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FASTA Sequence PDB Format mmCIF Format
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8I5L

Crystal structure of p domain from norovirus gi.4 capsid protein in complex with broad specificity antibody single-chain fv fragment cv-2f5.

PDB DOI: 10.2210/pdb8i5l/pdb

Classification: VIRAL PROTEIN
Organism(s): Chiba Virus , Homo Sapiens

Deposited: 2023-01-26
Deposition Author(s): Kato-Murayama, M. , Murayama, K. , Shirouzu, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.7 Å

Literature

Crystal structure of p domain from norovirus gi.4 capsid protein in complex with broad specificity antibody single-chain fv fragment cv-2f5.

Kato-Murayama, M. , Murayama, K. , Shirouzu, M.

Primary Citation of Related Structures: 8I5L


Proteins
Molecule Chains Sequence Length Organism Sequence
Capsid protein A 314 Chiba Virus , Homo Sapiens QKTRPFTVPNIPLKYLSNSRIPNPIEGMSLSPDQTQNVQFQNGRCTIDGQPLGTTPVSVSQLCKFRGRITSGQRVLNLTELDGSPFMAFAAPAPAGFPDLGSCDWHIEMSKIPNSSTQNNPIVTNSVKPNSQQFVPHLSSITLDENVSSGGDYIGTIQWTSPPSDSGGANTNFWKIPDYGSSLAEASQLAPAVYPPGFNEVIVYFMASIPGPNQSGSPNLVPCLLPQEYITHFISEQAPIQGEAALLHYVDPDTNRNLGEFKLYPGGYLTCVPNSSSTGPQQLPLDGVFVFASWVSRFYQLKPVGTAGPARGRL
Capsid protein B 314 Chiba Virus , Homo Sapiens QKTRPFTVPNIPLKYLSNSRIPNPIEGMSLSPDQTQNVQFQNGRCTIDGQPLGTTPVSVSQLCKFRGRITSGQRVLNLTELDGSPFMAFAAPAPAGFPDLGSCDWHIEMSKIPNSSTQNNPIVTNSVKPNSQQFVPHLSSITLDENVSSGGDYIGTIQWTSPPSDSGGANTNFWKIPDYGSSLAEASQLAPAVYPPGFNEVIVYFMASIPGPNQSGSPNLVPCLLPQEYITHFISEQAPIQGEAALLHYVDPDTNRNLGEFKLYPGGYLTCVPNSSSTGPQQLPLDGVFVFASWVSRFYQLKPVGTAGPARGRL
Capsid protein C 314 Chiba Virus , Homo Sapiens QKTRPFTVPNIPLKYLSNSRIPNPIEGMSLSPDQTQNVQFQNGRCTIDGQPLGTTPVSVSQLCKFRGRITSGQRVLNLTELDGSPFMAFAAPAPAGFPDLGSCDWHIEMSKIPNSSTQNNPIVTNSVKPNSQQFVPHLSSITLDENVSSGGDYIGTIQWTSPPSDSGGANTNFWKIPDYGSSLAEASQLAPAVYPPGFNEVIVYFMASIPGPNQSGSPNLVPCLLPQEYITHFISEQAPIQGEAALLHYVDPDTNRNLGEFKLYPGGYLTCVPNSSSTGPQQLPLDGVFVFASWVSRFYQLKPVGTAGPARGRL
scFv fragment D 263 Chiba Virus , Homo Sapiens GSSGSSGMAEVQLVESGGGLVKPGGSLRLSCAASGFTFSSYNMNWVRQAPGKGLEWVSSISTSSRYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAREEGSVDYGMDVWGQGTTVTVSSGRGGSGGGGSGGGGSMAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGWVFGGGTKLTVLGSARQSA
scFv fragment E 263 Chiba Virus , Homo Sapiens GSSGSSGMAEVQLVESGGGLVKPGGSLRLSCAASGFTFSSYNMNWVRQAPGKGLEWVSSISTSSRYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAREEGSVDYGMDVWGQGTTVTVSSGRGGSGGGGSGGGGSMAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGWVFGGGTKLTVLGSARQSA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2023-01-26
Deposition Author(s): Kato-Murayama, M. , Murayama, K. , Shirouzu, M.