8IHO
Crystal structures of sars-cov-2 papain-like protease in complex with covalent inhibitors
PDB DOI: 10.2210/pdb8iho/pdb
Classification: VIRAL PROTEIN/INHIBITOR Organism(s): Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct
Deposited: 2023-02-23 Deposition Author(s): Hu, H. , Li, M. , Wang, Q. , Xu, Y.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.55 Å
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Papain-like protease nsp3 | A | 316 | Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct | MEVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDVFYKENSYTTTIK |
| Papain-like protease nsp3 | C | 316 | Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct | MEVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDVFYKENSYTTTIK |
| covalent inhibitor | D | 4 | Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct | XGGX |
| covalent inhibitor | E | 4 | Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct | XGGX |
Experimental Data
Method: X-RAY DIFFRACTION