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8HR5

Cryo-em structure of the cncas12f1-sgrna-dna complex

PDB DOI: 10.2210/pdb8hr5/pdb

Classification: RNA BINDING PROTEIN/RNA/DNA
Organism(s): Clostridium Novyi , Synthetic Construct

Deposited: 2022-12-14
Deposition Author(s): Ji, Q. , Li, F.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.73 Å

Literature

Cryo-em structure of the cncas12f1-sgrna-dna complex

Ji, Q. , Li, F.

Primary Citation of Related Structures: 8HR5


Proteins
Molecule Chains Sequence Length Organism Sequence
Transposase A 497 Clostridium Novyi , Synthetic Construct MITVRKIKLTIMGDKDTRNSQYKWIRDEQYNQYRALNMGMTYLAVNDILYMNESGLEIRTIKDLKDCEKDIDKNKKEIEKLTARLEKEQNKKNSSSEKLDEIKYKISLVENKIEDYKLKIVELNKILEETQKERMDIQKEFKEKYVDDLYQVLDKIPFKHLDNKSLVTQRIKADIKSDKSNGLLKGERSIRNYKRNFPLMTRGRDLKFKYDDNDDIEIKWMEGIKFKVILGNRIKNSLELRHTLHKVIEGKYKICDSSLQFDKNNNLILNLTLDIPIDIVNKKVSGRVVGVDLGLKIPAYCALNDVEYIKKSIGRIDDFLKVRTQMQSRRRRLQIAIQSAKGGKGRVNKLQALERFAEKEKNFAKTYNHFLSSNIVKFAVSNQAEQINMELLSLKETQNKSILRNWSYYQLQTMIEYKAQREGIKVKYIDPYHTSQTCSKCGNYEEGQRESQADFICKKCGYKVNADYNAARNIAMSNKYITKKEESKYYKIKESMV
Transposase B 497 Clostridium Novyi , Synthetic Construct MITVRKIKLTIMGDKDTRNSQYKWIRDEQYNQYRALNMGMTYLAVNDILYMNESGLEIRTIKDLKDCEKDIDKNKKEIEKLTARLEKEQNKKNSSSEKLDEIKYKISLVENKIEDYKLKIVELNKILEETQKERMDIQKEFKEKYVDDLYQVLDKIPFKHLDNKSLVTQRIKADIKSDKSNGLLKGERSIRNYKRNFPLMTRGRDLKFKYDDNDDIEIKWMEGIKFKVILGNRIKNSLELRHTLHKVIEGKYKICDSSLQFDKNNNLILNLTLDIPIDIVNKKVSGRVVGVDLGLKIPAYCALNDVEYIKKSIGRIDDFLKVRTQMQSRRRRLQIAIQSAKGGKGRVNKLQALERFAEKEKNFAKTYNHFLSSNIVKFAVSNQAEQINMELLSLKETQNKSILRNWSYYQLQTMIEYKAQREGIKVKYIDPYHTSQTCSKCGNYEEGQRESQADFICKKCGYKVNADYNAARNIAMSNKYITKKEESKYYKIKESMV

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
sgRNA c 235 NA AACAUAGUUAAACUAAUAAAAACAGGGCGAUUUAACGUCCUAAGGCUGAGAGAAGUUUUUUCUACUCGGCAAGGGUUAAUCUCGAUUGUUGUGUUACCGAUCGAGCGUUUCACAAAAUGCGAGAGAAAUCUCGCAUUUUUAAUUUUGCAGUAAGGCUAGUUUUUAUAUAAAUAUGCUAUAACUAGGGUUUUAGUUUAACUAUGUGAAAUGUAAAUAAUAGAUGUGAAGUCGCUUU
DNA (28-MER) d 28 NA GAAAAGCGACTTCACATCTATTAGGTTA
DNA (5'-D(*TP*AP*AP*CP*CP*TP*AP*AP*TP*AP*GP*AP*TP*GP*TP*GP*AP*A)-3') e 18 NA TAACCTAATAGATGTGAA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-12-14
Deposition Author(s): Ji, Q. , Li, F.