8HES
Crystal structure of sars-cov-2 rbd and niv-10 complex
PDB DOI: 10.2210/pdb8hes/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2
Deposited: 2022-11-08 Deposition Author(s): Adachi, Y. , Anraku, Y. , Fukuhara, H. , Fukushi, S. , Hashiguchi, T. , Higuchi, Y. , Hoshino, A. , Kita, S. , Kotaki, R. , Kuroda, D. , Kuroda, Y. , Maeda, K. , Maenaka, K. , Moriyama, S. , Nakamura-Uchiyama, F. , Onodera, T. , Someya, T. , Suzuki, T. , Takahashi, Y. , Taminishi, S. , Tonouchi, K. , Yamamoto, T. , Yumoto, K.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.2 Å
Crystal structure of sars-cov-2 rbd and niv-10 complex
Adachi, Y. , Anraku, Y. , Fukuhara, H. , Fukushi, S. , Hashiguchi, T. , Higuchi, Y. , Hoshino, A. , Kita, S. , Kotaki, R. , Kuroda, D. , Kuroda, Y. , Maeda, K. , Maenaka, K. , Moriyama, S. , Nakamura-Uchiyama, F. , Onodera, T. , Someya, T. , Suzuki, T. , Takahashi, Y. , Taminishi, S. , Tonouchi, K. , Yamamoto, T. , Yumoto, K.
Primary Citation of Related Structures: 8HES
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| NIV-10 Fab H-chain | H | 249 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | EVQLVESGGGLVQPGGSLRLSCAASGFTFYSYWMTWVRQAPGKGLEWVANIKHDESESHYVDSVRGRFTISRDNAKNSVYLQMKGLRAEDTAVYYCARDGGYNILTAYYHAPSYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGSSLEVLFQGPLGHHHHHH |
| Spike protein S1 | C | 215 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | PTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKN |
| NIV-10 Fab L-chain | L | 217 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNFVSWYRQYPGKAPQLMIYDVSRRPSGDSDRFSGSKSGNTASLTISGLQAEDEAEYHCSSYTGRSPYVVFGGGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2022-11-08 Deposition Author(s): Adachi, Y. , Anraku, Y. , Fukuhara, H. , Fukushi, S. , Hashiguchi, T. , Higuchi, Y. , Hoshino, A. , Kita, S. , Kotaki, R. , Kuroda, D. , Kuroda, Y. , Maeda, K. , Maenaka, K. , Moriyama, S. , Nakamura-Uchiyama, F. , Onodera, T. , Someya, T. , Suzuki, T. , Takahashi, Y. , Taminishi, S. , Tonouchi, K. , Yamamoto, T. , Yumoto, K.