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8I5I

Crystal structure of sars-cov-2 delta variant spike receptor-binding domain (rbd) in complex with ncv2sg53 fab

PDB DOI: 10.2210/pdb8i5i/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2

Deposited: 2023-01-25
Deposition Author(s): Higashiura, A. , Yamamoto, A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.06 Å

8i5i
Literature

Crystal structure of sars-cov-2 delta variant spike receptor-binding domain (rbd) in complex with ncv2sg53 fab

Higashiura, A. , Yamamoto, A.

Primary Citation of Related Structures: 8I5I


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike protein S1 R 224 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 QPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYRYRLFRKSNLKPFERDISTEIYQAGSKPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNTGHHHHHH
Fab Heavy chain H 227 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 QVQMVESGGGLVRPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWISYISSSGSSMNYADSVKGRFTISRDNAKNSLFLQMNSLRAEDTAVYYCAREFDLTKIIMVPPYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
Fab Light chain L 214 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 AIQLTQSPSSLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKVLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQLKSYPLTFGGGTKVEITRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2023-01-25
Deposition Author(s): Higashiura, A. , Yamamoto, A.