8HQZ
Baseplate of dt57c bacteriophage in the full state
PDB DOI: 10.2210/pdb8hqz/pdb
Classification: VIRAL PROTEIN Organism(s): Escherichia Phage Dt57C
Deposited: 2022-12-14 Deposition Author(s): Ayala, R. , Chen, T.H. , Golomidova, A.K. , Kulikov, E.E. , Letarov, A.V. , Moiseenko, A.V. , Orekhov, P.S. , Sokolova, O.S. , Street, M.A. , Wolf, M.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.8 Å
Baseplate of dt57c bacteriophage in the full state
Ayala, R. , Chen, T.H. , Golomidova, A.K. , Kulikov, E.E. , Letarov, A.V. , Moiseenko, A.V. , Orekhov, P.S. , Sokolova, O.S. , Street, M.A. , Wolf, M.
Primary Citation of Related Structures: 8HQZ
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Baseplate hub protein | A | 949 | Escherichia Phage Dt57C | MKQILDSARNYLKNNSRIKTASLISLELPGSTGTSTAFIYLTDYFRDVIYNGILYQAGKVKSISPHKQNRDLSIGSLSFTITGTAQDEVLKLVQNGVSFLDRTVSIHQAIITEDGSILPVDPDTNGPLLYFRGRITGGGIKDNISTSGVGTSTITWNCSNQFYDFDRVNGRYTDDASHRGLEVVAGQLLPSNGAKRLEYQEDYGFFHANKSISILAKYQVQEERYKLKSKKKLFGLSRSYSLKKYYETVTKEVDIDFNLAAKYIPVVYGVQKIPGIPIFADTELHNPNIVYVVYAFAEGEIDGFLDFSFGDNPMICVDANDSSARTCFGTKKIVGDTMQRIASGISSSSPSVHGQEYRYNDGNGDIRIWTYHGKSNQTASDVLVNIARNRGFYLQNMNGNGPEYWDARYKLLDTAYAVVRFTINENRTEIPEVSAEIQGKKVKVYHSDGRVTANSTSLNGIWQTLDYLTSDRYGANITIDQFPLQQLIQEAAILDIIDESYQVSWQPYWRYVGWTNPLAENRQIVQMNTILDTSESVFKNVQGLLESYGGAINNLSGQYRVTVEKYSNTPLEINFLDTYGDLELSDTTGRNKFNSVQASIVDPALSWKTNSITFYNSNYKEQDKNLDKKLQLSFANITNYYTARSFADRELKKSRYSRTLSFSLPYQFIGIEPNDAIAFTYDRYGWDRKYFLVDEVENSREGKINVTLQEYGEDVFINSGQVDNSGNDIPDISNNVLPPRDFKYTPTPGGLVGSIGKNGELSWLPSLTNNVVYYSIVHSGHAEPYIVQQLETNPNERMIQEIIGEPAGLAIFEIRAVDINGRRSSPVTLSIELNSAKNLSVVSNFRVTNTASGDVTEFVGPDVKLAWDRIPEEDIIESIFYTLEIHDPQNRMLRSVRIENQYTYDYLLTYNKADFALQNSDALGINRKLYFRIRAEGDDGEQSVEWASI |
| Distal tail protein | H | 204 | Escherichia Phage Dt57C | MRLPDPYTNPELSGLGFESVNLIDNDPVIRDELPNGKVNEVKVSAQYWGINISYPELFPDEYSVLDAFILEYKRTGGYIDVILPQYEAFRVRGNTNLVNIPAGQKGSNITMDTQGVLTGIPKPGDLFKLSNHPKVYKITSFNRSGNSWSINVYPDLFITTTGAEKPVFNGILFRTKLMNGDAFGSTLNNNGTYSGISLNLRESL |
| Distal tail protein | I | 204 | Escherichia Phage Dt57C | MRLPDPYTNPELSGLGFESVNLIDNDPVIRDELPNGKVNEVKVSAQYWGINISYPELFPDEYSVLDAFILEYKRTGGYIDVILPQYEAFRVRGNTNLVNIPAGQKGSNITMDTQGVLTGIPKPGDLFKLSNHPKVYKITSFNRSGNSWSINVYPDLFITTTGAEKPVFNGILFRTKLMNGDAFGSTLNNNGTYSGISLNLRESL |
| Minor tail protein | L | 300 | Escherichia Phage Dt57C | MYYSLMRESKVIVEYDGRAFHFDALSNYDVQTSYEEFKTLRRTIHRRTNYADSVINAQTPSSISLAINFSNTLTEANFFEWLGFDRKGNTFLLPLYSNNIEPIMFNIYIVNKDNNCVYFENCYVSTVDFSLDKNIPILNVGIESGKFSEVSTYREAASIIQGEAMSYSPVIVSTNGNILPGLISASLSFQQQCSWREDKSVFDINKIYNNKRAYVNEMNASATISLYYLKRFAGDMVYNIEPETDVPLNIRNNNISIDFPLARISKRLNFSDVYKVEWDIIPTASSDPVRIDFFGEIKND |
| L-shaped tail fiber assembly | Q | 140 | Escherichia Phage Dt57C | MSTENRVIDIVVDEKVPYGLIMQFMDVDDSVYPPSEIPVNLTGYSLRGTIKSSLDENAETLASFTTSIIDAAQGAAAISLSVADVTNIGEKASKERDKYNPRQRFAGYYDILMTRDVIGSEVSSFRIMEGKVYISDGVTQ |
| L-shaped tail fiber assembly | R | 140 | Escherichia Phage Dt57C | MSTENRVIDIVVDEKVPYGLIMQFMDVDDSVYPPSEIPVNLTGYSLRGTIKSSLDENAETLASFTTSIIDAAQGAAAISLSVADVTNIGEKASKERDKYNPRQRFAGYYDILMTRDVIGSEVSSFRIMEGKVYISDGVTQ |
| L-shaped tail fiber assembly | S | 140 | Escherichia Phage Dt57C | MSTENRVIDIVVDEKVPYGLIMQFMDVDDSVYPPSEIPVNLTGYSLRGTIKSSLDENAETLASFTTSIIDAAQGAAAISLSVADVTNIGEKASKERDKYNPRQRFAGYYDILMTRDVIGSEVSSFRIMEGKVYISDGVTQ |
| L-shaped tail fiber assembly | T | 140 | Escherichia Phage Dt57C | MSTENRVIDIVVDEKVPYGLIMQFMDVDDSVYPPSEIPVNLTGYSLRGTIKSSLDENAETLASFTTSIIDAAQGAAAISLSVADVTNIGEKASKERDKYNPRQRFAGYYDILMTRDVIGSEVSSFRIMEGKVYISDGVTQ |
| L-shaped tail fiber assembly | D | 1076 | Escherichia Phage Dt57C | MALKTKIIVQQILNIDDTTTTASKYPKYTVVLGNSISSITAGELTAAVEASAGSAAAAKGSEIAAKESELNAKDSENEAAISAGASEESASQSAASAAESERQAGLSKGSADNSAASAQESEGFRDSAELAAQNAEQSRLLAEQAKTAAQQAQTAAEAAKTGAETAKDGADAAATTAGEHAAAARQSELNAKISETNAAGSATEAGDKAIDATTEADRAKAEADRATQIVDSKLDKVDISGFIKVYKTKAEADADVVNRVLDEKVLVWNQTNSKYGWYKVAGTAETPVLELVETEQKLTSVNNVRADDAGNVQITLPGGNPSLWLGEVTWFPYDKDSGVGYPGVLPADGREVLRVDYPDTWEAIEAGLIPSVSEAEWQAGASLYFSTGDGSTTFRLPDMMQGQAFRAPTKGEEDAGVIKDQIPYVVTVNGISPDAITGNVEIDTSLQGTVSINQGGTGATTKEDARIALELYSTTEVDSALADKADIATTYTKTEVDSALADKADIATTYTKVEVDSALADAKTQSDTDYLLKANNLSDLADRAAAWLNVRPIGSTPLAGDPVGDYDAVTKRWVENKINTGTVGPTMNGVMNYGVGDFHLRDSRAYIQPYEVVSDGQLLNRADWPELWAYAQMLSPISDADWLADPTKRGQYSLGDGSTTFRVPDRNGVQTGSISALFGRGDGGASSTGGTILDSAAPNITGSFGRLVYASTGTIYEANTGTGAFSAVLSQAKYKRLSEISAADGTAATYPSGFEFFASNSSPVYGRGSTEVRPKAFTGVWVIRASGGFVAANTSWSVINGDATRPADGTTADGGEIISRYNVNGVREAQMSWRIRAQIGAEHYARLNVYNATANRTAVYDFNDLGTFSAENLHSKGAIYSDGNLTIQNQGWPGINFKSNRYNTPATQIGGSTIIEVSGTDGNVSGVNLIRRRGDGNQAGQIIVSFPTTGGAIALQGTSGIEYKKDVTDADAQEAMDRINGQRLVNFVYKDDEQERVRFGVIAEEAELIAPQYIKHNQVSYEDILDEEGNKIGEKTRDRPSVDVNPIVMDLMGCVQALNAKIAALEARIAELESKE |
| L-shaped tail fiber assembly | E | 1076 | Escherichia Phage Dt57C | MALKTKIIVQQILNIDDTTTTASKYPKYTVVLGNSISSITAGELTAAVEASAGSAAAAKGSEIAAKESELNAKDSENEAAISAGASEESASQSAASAAESERQAGLSKGSADNSAASAQESEGFRDSAELAAQNAEQSRLLAEQAKTAAQQAQTAAEAAKTGAETAKDGADAAATTAGEHAAAARQSELNAKISETNAAGSATEAGDKAIDATTEADRAKAEADRATQIVDSKLDKVDISGFIKVYKTKAEADADVVNRVLDEKVLVWNQTNSKYGWYKVAGTAETPVLELVETEQKLTSVNNVRADDAGNVQITLPGGNPSLWLGEVTWFPYDKDSGVGYPGVLPADGREVLRVDYPDTWEAIEAGLIPSVSEAEWQAGASLYFSTGDGSTTFRLPDMMQGQAFRAPTKGEEDAGVIKDQIPYVVTVNGISPDAITGNVEIDTSLQGTVSINQGGTGATTKEDARIALELYSTTEVDSALADKADIATTYTKTEVDSALADKADIATTYTKVEVDSALADAKTQSDTDYLLKANNLSDLADRAAAWLNVRPIGSTPLAGDPVGDYDAVTKRWVENKINTGTVGPTMNGVMNYGVGDFHLRDSRAYIQPYEVVSDGQLLNRADWPELWAYAQMLSPISDADWLADPTKRGQYSLGDGSTTFRVPDRNGVQTGSISALFGRGDGGASSTGGTILDSAAPNITGSFGRLVYASTGTIYEANTGTGAFSAVLSQAKYKRLSEISAADGTAATYPSGFEFFASNSSPVYGRGSTEVRPKAFTGVWVIRASGGFVAANTSWSVINGDATRPADGTTADGGEIISRYNVNGVREAQMSWRIRAQIGAEHYARLNVYNATANRTAVYDFNDLGTFSAENLHSKGAIYSDGNLTIQNQGWPGINFKSNRYNTPATQIGGSTIIEVSGTDGNVSGVNLIRRRGDGNQAGQIIVSFPTTGGAIALQGTSGIEYKKDVTDADAQEAMDRINGQRLVNFVYKDDEQERVRFGVIAEEAELIAPQYIKHNQVSYEDILDEEGNKIGEKTRDRPSVDVNPIVMDLMGCVQALNAKIAALEARIAELESKE |
| L-shaped tail fiber assembly | F | 1076 | Escherichia Phage Dt57C | MALKTKIIVQQILNIDDTTTTASKYPKYTVVLGNSISSITAGELTAAVEASAGSAAAAKGSEIAAKESELNAKDSENEAAISAGASEESASQSAASAAESERQAGLSKGSADNSAASAQESEGFRDSAELAAQNAEQSRLLAEQAKTAAQQAQTAAEAAKTGAETAKDGADAAATTAGEHAAAARQSELNAKISETNAAGSATEAGDKAIDATTEADRAKAEADRATQIVDSKLDKVDISGFIKVYKTKAEADADVVNRVLDEKVLVWNQTNSKYGWYKVAGTAETPVLELVETEQKLTSVNNVRADDAGNVQITLPGGNPSLWLGEVTWFPYDKDSGVGYPGVLPADGREVLRVDYPDTWEAIEAGLIPSVSEAEWQAGASLYFSTGDGSTTFRLPDMMQGQAFRAPTKGEEDAGVIKDQIPYVVTVNGISPDAITGNVEIDTSLQGTVSINQGGTGATTKEDARIALELYSTTEVDSALADKADIATTYTKTEVDSALADKADIATTYTKVEVDSALADAKTQSDTDYLLKANNLSDLADRAAAWLNVRPIGSTPLAGDPVGDYDAVTKRWVENKINTGTVGPTMNGVMNYGVGDFHLRDSRAYIQPYEVVSDGQLLNRADWPELWAYAQMLSPISDADWLADPTKRGQYSLGDGSTTFRVPDRNGVQTGSISALFGRGDGGASSTGGTILDSAAPNITGSFGRLVYASTGTIYEANTGTGAFSAVLSQAKYKRLSEISAADGTAATYPSGFEFFASNSSPVYGRGSTEVRPKAFTGVWVIRASGGFVAANTSWSVINGDATRPADGTTADGGEIISRYNVNGVREAQMSWRIRAQIGAEHYARLNVYNATANRTAVYDFNDLGTFSAENLHSKGAIYSDGNLTIQNQGWPGINFKSNRYNTPATQIGGSTIIEVSGTDGNVSGVNLIRRRGDGNQAGQIIVSFPTTGGAIALQGTSGIEYKKDVTDADAQEAMDRINGQRLVNFVYKDDEQERVRFGVIAEEAELIAPQYIKHNQVSYEDILDEEGNKIGEKTRDRPSVDVNPIVMDLMGCVQALNAKIAALEARIAELESKE |
| Tape measure protein | K | 1227 | Escherichia Phage Dt57C | MTDKLIRELLIDVKQKGATRTAKSIENVSDALENAAAASELTNEQLGKMPKTLYSIERAADRAAKSLTKMQASRGMAGITKSIDSIGAKLDDLSIAMIEVADKLEAGFDGVSRSVKVMGNDVAAATEKVQDRLYDTNRVLGGTARGFNDTAGAAGRASRAIGNTSGSARGATRDFAAMAKVGGGLPLLYAAIASNIFVLQSAFEQLKLGDQLNRLEEFGVIVGTQTGTPVQSLARSLQEAAGYAISFEEAMRQASSASAYGFDAEQLNKFGLVARRAAAVLGVDMTDALNRVIKGVSKQEIELLDELGVTIRLNDAYADYVKQLNAANTGITYNINSLTTFQKQQAYANAVIAESTKRFGYLDEVLRATPWEQFAANADAALRTIQQAAAKYLGPVIDAINTVFYTSQASISAEAARAQEQTNKQIDPTNVGAVALSLSASEEGYNKALDMYKESLDKRNKLKSEFDKRMEQADFYTKLAIRQVGEGIPAGLATAGASEANKKFVEETAAMGLQVARLDKEVTDSTENLNAWKSAYQAAGAAAAKANPEFQKQINLQRDTTDPGAVYDFNSTVLKGLTEQQKAYNQTKKTASDLANDIQNVAQNTDTAAKTSATLADAIKNIESLSLGTGKSADEYVKNLNLGYNTLSEMKTASQALSEYVKLTGNETKNQLAVQQKIADVYNQTKDKEKAQEAGRRLELQQLEEQEAALRRVLQTNQGNKAVEREIEKIQLEKIKLTNQGMEAQKKVKDYTDKILGVDREIALLNNRTMTDTQYRLAQLNLELTIEKEKYEWYTKQADKQKEAEQSRRAQAQIEREIWKFHQDQQAEMTSKRQEAFENTLTSMFPLAGEMQKMEMQLDFYTQMKELTKDNANEQMRWNAEIAKTRAQMSALTAQRNAQMQSSVGSSLGAVYTPTTGLSGEDKKFADMGNQLASYDQAISKLSELNSEATAVAQSMGNLANAMIQFSQGSLDTTSTIAVGMQTVASMIQYSTSQQVSAIDQAIAAEQKRDGKSEASKAKLKKLEAEKLKIQQDAAKKQIIIQTAVAVMQAATAVPYPFSIPLMIAAGLAGALALAQASSASGMSSIGDSGADTASYLTLGERQKNIDVSMSANAGELSYVRGDKGIGNANSFVPRAEGGNMYPGVSYQMGEHGTEVVTPMVPMKATPNDELKNSSNSTAGRPIILNISAMDAASFREFASSNSGALRDAVELALNENGASLKTLGNS |
| Tail tube protein | P | 468 | Escherichia Phage Dt57C | MSLQLLRNTRIFVSTVKTGHDTTNTQEILVQDDISWGQDSNSTDITVNEAGPRPTRGSKRFNDSLNAAEWSFSTYILPYEDTTTGKQIVPDYMLWHALSSGKAIDLDGDTGAHNNATNFMVNFKDNAYHELAMLHIYILTDNAWSYIDSCQINQAEVNVDIEDIGRVTWSGNGNQLIPLDEQPFDPDALGIDDETYMTIQSSYIKNKLTILKIKDMDSDKEYDIPITGGTFTINNNITYLTPNIMSRVNIPIGSFTGAFELTGSLTAYLNDKSLGSMELYKDLVRTLKVVNRFEIALILGGEYDDERPAAVLVAKQAHVNIPTIETDDVLGTSVEFKAIPTDLDTGDEGYLGFSNKYTKTTVANLIATGDGAETPPILVESITVKSAADATSVTNSDTLQMSVEVTPPEATNTAVTWSISSGDAATIDAESGLLTADVSKTGEVIVKAVAKDGSGVEGTKTITVSAGE |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2022-12-14 Deposition Author(s): Ayala, R. , Chen, T.H. , Golomidova, A.K. , Kulikov, E.E. , Letarov, A.V. , Moiseenko, A.V. , Orekhov, P.S. , Sokolova, O.S. , Street, M.A. , Wolf, M.