNFIIDTTDHGTWRRLRHYRSKVKFCHNPDPNNSYEKKEDPRFIHEYIMDPNCQNAFFSILVYFWEKLQKEYNGQIKKVFCPTIESETEAYRKSQDTLHRFITERVVESPSAETVYNLSEVVTAYAEWYNANINVKRHIALELSQELENSVLEKYLQWSPNKTRILKGCRILHKFETLQPGESYIGVSSTGTLLNTPICEPKNKWWEWSPNPSAPPEKEASAPTP |
Putative primase C962R | F | 964 | African Swine Fever Virus Ba71V , Synthetic Construct | GSMREESWEEHDTIQLTAQRKYLAEVQALETLLARELSVFLTEPGSKKTNIINRITGKTYALPSTELLRFYEHLEQCRKQGALMYFLERQGTYSGLMLDYDLKLNTNAAPSLESSVLSRLCHRIFVHIKNSSVLPEGSHKIHFFFTLKPEAVQGKYGFHVLIPGLKMAASTKKSIIASLQHDATVQKILHEQGVANPESCLDPHSASVPSLLYGSSKLNHRPYQLKTGFELVFDSSDPDYIPIHQIKNIESYNLVSELSLTNEQGSLVRPVYCAADIAAEKEEEIPADDHSLSILMLHDPEARYLHKILNLLPPEYYVEYPLWSNVVFALANTSANYRPLAEWFSQKCPEKWNTGGKEKLEKLWNDASRHTEKKITKRSIMYWAHKHAPQQYKEIVEQGYFSILAEYVYSYNGTLEHYMIAKVIYAMMGNKFVVDVDSNGKYVWFEFVLPGQPMNQGEIWKWRKEVNPDELHIYISENFSRVMDRITEHIKYHLSQPHETNILNYYKKLLKAFERSKSKIFNDSFKKGVIRQAEFLFRQRSFIQTLDTNPYLLGVGNGVLSIETIPAKLINHFHEHPIHQYTHICYEPFNPENPWTKLLLNALQDIIPELDARLWIMFYLSTAIFRGLKEALMLLWLGGGCNGKTFLMRLVAMVLGDHYASKLNISLLTSYRETAEKPNSAFMRLKGRGYGYFEETNKSEILNTSRLKEMVNPGDVTARELNQKQESFQMTATMVAASNYNFIIDTTDHGTWRRLRHYRSKVKFCHNPDPNNSYEKKEDPRFIHEYIMDPNCQNAFFSILVYFWEKLQKEYNGQIKKVFCPTIESETEAYRKSQDTLHRFITERVVESPSAETVYNLSEVVTAYAEWYNANINVKRHIALELSQELENSVLEKYLQWSPNKTRILKGCRILHKFETLQPGESYIGVSSTGTLLNTPICEPKNKWWEWSPNPSAPPEKEASAPTP |
Nucleic Acids / Hybrid | ||||
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Molecule | Chains | Sequence Length | Organism | Sequence |
DNA (32-MER) | g | 32 | NA | TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT |
Method: ELECTRON MICROSCOPY
Deposited Date: 2023-03-16 Deposition Author(s): Gan, J.H. , Shao, Z.W. , Su, S.C.