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8IFK

Cryo-em structure of monomeric sparta grna-ssdna target complex

PDB DOI: 10.2210/pdb8ifk/pdb

Classification: RNA BINDING PROTEIN/RNA/DNA
Organism(s): Thermoflavifilum Thermophilum , Synthetic Construct

Deposited: 2023-02-18
Deposition Author(s): Jia, N. , Zhang, J.T.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.54 Å

8ifk
Literature

Cryo-em structure of monomeric sparta grna-ssdna target complex

Jia, N. , Zhang, J.T.

Primary Citation of Related Structures: 8IFK


Proteins
Molecule Chains Sequence Length Organism Sequence
TIR domain-containing protein A 450 Thermoflavifilum Thermophilum , Synthetic Construct MRNKIFISHATPEDDDFTRWLSLKLIGLGYEVWCDILFLDKGVDFWSTIEKEIRENTCKFLIVSSTAGNKREGVLKELAVATKVKKHLQDDMFIIPLAIDENLSYDDINIEIVRLNAIDFKKSWAKGLQDLLDAFEKQNVPKKPPDHSKSNLLYQQIFLHDKQAIEKEETYDSNWFPIISFPNELRFHRYDWRLPKQFDVRTLAFPAIRYKEYLCTFAWEYDFIHQLPKTETYNGQESIRISTSDILSGRYDTDFIRNYECQRLIVQLINKAFELRMKDKNVREYQMSKTFAYWIEKGKLEKDKFEKIKLVGKQKNKYWHFGISAAGKLYPSPVLMVSSHIIFTMDGINLIKSKSIQHSSRRKQGKNWWNDKWREKLLAFIRFLSDDQNAIYLNVGSEEKILISNKPLKFFGKMSYVTPSEVTLEEESVLADINNFEEDTEDLDELEDIE
Piwi domain-containing protein B 507 Thermoflavifilum Thermophilum , Synthetic Construct MKELIYIEEPSILFAHGQKCTDPRDGLALFGPLNQIYGIKSGVVGTQKGLQIFKSYLDKIQKPIYNHNNITRPMFPGFEAVFGCKWESQNIVFKEITDEEIRRYLFNASTHKRTYDLVTLFNDKIITANKNDEERVDVWFVIVPEEIYKYCRPNSVLPNELVQTKSLISKSKAKSFRYTPTLFEEFNKKLKEVEKEAKTYNYDAQFHDQLKARLLEHTIPTQILRESTLAWRDFKNTFGAPIRDFSKIEGHLAWTISTAAYYKAGGKPWKLGDIRPGVCYLGLVYKKIEKSKNPQNACCAAQMFLDNGDGTVFKGEVGPWYNPEKGEYHLKPKEAKALLTQALESYKEQNKSYPKEVFIHARTRFNDEEWNAFNEVTPKNTNLVGVTITKSKPLKLYKTEGAFPIMRGNAYIVDEKKAFLWTLGFVPKLQSTLSMEVPNPIFIEINKGEAEIQQVLKDILALTKLNYNACIYADGEPVTLRFANKIGEILTASTEIKTPPLAFKYYI

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
guide RNA c 21 NA AAACGGCUCUAAUCUAUUAGU
target ssDNA d 25 NA CAACTAATAGATTAGAGCCGTTTAT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-02-18
Deposition Author(s): Jia, N. , Zhang, J.T.