Cryo-em structures and translocation mechanism of crenarchaeota ribosome
PDB DOI: 10.2210/pdb8hl3/pdb
Classification: RIBOSOME Organism(s): Sulfolobus Acidocaldarius Dsm 639
Deposited: 2022-11-28 Deposition Author(s): Wang, Y.H. , Zhou, J.
Cryo-em structures and translocation mechanism of crenarchaeota ribosome
Primary Citation of Related Structures: 8HL3
Nucleic Acids / Hybrid | ||||
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Molecule | Chains | Sequence Length | Organism | Sequence |
23s rRNA (3000-MER) | a23s | 3022 | NA | GCCGAAGCCUCCCGGUGGAUGGCUCGGCUCGGGCACCGAAGAAGGGCGCGGCAAGCAGCGAAAUGCUCGGGUGAGGCGCAAGCAGCCGUUGACCCCGAGGUCCCCUAAUGGGAUAUCCUGCCGGGUUUCCGGCGCUCCCGGUUUAUAACUGGGAGUGGGAACCCCCCGAACGGAAACAUCUUAGUAGGGGGAGGAAAAGAAAUCAAUUGAGAUCCCCUGAGUAGGGGCGACCGAAAGGGGGACAGCCCAAACUAAACCUGCCGAUGAUAAGUCGGUGGGGAUGUGGUGUUACGACCUCUAGCCUGAGGUUCGACCUCGGCUUUCCUAACCUAUCUAGCCGAACUCCCCUGGAACGGGGGGCCAUAGAGGGUGAAAGCCCCGUAGGCUAAAGAUAGGUGGAAAGUGGCUAGAGGUAGAGUACCAUCCCCUGGUUUGGGGGUGGGAAGUUAGGGGACACGUGCCUCUAAGGCUAAAUAUGUCCCGAGACCGAUAGCAAACUAAGUACCGUGAGGGAAAGCUGAAAAGAACCCCGGAAGGGGGAGUGCAAAGAGCCUGAAACCGGGUGGUUAUACAGGGUGUGGCUCGAAAGAAGUGAACCCUUCCGAAGGAAAGGGGCGCAAGCCCUUAGUACGAGGAAGGGCGAUCGGGGUCACGCCUUUCGUCUUGAAACACGGGCCGGGGAGUUCACAUCAGUGGCGAGCUUAAGGAGAUUAUCUCCGAAGGCAUAGGGAAACCAAGUGCCCGCAGCCUAGUUUCUAGGCGAGGGGCAGGGUCUGUCAGGGCCUGAAGCCACUGAUGUGAGGCUAGAAACCGGGCGAUCUAGUCCGGGGCAGGCUGAAGGUGGGGGAAACCCCACUGGAGGGCCGAAUAGGGGUUCUGACGUGCAAUUCGUUCCCUUGACCUCGGACUAGGGGCAAAAGACCAAUCUAGCCCGGUGAUAGCUAGUUCCCCCCGAAAUGCGUCCUAGCGCAGCCUCCCUAAAGGCAGCUCGCGGGGUAGAGUGACAGAUCGGGGGCUCCAGGCGAAAGCCUGGGGCUUCCGGUCUAACUCCGAACCCACGAGCGCCGAAGAAGGGGGGAGUGGGUCACUCGGCGUAAGGUUGGGUGGCAAAAGGGGAACAACCCAGACCUGGGUUAAGGCCCCAAAGUCCCGGCUAAGUGCCAACGAAAAGGCGUCUCCAGCCUUAGACAGCGGGAAGGUGGGCCCAGCAGCAGCCAUCCUCUAAGGAGUGCGUAACAGCUCACCCGCCGAGGCUGGAGGCCCUAAAGAUUGGUCGGGGCUCAAGCCGGGCGCCGAGACCCAGGAGGGGGUCUCUACUAGAGAUCCUCUGGUAGGGGGGCGCUGUGAUGGGGUAGAAGGUGGGUCGUGAGAUCCACUGGACCCGUCACAGGUGCAGAUCCCGGCGGUAGUAACAGCGAAGGGGGGUGAGAAUCCCCCUCGCCGGAAGGGCAAGGGUUUCCCGGCAACGUUCGUCAGCCGGGAGUUAGCCGGUCCUAAGGUAGGGCCUAAUAGGUACCUACCGAAAGGGAAAGGGGUUAACAUUCCCCUGCCUCCCGGGUAGGUGCGGUAACGCAAGCCAGACUCCUGACGGAUUGGGGUAGGGAGAGUAGGACCACCGUCCUACCCAAGCACUCAAGCCCUUGGAGAGCCGUAACGGUGAGAAGAGGGCGAAGGUGUGAUGGGCCUUCCGUUAGGAGGGUUCUCCUGAUCCCUAGUCCCCAUGAAAAGGGAGUCUGGAACGAUCCCGGGAGACCGUACCUAGAACCGACACUGGUGCCCCUGGGUGAGAAGCCCAAGGCGUCUGAGGGGUAACCCAGGCUAGGGAACUCGGCAAAUUAGCCCCGUAACUUCGGGAGAAGGGGUGCCUAUCGUGGUUUAACAAAGCCACGAUAGGUCGCAGUGACCAGAGGGACCUGACUGUUUAAUAAAAACAUAGGUCCCCGCUAGCCCGAAAGGGUGUGUACGGGGGCUAAAUCCUGGCCACUGGUGGUUGGUUAAAUCCGGGUUCAACCGGGCGAAGCCCCACCGAAGGCCGGGGGUAACUCUGACCCUCUUAAGGUAGCCAAAUGCCUUGCCGGGUAAGUUCCGGCGCGCAUGAAUGGAUCAACGCGGUCCCUACUGUCCCAGCCUGGGGCCUCGUGAACGCCCUGAGCCGGUGCACAGUCCGGCAUCUCCCUACACCGAGAGAAGACCCCGUGGAGCUUCACCGCAGCCUGGCGUUGUCCCUCGGGCGUUUAUGCGUAGAGUAGGUGGGAGGGGUCGAACCUGUCCUUUCGGGGGCAGGGGACCCGAAAGUGAAACACCACCCAUGGACGCUCGAGGGACUAACCUCUCGAAAGAGAGGAACAACGUCAGGUGGGCGGUUCGGCUGGGGCGGCACUCCCGCGAAAAGAUAACACGGGAGCCCAAAGGUCGGCUCAGGCGGUACAGAACGCCGCCGUAGAGCGCAAGGGCAAAAGCCGGCCUGACGUGACCCUUCCAAGUACGGGGUCACGACGCGAAAGCGGGGCCUAGCGAACGCUCGUGCCCCCACACGUGGGGGCCGGGCAUGACAGAAAAGUUACCCCGGGGAUAACAGGGUCGUCGCGGGCGAGAGCUCACAUCGACCCCGCGGUUUGCUACAUCGAUGUCGGCUCUUCCCACCCUGGAGGUGCAGCUGCCUCCAAGGGUAGGGCUGCCCGCCCGUUAAAGGGGAGCGUGAGCUGGGUUUAGACCGUCGCGAGACAGGUCGGACUCUAAGGGUAGGGAGUGCGGACCGCUUGAGGGGAAGGAACCCCUAGUACGAGAGGAACAGGGUUCCGGGGCCUCCAGUUUACCGGUUGUCCGGUAGGGCAAUGCCGGGCAGCCGCGCCCUGAGGGGUAACCGCUGAAAGCAUCUAAGCGGGAACCCCUCCCCUAAAAGAGGCGGUCAGGCGUUAGCCGGGGCCUUCCCCUAGAAGAGGGGGUUGAUGGGGUGGGGAUGUAAGCUCCAAGGUUGUAAGACCGAGGAGUUUAGUCCGCCACUCCCAAUCAGGCUCCCCCC |
16s rRNA (1493-MER) | a16s | 1503 | NA | CGCCCCGAUUCCGGUUGAUCCUGCCGGACCCGACCGCUAUCGGGGUAGGGAUAAGCCAUGGGAGUCUUACACUCCCGGGUAAGGGAGUGUGGCGGACGGCUGAGUAACACGUGGCUAACCUACCCUCGGGACGGGGAUAACCCCGGGAAACUGGGGAUAAUCCCCGAUAGGGAAGGAGUCCUGGAAUGGUUCCUUCCCUAAAGGGCUAUAGGCUAUUUCCCGUUUGUAGCCGCCCGAGGAUGGGGCUACGGCCCAUCAGGCUGUCGGUGGGGUAAAGGCCCACCGAACCUAUAACGGGUAGGGGCCGUGGAAGCGGGAGCCUCCAGUUGGGCACUGAGACAAGGGCCCAGGCCCUACGGGGCGCACCAGGCGCGAAACGUCCCCAAUGCGCGAAAGCGUGAGGGCGCUACCCCGAGUGCCUCCGCAAGGAGGCUUUUCCCCGCUCUAAAAAGGCGGGGGAAUAAGCGGGGGGCAAGUCUGGUGUCAGCCGCCGCGGUAAUACCAGCUCCGCGAGUGGUCGGGGUGAUUACUGGGCCUAAAGCGCCUGUAGCCGGCCCACCAAGUCGCCCCUUAAAGUCCCCGGCUCAACCGGGGAACUGGGGGCGAUACUGGUGGGCUAGGGGGCGGGAGAGGCGGGGGGUACUCCCGGAGUAGGGGCGAAAUCCUUAGAUACCGGGAGGACCACCAGUGGCGGAAGCGCCCCGCUAGAACGCGCCCGACGGUGAGAGGCGAAAGCCGGGGCAGCAAACGGGAUUAGAUACCCCGGUAGUCCCGGCUGUAAACGAUGCGGGCUAGGUGUCGAGUAGGCUUAGAGCCUACUCGGUGCCGCAGGGAAGCCGUUAAGCCCGCCGCCUGGGGAGUACGGUCGCAAGACUGAAACUUAAAGGAAUUGGCGGGGGAGCACCACAAGGGGUGGAACCUGCGGCUCAAUUGGAGUCAACGCCUGGAAUCUUACCGGGGGAGACCGCAGUAUGACGGCCAGGCUAACGACCUUGCCUGACUCGCGGAGAGGAGGUGCAUGGCCGUCGCCAGCUCGUGUUGUGAAAUGUCCGGUUAAGUCCGGCAACGAGCGAGACCCCCACCCCUAGUUGGUAUUCUGGACUCCGGUCCAGAACCACACUAGGGGGACUGCCGGCGUAAGCCGGAGGAAGGAGGGGGCCACGGCAGGUCAGCAUGCCCCGAAACUCCCGGGCCGCACGCGGGUUACAAUGGCAGGGACAACGGGAUGCUACCUCGAAAGGGGGAGCCAAUCCUUAAACCCUGCCGCAGUUGGGAUCGAGGGCUGAAACCCGCCCUCGUGAACGAGGAAUCCCUAGUAACCGCGGGUCAACAACCCGCGGUGAAUACGUCCCUGCUCCUUGCACACACCGCCCGUCGCUCCACCCGAGCGAGAAAGGGGUGAGGUCCCUUGCGAUAAGUGGGGGAUCGAACUCCUUUCCCGCGAGGGGGGAGAAGUCGUAACAAGGUAGCCGUAGGGGAACCUGCGGCUGGAUCACCUCAUAU |
5s rRNA (122-MER) | a5s | 122 | NA | UGCCCACCCGGUCAUAGUGAGCGGGUAACACCCGGACUCGUUUCGAACCCGGAAGUUAAGCCGCUCACGUCAGAGGGGCCGUGGGAUCCGAGAGGGCCCGCAGCCUCUCUGAGCUGGGAUGG |
tRNA (76-MER) | aptn | 76 | NA | GCCCGGAUAGCUCAGUCGGUAGAGCAGGGGAUUGAAAAUCCCCGUGUCCUUGGUUCGAUUCCGAGUCCGGGCACCA |
tRNA (76-MER) | aetn | 76 | NA | GCCCGGAUAGCUCAGUCGGUAGAGCAGGGGAUUGAAAAUCCCCGUGUCCUUGGUUCGAUUCCGAGUCCGGGCACCA |
mRNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') | amrn | 13 | NA | UUUUUUUUUUUUU |
Proteins | ||||
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Molecule | Chains | Sequence Length | Organism | Sequence |
50S ribosomal protein L18Ae | ALX0 | 76 | Sulfolobus Acidocaldarius Dsm 639 | VKIFMVRGTAIFSASRFPTSQKFTKYVRALNEKQAIEYIYSQLGGKNKIKRYNIHIQEIKEVKEDEITDKTIRDLA |
50S ribosomal protein L10e | L10E | 164 | Sulfolobus Acidocaldarius Dsm 639 | RPGRCYRKFSGPAYTRREYIPGIPMPKITKFVMGNVNGDYDYELRLITTEKGQIRHNALEAARVIALKYLSKKLASEQNFALVVTKYPHHVIRENKMMAFAGADRLQDGMRLSFGKPIGTAARLEKLGELVMYVRVKKEHLEAAKEALKIASSKLPIRTKIEIS |
50S ribosomal protein L13 | L13P | 140 | Sulfolobus Acidocaldarius Dsm 639 | VIVDATNQILGRMSTHIAKLLKSGKKVYVVNAEKAIISGPRSRVLEGYSLLFTVKTMQNPYRQGIRRPRNPINIVKRTVRGMLPKNKLGKQIYRNLKAYIGIPKELEGKSMIRFDDADVSRLKGKYITVAELSRLLGGLK |
50S ribosomal protein L14e | L141 | 86 | Sulfolobus Acidocaldarius Dsm 639 | AIEIGRICVKTRGREAGKKCVIVDIIDSNFVLVTGPKEINGVKRRRVNILHIEPTDKKVEINKGATDQEVKQAIEQSGLTDFIKEA |
50S ribosomal protein L14e | L142 | 86 | Sulfolobus Acidocaldarius Dsm 639 | AIEIGRICVKTRGREAGKKCVIVDIIDSNFVLVTGPKEINGVKRRRVNILHIEPTDKKVEINKGATDQEVKQAIEQSGLTDFIKEA |
50S ribosomal protein L14 | L14P | 134 | Sulfolobus Acidocaldarius Dsm 639 | MNVLGSRKGFTPALQHNSSVVVADNSGAKEAVIIGIYGYRGVLRRVPFANIADLVMVSVRKGSPDVRKQKFKAVIVRQRMPFRRPDGTWISFEDNAVVIINPDGTPKGTEVRGPIAREAAERWPKIASVATMVI |
50S ribosomal protein L15e | L15E | 169 | Sulfolobus Acidocaldarius Dsm 639 | SMYHYIEQTWQNKDWRRSILRKRLIEWRRQPAITRIDRPTRLNRARALGYKAKQGFVMVRVRVRRGGLNKPRPNSGRRPKRMGVYGYGPSKGYRWIAEERAARKFPNLEVLGSYYVAEDGMYKYYEVIMVDYSHPVIRSDPELKWLQDSVNRKRVFRGLTSAGQKSRGL |
50S ribosomal protein L18e | L18E | 112 | Sulfolobus Acidocaldarius Dsm 639 | TNIMLRKLITSLKKQDKAIWVRVAEELEAPRRKRAYINIYKINRYSKANDIIVVPGKVLGVGNLDHPVTVVALSFSKPAKEKILRSGGKVMSLYKAIQELNDFKGKTVRLMK |
50S ribosomal protein L18 | L18P | 193 | Sulfolobus Acidocaldarius Dsm 639 | TQGPNYRIKFRRRREGKTDYYTRYTYVINNAIRFVPRLTNKYVIVSVSKFDQKGDIMIAYAHSIELVKKYGWKGDTNNTPAAYLTGYLAGLRAVKSGVKAAVSDIGLFVPVKGGRIFAVIKGAIDAGLKVPVGDLGKLKDRVNGSHISAYAQKLKNENQELYNKLFSSYIQRGLDPVLLPQHFEEVLNKIKEN |
50S ribosomal protein L19e | L19E | 144 | Sulfolobus Acidocaldarius Dsm 639 | PEFQLQRRLAADIAGVGLNNIKFNPERLEEVEEALTREDIKKLIKERAVIVNPKRGISSGRLKERKHKRRSKGEGRKHGSRKGKSGARTGDKEIWINKIRKIRRYIRWLRDNNVIDKHTYRLLYKRAKGNYFKNLSDVKSYLRQ |
50S ribosomal protein L22 | L22P | 150 | Sulfolobus Acidocaldarius Dsm 639 | YPILSIPEDKLAKAVIKNIDASVRDLYNVCKAIRGMNLKEAREFLNNVLEEKEALPFWRYSHGTSHRSNISRKWKVKSGRYPKKAIKYVLKLLDNAENNANSKGLDIDNLKIVHIAAHKGLVLKRYMTRAFGRSTRKYKYLSHIEVILGE |
50S ribosomal protein L23 | L23P | 81 | Sulfolobus Acidocaldarius Dsm 639 | IIKEFLATEKAVKLIESQNTLTIIVNRNTTKKDIKNEVEKLFSVKVEKINTLITPKGEKKAYVKLKQEYKASDVAHKLGML |
50S ribosomal protein L24e | L24E | 54 | Sulfolobus Acidocaldarius Dsm 639 | RQCSFCGKDILPGTGLMYVRNDGSLLWFCSSKCRKSMLKLHRDPKKLKWTKSYL |
50S ribosomal protein L24 | L24P | 122 | Sulfolobus Acidocaldarius Dsm 639 | MISSKPSKQRKLVYNLPNHLRYKLLTARLSEDLEKQYGIKRISIRKGDSVKLMRGSQVGYEGKVVEVDRKRGRVAIEGLTKKKADGTPVYVWVHASKVIITKLDTGDKERMDAIERKRKMRE |
50S ribosomal protein L29 | L29P | 63 | Sulfolobus Acidocaldarius Dsm 639 | PLEVDELRKMDLKQLKERLNELEMQLLKLRVESRMGTLKNTASIKNTRKDIARILTVIGEKSK |
50S ribosomal protein L30e | L30E | 94 | Sulfolobus Acidocaldarius Dsm 639 | FEGELKTLLRSGKVILGTRKTLKLLKTGKVKGVVVSSTLRQDLKDDIMTFSKFSDIPIYLYKGSGYELGTLCGKPFMVSVIGIVDEGESKILEF |
50S ribosomal protein L30 | L30P | 155 | Sulfolobus Acidocaldarius Dsm 639 | MNELIGVIRIRGWAATPWYIQDTLSMLRLKNAFNAMIYPKDSSIQGMLNLVSSYVTWGELNDEGLRLLVSKLEISRGKKVNEEYVKDKLNVDFQSFVESIKDGKLRLNKLDEIFSLPIRLHPPKGGFKGKVSRPFRAGGEFGYRGDKINELIRRM |
50S ribosomal protein L31e | L31E | 75 | Sulfolobus Acidocaldarius Dsm 639 | KPEKENFEMVINFRRVIMGRKTTRTKRAIKYVRYMVKRHFGAEKVIIDPLLAKAITMNGRDKIVRRVRIAVKRIG |
50S ribosomal protein L32e | L32E | 123 | Sulfolobus Acidocaldarius Dsm 639 | KPAKKNMKSPGKAIKFLRFDWDKYYRIGRQERWRKPRGIDNAIRLELKGYQPKVKIGYRTDKQIRGLHPSGLRPILVKSVKDLEAFAKGKQDVIIIISSTIGLRKRIELIKKAEELGLKIANR |
50S ribosomal protein L34e | L34E | 77 | Sulfolobus Acidocaldarius Dsm 639 | SPQQRSGSFRKVFVKLPSGKSTIHYERRKDNIARCGMCKKPLNGVKNNYTYKYSKTEKRPERVYGGYLCHKCLESLI |
50S ribosomal protein L37Ae | L37A | 65 | Sulfolobus Acidocaldarius Dsm 639 | TGIAGRFGARYGSSTRKKWKEVMERRYMPHQCPYCKTTGKVVRIASGIWYCRKCETKWAGLAYTP |
Elongation factor 2 | AEFG | 729 | Sulfolobus Acidocaldarius Dsm 639 | VEQVLSLMKDVTRVRNIGIIAHVDHGKTTTSDTLLAASGIISQKVAGEALALDYLSVEQQRGITVKAANISLYHEIDGKGYVINLIDTPGHVDFSGRVTRSLRVLDGSIVVIDAVEGIMTQTETVLRQSLEERVRPILFINKVDRLIKELKLSSQEIQKRLIDLIIEVNNLIETYGEPEFKDQWKIKPELGNVVFGSAKDKWGFSVPMAGKRGVKFSDVVNAYTSGDKAKIEELASKVPIHEALLDAVIKFVPNPRDSQKYRIPKIWKGDLDSEIAKAMINADPNGPIVMMINDMKVDPHAGLVATGRVFSGTLRAGEEVWLVNAKRQQRILQVSLYMGAIRELAEEIPVGNIAAALGMDAARSGETGVDIRFKDSVLGSFEKLHYISEPVVTISVEPRNPKDLTKMIDALRKLSIEDSNLVVKINEETGEYLLSGMGFLHLEVSLQLLKENYGLDVVTTPPIVVYRESIRNKSQVFEGKSPNKHNKLYISVEPLNNQTIDLIANGTIKEDMDNKEMAKILRDQAEWDYDEAKKIVAIDENINVFIDATSGVQHLREIMDTLLQGFRLAMKEGPLAFEPVRGVKVVLHDAVVHEDPAHRGPAQLYPAVRNAIFAGILTSKPTLLEPLQKLDIRIPMEYLGNVTAVITRKRGKVINVVQTGNVARVYAEIPVGESFELASELRASSAGRAFWGTEFSRWAPVPDSILVDLIMKIRERKGKPKQLPKVEDF |
50S ribosomal protein L37e | L37E | 54 | Sulfolobus Acidocaldarius Dsm 639 | MKGTPSFGKMNKTPTHVRCRRCGRNSFNARKGYCAACGFGRSKKIRRYSWQNKK |
50S ribosomal protein L39e | L39E | 49 | Sulfolobus Acidocaldarius Dsm 639 | KHKSLGKKLRLGKALKRNSPIPAWVIIKTQAEIRFNPLRRNWRRNNLKV |
50S ribosomal protein L40E | L40E | 55 | Sulfolobus Acidocaldarius Dsm 639 | MPLTDPVKLQIVQQRVFLKKICRDCGALNSIRATKCRRCHSSNLRAKKKELPAKK |
50S ribosomal protein L44e | L44E | 92 | Sulfolobus Acidocaldarius Dsm 639 | MKVPKVIKTYCPKCKTHTEHSVSLYKGGKRRSLAEGQRRYERKNVGYGSKRKPEQKRFAKTTKKQTLVLKCQKCSYTIVKEGMRLKKLELVE |
50S ribosomal protein L7Ae | L7A1 | 123 | Sulfolobus Acidocaldarius Dsm 639 | PSYVKFEVPQELADKVLEAVKKAKDSGKIKKGTNETTKAVERSQAKLVVIAEDVQPEEIVAHLPLLCEEKKIPYVYVPSKKSLGEACGLQVAAASVALMDPGEAKDLVDEIVKRVNEIKGKSS |
50S ribosomal protein L7Ae | L7A2 | 123 | Sulfolobus Acidocaldarius Dsm 639 | PSYVKFEVPQELADKVLEAVKKAKDSGKIKKGTNETTKAVERSQAKLVVIAEDVQPEEIVAHLPLLCEEKKIPYVYVPSKKSLGEACGLQVAAASVALMDPGEAKDLVDEIVKRVNEIKGKSS |
50S ribosomal protein L7Ae | SL7A | 123 | Sulfolobus Acidocaldarius Dsm 639 | PSYVKFEVPQELADKVLEAVKKAKDSGKIKKGTNETTKAVERSQAKLVVIAEDVQPEEIVAHLPLLCEEKKIPYVYVPSKKSLGEACGLQVAAASVALMDPGEAKDLVDEIVKRVNEIKGKSS |
50S ribosomal protein L15 | L15P | 144 | Sulfolobus Acidocaldarius Dsm 639 | MVVRKEKKSRKYRGYRTHGWGTKGQHRDRGAQGGRQIGMHKEKWSWTVKFGEGWYGKHGFRNPTSKLVNAIGLRKLQEYIDNDKIKIEEENGKKVVDLAKYGYDKLLGGGNLRLPLVIKVAKATEKAKERVKEIGGEIILTSSE |
50S ribosomal protein L21e | L21E | 97 | Sulfolobus Acidocaldarius Dsm 639 | VARSKGYRSKTRKLLEKKVREKGAIPKLSLLMHDYSQGEYVVVKINPSIHKGMPHRRYHGKVGLVVGKRGKAYEVKVNIGDKERVLIVRPEHLIPFN |
DUF2280 domain-containing protein | L45A | 101 | Sulfolobus Acidocaldarius Dsm 639 | MKVVKYVLTAKIDYDGKEIEIKRSFRHRKNIFEFLKNADSNLKGALSEYAKQNKVKSSDLPLNEFITCGEIEEEQGVMRTECKGKEKVSVKIEVQTQKIAK |
Conserved protein | L46A | 70 | Sulfolobus Acidocaldarius Dsm 639 | MLKHQKYVYVDIGDQKKFLKVRFLKSRSENNNPEAYVILDKISIKLPRNAKVIKYEDLPAEVKDKLKLKL |
50S ribosomal protein L47A | L47A | 80 | Sulfolobus Acidocaldarius Dsm 639 | MKISNVESKYSMKVRGQELLIEEARNEKGEKIIIFQSLTSAKLLNNEEWKENTTDAKNVEKREDLPQDVRKITGKILSLI |
50S ribosomal protein L1 | AL1P | 216 | Sulfolobus Acidocaldarius Dsm 639 | LADKESLIEALKLALSTEYNVKRNFTQSVEIILTFKGIDMKKGDLKLREIVPLPKQPSKAKRVLVVPSFEQLEYAKKASPNVVITREELQKLQGQKRPVKKLARQNEWFLINQESMALAGRILGPALGPRGKFPTPLPNTADISEYINRFKRSVLVKTKDQPQVQVFIGTEDMKPEDLAENAIAVLNAIENKAKVETNLRNIYVKTTMGKAVKVKR |
30S ribosomal protein S2 | AS2P | 196 | Sulfolobus Acidocaldarius Dsm 639 | ELLVPLDTYLSAGVHIGTHTCTRYMERFIYRVRPEGLYVLDVRKIDERLRVAAKFISRFRPEAVLTVASRPYAFTPVQKFSEVVRGKEISGRFPPGTLTNPYLDNYIEPEVLIVTDPRTDLQAIKEASKVGIPIVAFTDTDARVDFIDVIIPANNKGRKSLALLYWVLARQILRERKEIPLDGDIPLRVEDFETRL |
30S ribosomal protein S4e | AS4E | 240 | Sulfolobus Acidocaldarius Dsm 639 | VHITRFEAPWFLKVGKKEYKWIIRSRAGPHKIQESVPLAILLKYYLKAVDTTREAKRIIFDGKVLVDGKVRRDYKYPVGLMDVVEIPSADLRVRIIPDNVRYLTTINISREDAKYKFVRIMNKTTLKSGVLQLNLEDGRNILLKGEELSQYNLPTLTTLKIELPEQKITTAYTIKEGVYAMIIGGRNAGLHGKISKIQLAKYKRIKYSLVTLEGKDGSTFQTNLINVMAIGENEADSNLG |
30S ribosomal protein S4 | AS4P | 166 | Sulfolobus Acidocaldarius Dsm 639 | DPRKSKKKWMGPSHPWIKINLGKEQILIGKYGLRNKKEIWIAQTMIRNFRHQARSLLALPPAERNIREKQLIQKLYRMGILEKDNSTLDDILSLTEENYLERRLQTIVYKKGLARTIYQARQLITHGHIAISGRKVTSPGYVVLRGEEDLIDYYPTSPFKQNPPSQ |
30S ribosomal protein S5 | AS5P | 204 | Sulfolobus Acidocaldarius Dsm 639 | EDWKPRTKVGQLIKEGKINSMKELFERNLPIVEPEIVDVLLPKLRYDIVDIGIVQKQTDAGELSRYKVLIVMGNMDGYISYGTGKAKQLRVAIQKAIRDAKMRIIPVRRGCGSWECTCGESHSLPFIVSGKAGSVEVTLLPAPKGTGLVVGSVLKTFLSLAGLKDVWSRTKGSTYTHENFIKAAYIALYNTYRFVTPVDWGRMK |
30S ribosomal protein S6e | AS6E | 105 | Sulfolobus Acidocaldarius Dsm 639 | ALAYRTRAFQLSLDQSKLPNLVGTKIGDVIDINVSGVNLKLKITGGSDNSGFSMRFDVGGGAKRKILVSGPPGYYPKEDGLRRKRTVRGNMITPEIVQINTIMIR |
30S ribosomal protein S8e | AS8E | 126 | Sulfolobus Acidocaldarius Dsm 639 | SYYQGNDSRKITGGQKGKNRDKRKYELGSPPTETKISDKDIKEKDRVAGGNFKLRLRYASYANVYDPQSKTAKKVKIISVLESPANREYARRGIIVKGTLIQTELGKAKVTSRPGQDGIINALLLR |
30S ribosomal protein S8 | AS8P | 130 | Sulfolobus Acidocaldarius Dsm 639 | INPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGKIIVQLLGRINKCGPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRDGIREKIGGVTLGYVY |
30S ribosomal protein S11 | S11P | 128 | Sulfolobus Acidocaldarius Dsm 639 | REIRWGNARIYASQNNTIITITDITGAEIISKASGGMVVKADREKPSPYAAMLAANKAANDAFDKGISAIHIKVRAQGGYGSKTPGPGAQPAIRALARAGFIIGRIEDVTPLPHDTIRRPGGRRGRRV |
30S ribosomal protein S12 | S12P | 143 | Sulfolobus Acidocaldarius Dsm 639 | GSKSPKGLFAARKLRLKRLKFSWSQRSFKRRMLALKEKFDPLEGAPMARGIVLEKVGIESRQPNSAVRKAVRVQLVKNGRIVTAFVPGDGGVNFIDEHDEVVIAGIGGTLGRSMGDLPGVRYKVVMVNGVSLDALYKGKKQKP |
50S ribosomal protein L2 | AL2P | 234 | Sulfolobus Acidocaldarius Dsm 639 | GKKLLQQRAGRGGINFRSPSWRRVGPARYPNIEGDHKGKIIDILHNPGVTAPVVKVKLDNGLQFYIPAVQGVAVGQEISIGKNATISNGNIVEVGQLPEGTVICNVEKLKGDGGKFARAAGSYAVISGKAGNKVLIKLSSEKIVEVSQNARATVGIIAGGGFVEKPLLKAGNNYWKYRVRAVKWPVVRGVAMNAVSHPHGGGLHQSVSRPSTVSRNAPPGRKVGHIASRRTGRR |
30S ribosomal protein S15 | S15P | 149 | Sulfolobus Acidocaldarius Dsm 639 | MNKKRAKGNSHSIRPVRSGPPKWVRFTREEVELLVEELAKRGYPPSMIGMVLRDQYGVPLVKQITGRKLTAILQDRNMKPKIPEDLFNLMRRAVNIRRHLFEYPKDKSAKRGLEEVESKIRRLASYYKETGKLPQEWSYDPAKAELLVT |
30S ribosomal protein S17 | S17P | 111 | Sulfolobus Acidocaldarius Dsm 639 | KKGQLVKNVGIEGVSAPSKTCDDEYCPYHGSLKVRGIVLEGKLIRARANRTGTVEREYIFYDSKYKRYERRRSRIHVHIPSCLEVKEGDNVIIGESRPIAKSISFVILGVK |
30S ribosomal protein S24e | S24E | 96 | Sulfolobus Acidocaldarius Dsm 639 | VSDKVEGIVERDIQNNVANRRELYIKLFHIGSGTPSRKELVKAIASTFSTAEDLVVVKKVFTNYGSGISYARVNVYKDKDSLQKLEPQYLIGRDTG |
30S ribosomal protein S27e | S27E | 59 | Sulfolobus Acidocaldarius Dsm 639 | MKAKFKILIPEPKSKFIRVKCRQCNNEQVIFSNATFPVRCLSCGAQIVIPKGGKAKIEG |
30S ribosomal protein S3Ae | S3AE | 189 | Sulfolobus Acidocaldarius Dsm 639 | IRDKWKLKKWYVITAPKVFGEALLGSTPAYDINKALSRKIEVTLYDLTGDYNLVYIHLYFKILGNISGDKLSTIFYGHELSRDYIRSLVRRKSSKINAVVDVTTKDGYMLRVKGLVLTTYRAHISQKTAIRKVISDITRKKAEESDFDQFVQDVIFGKLSNDIFQEAKKIYPLRKVEIEKTKLLKAPKV |
30S ribosomal protein S3 | AS3P | 201 | Sulfolobus Acidocaldarius Dsm 639 | VLIKRHFLQKAAIKVMVDEYLAKQFYNAEYAGVEIVKTPIGTRVIIYAGRPPLIIGKGGKTIKQLAQVLEKFFGLENPQITVTAAENPELNARVMAFRLAIALEKGYHFRRAAFITIRRIMSSGAVGAEVIVSGKLTSERAKYEKLKEGTVYKSGQQLEKIIDRAIGIAMLKPGVYGVEVVITKPTRSIDKIELKEKVEKT |
30S ribosomal protein S7 | AS7P | 193 | Sulfolobus Acidocaldarius Dsm 639 | ENIEVSNLNVKVFGKWDTKVEVRDPSLKKYIDLMSIYLPHTGGRHEHRRFGKSRIPIVERLINNLMRPGRNKGKKMLAYNIVKTTFDIIAVKTGQNPIQVLVRAIENAAPREEVTRIMYGGIVYYVAVDVAPQRRVDLALRHLVTGASEASFNNPKPIEEALAEEIIAAANNDNKSVAIRKKEEIERIALSSR |
30S ribosomal protein S10 | S10P | 100 | Sulfolobus Acidocaldarius Dsm 639 | TKARIRLWSSNIDSLNFVVNQIRNMAQKTGIQVSGPIPLPTTRMEVPVMRLPHGEGKKKWEHWEMKVHKRIIDIAADERVMRQLMRVRVPDDVYIEIELI |
30S ribosomal protein S13 | S13P | 147 | Sulfolobus Acidocaldarius Dsm 639 | QQQFKYIVRLFGQDVDGTMKLPYALAMIKGIGYNTAMIIIRKLNLDKDKRLGEISDEDIKKIENLLNNKIIPESPNWIYNRQKDYESGADMHLVTSDLIFYVRNDIERERRSRSWRGVRHSLGLKVRGQRTRTTGRTGATIGVRRAK |
30S ribosomal protein S14 type Z | S14P | 52 | Sulfolobus Acidocaldarius Dsm 639 | KYKPPAERRFGKGVQLCKRCGSRDSVIQKYGLYLCRQCFREVAYPMGFRKTR |
50S ribosomal protein L3 | AL3P | 339 | Sulfolobus Acidocaldarius Dsm 639 | RKLSSPRRGSAGLRPRKRADEILPTPKNWPLVNLKEPKLLGFIGYKAGMTHVYMIDDKPTSPNYGKEVYTPVTIVESPPILGLALRAYHIDSKGELSVLVDYWANFEEGSLKYLKRKITSLKVDSSKMKEKLDLIQKNLNNITYMRLLVSTQPWLVPSLGKKRPEIVEIQIGGGSIQDQLNYGLSLLGKQIPVRDVFREGQLTDIIGVTKGKGFQGVIKRYSVVEFPRWHKHRKGSRKIGARGPSISTPSYVPQPGQLGFHRRTEYNKRIIKIGDNVNEINPAGGIVNYGLVKNTYLVIEGSVLGSRKRPLFLRYPIRPSWSPESAPKITYVNLASQQG |
30S ribosomal protein S17e | S17E | 62 | Sulfolobus Acidocaldarius Dsm 639 | GNVYTKDIKRVARELYDKFKDQASDKYDDNKKLVDEYVNVSSKKVKNRIAGYLTRYVKISKN |
30S ribosomal protein S19e | S19E | 150 | Sulfolobus Acidocaldarius Dsm 639 | TVQMVPADILIPKLAEYLKNNVKELNPPNWVYFAKTASFKERVPDDIENWWYIRAASLLRHLYIYKEPIGLQKTRKLYSGSKRRGTKPPRSVKAPTHSIRTILQQLEKAGLVTKTRRGRILSPKGRSLLDKLAYEMFKELAEKKQDLKKY |
30S ribosomal protein S19 | S19P | 115 | Sulfolobus Acidocaldarius Dsm 639 | WKKFRYRGKSLEDLLNMPMDEFIKLLPSRQRRSLKRGFSDKQRRLLEKIRKISREGKQNKVIKTHVRNMVILPEMVGLRFAVYNGKEFVEFQVVPEMIGRYLGEYSITTKKVEHG |
30S ribosomal protein S9 | AS9P | 136 | Sulfolobus Acidocaldarius Dsm 639 | QAEQNFMITYARRKSARASCYIKPGNGKVFVNDIPIEIIPIEVVRYKIMEPLVLAGDKITSSIEARIYTQGGGIMGQADAARMALARALVKFTNSKELVEIYKSYDRTMLAGDPRQTESEKWMRYSARRWRQKAYR |
30S ribosomal protein S28e | S28E | 63 | Sulfolobus Acidocaldarius Dsm 639 | GFPAEVIQILDRTGVTGEVTQVRVRVLEGRDKGRILTRNVKGPVRLGDILILRETEREARKLS |
30S ribosomal protein S27ae | S27A | 54 | Sulfolobus Acidocaldarius Dsm 639 | QSKAVVRTYYEVEQDSIKLKNKKCPRCGSIMAHHMKPLERWACGKCGYTEFIGK |
PHE-PHE-PHE-PHE-PHE-PHE | APTP | 6 | Sulfolobus Acidocaldarius Dsm 639 | FFFFFF |
50S ribosomal protein L4 | AL4P | 251 | Sulfolobus Acidocaldarius Dsm 639 | KVSVLDLKGNQLEEIELPLFFSYPVRKDLIRRVFLSEFTKSLQPKGRDPLAGKRTSALSFGINLGIARVPRVKGSGEAALAPNTVGGRLAFPPTTEKRLVEEVNLKEKKLGIISALAATADPNFVKARGHRFTSNNVPIILVDDFENISKAKEIMDILKSIGVVDDIKRVKESKGVRAGKGKMRGRRYQIAKGPLIVVSNHKSPVVESASNIPGVNVVSANLVSVIHLAPGGHPGRLTIYTKSSINILRQR |
50S ribosomal protein L5 | AL5P | 168 | Sulfolobus Acidocaldarius Dsm 639 | KENVMRRVVLDKVTVNIGVGESGERLQKAYQLVQELTGVKPVYTKGRKSIREFGVRKGAPIGVKATLRRQAAVEFLKKVLPAVNFRLKQSSFDNYGNVSFGIAEHVLIPGTRYDPEIGIFGMDVAITLVRPGYRTMKRKRKKASIPRRHRVTKEEAINFMKENFNVTI |
50S ribosomal protein L6 | AL6P | 181 | Sulfolobus Acidocaldarius Dsm 639 | LKAAYIREEIQIPDKVKVSLENNVLKVKGPKGEVIKDFSYAKGIRIQLNEGKIILETTFADRRKKALLYSIIAHIKNMITGTINGYRYYLKVISTHFPISVKVSGDEVQVSNLIGEKNIRRAKILPGVKVTVKGEDIVVEGSDIYNVAQTAANIESSTKIVGYDRRIFSDGIYIYKKEVIG |
Method: ELECTRON MICROSCOPY
Deposited Date: 2022-11-28 Deposition Author(s): Wang, Y.H. , Zhou, J.