PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8IE2

Crystal structure of lactiplantibacillus plantarum glyrs

PDB DOI: 10.2210/pdb8ie2/pdb

Classification: TRANSFERASE,LIGASE
Organism(s): Lactiplantibacillus Plantarum Wcfs1

Deposited: 2023-02-15
Deposition Author(s): Tomita, K. , Yamashita, S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.6 Å

8ie2
Literature

Crystal structure of lactiplantibacillus plantarum glyrs

Tomita, K. , Yamashita, S.

Primary Citation of Related Structures: 8IE2


Proteins
Molecule Chains Sequence Length Organism Sequence
Glycine--tRNA ligase alpha subunit B 301 Lactiplantibacillus Plantarum Wcfs1 GPMSKKLSVQEIILTLQKFWSDQGCMLMQSYDTEKGAGTMSPYTFLRAIGPEPWNAAYVEPSRRPADGRYGENPNRLYQHHQFQVVMKPSPENVQDLYLQSLEKLGINPLEHDIRFVEDNWENPSMGCAGVGWEVWLDGMEISQFTYFQQVGGLEVDPVTSEITYGLERLSSYIQDVNSVFDLEWGDGVKYGDIFLEPEFENSKYAFEDSNEELLLMLFDEYEKEAKRQIKNGLVHPAYDYCLKCSHTFNLMDARGMVSVTERAGYLDRIRNMAKSIAKEFVAQREKRGFPLLKHAQEETK
Glycine--tRNA ligase alpha subunit A 301 Lactiplantibacillus Plantarum Wcfs1 GPMSKKLSVQEIILTLQKFWSDQGCMLMQSYDTEKGAGTMSPYTFLRAIGPEPWNAAYVEPSRRPADGRYGENPNRLYQHHQFQVVMKPSPENVQDLYLQSLEKLGINPLEHDIRFVEDNWENPSMGCAGVGWEVWLDGMEISQFTYFQQVGGLEVDPVTSEITYGLERLSSYIQDVNSVFDLEWGDGVKYGDIFLEPEFENSKYAFEDSNEELLLMLFDEYEKEAKRQIKNGLVHPAYDYCLKCSHTFNLMDARGMVSVTERAGYLDRIRNMAKSIAKEFVAQREKRGFPLLKHAQEETK
Glycine--tRNA ligase alpha subunit D 301 Lactiplantibacillus Plantarum Wcfs1 GPMSKKLSVQEIILTLQKFWSDQGCMLMQSYDTEKGAGTMSPYTFLRAIGPEPWNAAYVEPSRRPADGRYGENPNRLYQHHQFQVVMKPSPENVQDLYLQSLEKLGINPLEHDIRFVEDNWENPSMGCAGVGWEVWLDGMEISQFTYFQQVGGLEVDPVTSEITYGLERLSSYIQDVNSVFDLEWGDGVKYGDIFLEPEFENSKYAFEDSNEELLLMLFDEYEKEAKRQIKNGLVHPAYDYCLKCSHTFNLMDARGMVSVTERAGYLDRIRNMAKSIAKEFVAQREKRGFPLLKHAQEETK
Glycine--tRNA ligase alpha subunit C 301 Lactiplantibacillus Plantarum Wcfs1 GPMSKKLSVQEIILTLQKFWSDQGCMLMQSYDTEKGAGTMSPYTFLRAIGPEPWNAAYVEPSRRPADGRYGENPNRLYQHHQFQVVMKPSPENVQDLYLQSLEKLGINPLEHDIRFVEDNWENPSMGCAGVGWEVWLDGMEISQFTYFQQVGGLEVDPVTSEITYGLERLSSYIQDVNSVFDLEWGDGVKYGDIFLEPEFENSKYAFEDSNEELLLMLFDEYEKEAKRQIKNGLVHPAYDYCLKCSHTFNLMDARGMVSVTERAGYLDRIRNMAKSIAKEFVAQREKRGFPLLKHAQEETK
Glycine--tRNA ligase beta subunit H 694 Lactiplantibacillus Plantarum Wcfs1 MAKTYLLEIGLEEMPAHVVTPSVLQLKERMIKFLKDARLDFEDVKTFSTPRRLTVQVLGLADKQADVKKEVRGPAKKIAQDADGNWTKAAIGFSKGQGASTDDIVFKDVKGTPYVFVQTFTAGKTAAEVLTGGIKDVITKMNFPTMMKWSTYSFKYIRPIRWIVSLLDDEVVPVQILDVAAGRVSRGHRFLGHDVEIATAADYEADLASVQVVADAAKRKATIREQIAALANERDWQIKVNEDLLEEVNNLVEYPTAFAGDFDTKYLTIPDEVLITSMRDHQRFFYVTDAEDNLLPHFVSVRNGNTDHLENVALGNQKVLTARLEDAAFFYHEDQQHSIQEYVERLKKVSFHDKIGTMYEKMQRVMIISDFLADRFGLTETEKNQLHRAAQIYKFDLVTGMVGEFPELQGVMGDKYAVLKGEDPAVGQAIREHYMPISADGDLPKSKVGAVLAIADKVDSITSFFAVGLTPSGSNDPFALRRQAFGIVRIVREQGWDFPIRQLEADIQKELVAHDATYNLDFEKQTAPVADFLTDRVKQWFNNRKIRYDIVDTVIKGSRQDIREMFKAADVLNAHQDDPQFKDTIEAFTRLLRITAKAKLAADDLTVDPSLFENEAEQHLYDAVLELQKQFTPAMSMEDRFKALAALRPLIVDYFEQTMVMSKDEKVRDNHLKQLLTIAQMINVMGDLNQLIVK
Glycine--tRNA ligase beta subunit F 694 Lactiplantibacillus Plantarum Wcfs1 MAKTYLLEIGLEEMPAHVVTPSVLQLKERMIKFLKDARLDFEDVKTFSTPRRLTVQVLGLADKQADVKKEVRGPAKKIAQDADGNWTKAAIGFSKGQGASTDDIVFKDVKGTPYVFVQTFTAGKTAAEVLTGGIKDVITKMNFPTMMKWSTYSFKYIRPIRWIVSLLDDEVVPVQILDVAAGRVSRGHRFLGHDVEIATAADYEADLASVQVVADAAKRKATIREQIAALANERDWQIKVNEDLLEEVNNLVEYPTAFAGDFDTKYLTIPDEVLITSMRDHQRFFYVTDAEDNLLPHFVSVRNGNTDHLENVALGNQKVLTARLEDAAFFYHEDQQHSIQEYVERLKKVSFHDKIGTMYEKMQRVMIISDFLADRFGLTETEKNQLHRAAQIYKFDLVTGMVGEFPELQGVMGDKYAVLKGEDPAVGQAIREHYMPISADGDLPKSKVGAVLAIADKVDSITSFFAVGLTPSGSNDPFALRRQAFGIVRIVREQGWDFPIRQLEADIQKELVAHDATYNLDFEKQTAPVADFLTDRVKQWFNNRKIRYDIVDTVIKGSRQDIREMFKAADVLNAHQDDPQFKDTIEAFTRLLRITAKAKLAADDLTVDPSLFENEAEQHLYDAVLELQKQFTPAMSMEDRFKALAALRPLIVDYFEQTMVMSKDEKVRDNHLKQLLTIAQMINVMGDLNQLIVK
Glycine--tRNA ligase beta subunit E 694 Lactiplantibacillus Plantarum Wcfs1 MAKTYLLEIGLEEMPAHVVTPSVLQLKERMIKFLKDARLDFEDVKTFSTPRRLTVQVLGLADKQADVKKEVRGPAKKIAQDADGNWTKAAIGFSKGQGASTDDIVFKDVKGTPYVFVQTFTAGKTAAEVLTGGIKDVITKMNFPTMMKWSTYSFKYIRPIRWIVSLLDDEVVPVQILDVAAGRVSRGHRFLGHDVEIATAADYEADLASVQVVADAAKRKATIREQIAALANERDWQIKVNEDLLEEVNNLVEYPTAFAGDFDTKYLTIPDEVLITSMRDHQRFFYVTDAEDNLLPHFVSVRNGNTDHLENVALGNQKVLTARLEDAAFFYHEDQQHSIQEYVERLKKVSFHDKIGTMYEKMQRVMIISDFLADRFGLTETEKNQLHRAAQIYKFDLVTGMVGEFPELQGVMGDKYAVLKGEDPAVGQAIREHYMPISADGDLPKSKVGAVLAIADKVDSITSFFAVGLTPSGSNDPFALRRQAFGIVRIVREQGWDFPIRQLEADIQKELVAHDATYNLDFEKQTAPVADFLTDRVKQWFNNRKIRYDIVDTVIKGSRQDIREMFKAADVLNAHQDDPQFKDTIEAFTRLLRITAKAKLAADDLTVDPSLFENEAEQHLYDAVLELQKQFTPAMSMEDRFKALAALRPLIVDYFEQTMVMSKDEKVRDNHLKQLLTIAQMINVMGDLNQLIVK
Glycine--tRNA ligase beta subunit G 694 Lactiplantibacillus Plantarum Wcfs1 MAKTYLLEIGLEEMPAHVVTPSVLQLKERMIKFLKDARLDFEDVKTFSTPRRLTVQVLGLADKQADVKKEVRGPAKKIAQDADGNWTKAAIGFSKGQGASTDDIVFKDVKGTPYVFVQTFTAGKTAAEVLTGGIKDVITKMNFPTMMKWSTYSFKYIRPIRWIVSLLDDEVVPVQILDVAAGRVSRGHRFLGHDVEIATAADYEADLASVQVVADAAKRKATIREQIAALANERDWQIKVNEDLLEEVNNLVEYPTAFAGDFDTKYLTIPDEVLITSMRDHQRFFYVTDAEDNLLPHFVSVRNGNTDHLENVALGNQKVLTARLEDAAFFYHEDQQHSIQEYVERLKKVSFHDKIGTMYEKMQRVMIISDFLADRFGLTETEKNQLHRAAQIYKFDLVTGMVGEFPELQGVMGDKYAVLKGEDPAVGQAIREHYMPISADGDLPKSKVGAVLAIADKVDSITSFFAVGLTPSGSNDPFALRRQAFGIVRIVREQGWDFPIRQLEADIQKELVAHDATYNLDFEKQTAPVADFLTDRVKQWFNNRKIRYDIVDTVIKGSRQDIREMFKAADVLNAHQDDPQFKDTIEAFTRLLRITAKAKLAADDLTVDPSLFENEAEQHLYDAVLELQKQFTPAMSMEDRFKALAALRPLIVDYFEQTMVMSKDEKVRDNHLKQLLTIAQMINVMGDLNQLIVK
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2023-02-15
Deposition Author(s): Tomita, K. , Yamashita, S.