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FASTA Sequence PDB Format mmCIF Format
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8IBX

Structure of r2 with 3'utr and dna in unwinding state

PDB DOI: 10.2210/pdb8ibx/pdb

Classification: RNA BINDING PROTEIN/RNA/DNA
Organism(s): Bombyx Mori

Deposited: 2023-02-10
Deposition Author(s): Deng, P. , Liu, J.J. , Tan, S. , Wang, J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.74 Å

Literature

Structure of r2 with 3'utr and dna in unwinding state

Deng, P. , Liu, J.J. , Tan, S. , Wang, J.

Primary Citation of Related Structures: 8IBX


Proteins
Molecule Chains Sequence Length Organism Sequence
Reverse transcriptase-like protein C 1114 Bombyx Mori MMASTALSLMGRCNPDGCTRGKHVTAAPMDGPRGPSSLAGTFGWGLAIPAGEPCGRVCSPATVGFFPVAKKSNKENRPEASGLPLESERTGDNPTVRGSAGADPVGQDAPGWTCQFCERTFSTNRGLGVHKRRAHPVETNTDAAPMMVKRRWHGEEIDLLARTEARLLAERGQCSGGDLFGALPGFGRTLEAIKGQRRREPYRALVQAHLARFGSQPGPSSGGCSAEPDFRRASGAEEAGEERCAEDAAAYDPSAVGQMSPDAARVLSELLEGAGRRRACRAMRPKTAGRRNDLHDDRTASAHKTSRQKRRAEYARVQELYKKCRSRAAAEVIDGACGGVGHSLEEMETYWRPILERVSDAPGPTPEALHALGRAEWHGGNRDYTQLWKPISVEEIKASRFDWRTSPGPDGIRSGQWRAVPVHLKAEMFNAWMARGEIPEILRQCRTVFVPKVERPGGPGEYRPISIASIPLRHFHSILARRLLACCPPDARQRGFICADGTLENSAVLDAVLGDSRKKLRECHVAVLDFAKAFDTVSHEALVELLRLRGMPEQFCGYIAHLYDTASTTLAVNNEMSSPVKVGRGVRQGDPLSPILFNVVMDLILASLPERVGYRLEMELVSALAYAYDLVLLAGSKVGMQESISAVDCVGRQMGLRLNCRKSAVLSMIPDGHRKKHHYLTERTFNIGGKPLRQVSCVERWRYLGVDFEASGCVTLEHSISSALNNISRAPLKPQQRLEILRAHLIPRFQHGFVLGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPSVRATIPDLIVRRFGGLDSSPWSVARAAAKSDKIRKKLRWAWKQLRRFSRVDSTTQRPSVRLFWREHLHASVDGRELRESTRTPTSTKWIRERCAQITGRDFVQFVHTHINALPSRIRGSRGRRGGGESSLTCRAGCKVRETTAHILQQCHRTHGGRILRHNKIVSFVAKAMEENKWTVELEPRLRTSVGLRKPAIIASRDGVGVIVDVQVVSGQRSLDELHREKRNKYGNHGELVELVAGRLGLPKAECVRATSCTISWRGVWSLTSYKELRSIIGLREPTLQIVPILALRGSHMNWTRFNQMTSVMGGGVG

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (60-MER) b 60 NA GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG
DNA (60-MER) a 60 NA CAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTC
3'UTR d 50 NA GUAGAUCAGGCCCGUCUGAUCCAAUUUCGCCGGCGUACCCGGCGAUGAAA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-02-10
Deposition Author(s): Deng, P. , Liu, J.J. , Tan, S. , Wang, J.