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8HNV

Cryoem structure of hpacas9-sgrna-dsdna in the presence of acriic4

PDB DOI: 10.2210/pdb8hnv/pdb

Classification: ANTIMICROBIAL PROTEIN
Organism(s): Eurotium Amstelodami , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2022-12-08
Deposition Author(s): Cheng, Z. , Sun, W. , Wang, J. , Wang, Y. , Yang, X.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.1 Å

Literature

Cryoem structure of hpacas9-sgrna-dsdna in the presence of acriic4

Cheng, Z. , Sun, W. , Wang, J. , Wang, Y. , Yang, X.

Primary Citation of Related Structures: 8HNV


Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR-associated endonuclease Cas9 A 1055 Eurotium Amstelodami , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SMENKNLNYILGLALGIASVGWAVVEIDEKENPLRLIDVGVRTFERAEVPKTGESLALSRRLARSARRLTQRRVARLKKAKRLLKSENILLSTDERLPHQVWQLRVEGLDHKLERQEWAAVLLHLIKHRGYLSQRKNESKSENKELGALLSGVDNNHKLLQQATYRSPAELAVKKFEVEEGHIRNQQGAYTHTFSRLDLLAEMELLFSRQQHFGNPFASEKLLENLTALLMWQKPALSGEAILKMLGKCTFEDEYKAAKNTYSAERFVWITKLNNLRIQENGLERALNDNERLALMEQPYDKNRLFYSQVRSILKLSDEAIFKGLRYSGEDKKAIETKAVLMEMKAYHQIRKVLEGNNLKAEWAELKANPTLLDEIGTAFSLYKTDEDISAYLAGKLSQPVLNALLENLSFDKFIQLSLKALYKLLPLMQQGLRYDEACREIYGDHYGKKTEENHHFLPQIPADEIRNPVVLRTLTQARKVINGVVRLYGSPARIHIETGREVGKSYKDRRELEKRQEENRKQRENAIKEFKEYFPHFAGEPKAKDILKMRLYKQQNAKCLYSGKPIELHRLLEKGYVEVDAALPFSRTWDDSFNNKVLVLANENQNKGNLTPFEWLDGKHNSERWRAFKALVETSAFPYAKKQRILSQKLDEKGFIERNLNDTRYVARFLCNFIADNMHLTGEGKRKVFASNGQITALLRSRWGLAKSREDNDRHHALDAVVVACSTVAMQQKITRFVRFEAGDVFTGERIDRETGEIIPLHFPTPWQFFKQEVEIRIFSDNPKLELENRLPDRPQANHEFVQPLFVSRMPTRKMTGQGHMETVKSAKRLNEGISVIKMPLTKLKLKDLELMVNREREKDLYDTLKARLEAFNDDPAKAFAEPFIKKGGAIVKSVRVEQIQKSGVLVREGNGVADNASMVRVDVFTKGGKYFLVPIYTWQVAKGILPNKAATQYKDEEDWEVMDNSATFKFSLHPNDLVKLVTKKKTILGYFNGLNRATGNIDIKEHDLDKSKGKQGIFEGVGIKLALSFEKYQVDELGKNIRLCKPSKRQPVR
anti-CRISPR protein AcrIIC4 E 89 Eurotium Amstelodami , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SMKITSSNFATIATSENFAKLSVLPKNHREPIKGLFKSAVEQFSSARDFFKNENYSKELAEKFNKEAVNEAVEKLQKAIDLAEKQGIQF

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
sgRNA b 128 NA GGUCACUCUAACAUUUAAUCACACGUUGUAGCUCCCUUUUUCGAAAGAAAAACGUUGUUACAAUAAGAGAAAAGAUUUCUCGCAAAGCUCUGUCCCUUGAAAUGUAAGUUUCAAGGGACAUCUUUUUC
target strand c 35 NA TGAAATCATATGTGTGATTAAATGTTAGAGTGACC
non-target strand d 35 NA GGTCACTCTAACATTTAATGTGTGATATGATTTCA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-12-08
Deposition Author(s): Cheng, Z. , Sun, W. , Wang, J. , Wang, Y. , Yang, X.