PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8HNW

Crystal structure of hpacas9-sgrna surveillance complex bound to double-stranded dna

PDB DOI: 10.2210/pdb8hnw/pdb

Classification: IMMUNE SYSTEM
Organism(s): Haemophilus Parainfluenzae , Synthetic Construct

Deposited: 2022-12-08
Deposition Author(s): Cheng, Z. , Sun, W. , Wang, Y.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.41 Å

Literature

Crystal structure of hpacas9-sgrna surveillance complex bound to double-stranded dna

Cheng, Z. , Sun, W. , Wang, Y.

Primary Citation of Related Structures: 8HNW


Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR-associated endonuclease Cas9 A 1055 Haemophilus Parainfluenzae , Synthetic Construct SMENKNLNYILGLDLGIASVGWAVVEIDEKENPLRLIDVGVRTFERAEVPKTGESLALSRRLARSARRLTQRRVARLKKAKRLLKSENILLSTDERLPHQVWQLRVEGLDHKLERQEWAAVLLHLIKHRGYLSQRKNESKSENKELGALLSGVDNNHKLLQQATYRSPAELAVKKFEVEEGHIRNQQGAYTHTFSRLDLLAEMELLFSRQQHFGNPFASEKLLENLTALLMWQKPALSGEAILKMLGKCTFEDEYKAAKNTYSAERFVWITKLNNLRIQENGLERALNDNERLALMEQPYDKNRLFYSQVRSILKLSDEAIFKGLRYSGEDKKAIETKAVLMEMKAYHQIRKVLEGNNLKAEWAELKANPTLLDEIGTAFSLYKTDEDISAYLAGKLSQPVLNALLENLSFDKFIQLSLKALYKLLPLMQQGLRYDEACREIYGDHYGKKTEENHHFLPQIPADEIRNPVVLRTLTQARKVINGVVRLYGSPARIHIETGREVGKSYKDRRELEKRQEENRKQRENAIKEFKEYFPHFAGEPKAKDILKMRLYKQQNAKCLYSGKPIELHRLLEKGYVEVDAALPFSRTWDDSFNNKVLVLANENQNKGNLTPFEWLDGKHNSERWRAFKALVETSAFPYAKKQRILSQKLDEKGFIERNLNDTRYVARFLCNFIADNMHLTGEGKRKVFASNGQITALLRSRWGLAKSREDNDRHHALDAVVVACSTVAMQQKITRFVRFEAGDVFTGERIDRETGEIIPLHFPTPWQFFKQEVEIRIFSDNPKLELENRLPDRPQANHEFVQPLFVSRMPTRKMTGQGHMETVKSAKRLNEGISVIKMPLTKLKLKDLELMVNREREKDLYDTLKARLEAFNDDPAKAFAEPFIKKGGAIVKSVRVEQIQKSGVLVREGNGVADNASMVRVDVFTKGGKYFLVPIYTWQVAKGILPNKAATQYKDEEDWEVMDNSATFKFSLHPNDLVKLVTKKKTILGYFNGLNRATGNIDIKEHDLDKSKGKQGIFEGVGIKLALSFEKYQVDELGKNIRLCKPSKRQPVR

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
sgRNA b 128 NA GGUCACUCUAACAUUUAAUCACACGUUGUAGCUCCCUUUUUCGAAAGAAAAACGUUGUUACAAUAAGAGAAAAGAUUUCUCGCAAAGCUCUGUCCCUUGAAAUGUAAGUUUCAAGGGACAUCUUUUUC
Target strand c 35 NA TAAAATCATATGTGTGATTAAATGTTAGAGTGACC
Non-target strand d 11 NA ATATGATTTTA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2022-12-08
Deposition Author(s): Cheng, Z. , Sun, W. , Wang, Y.