8H91
Crystal structure of sars-cov-2 spike receptor-binding domain in complex with nanobody n19
PDB DOI: 10.2210/pdb8h91/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Gammaretrovirus , Pyrobaculum Ferrireducens
Deposited: 2022-10-24 Deposition Author(s): Li, J. , Zhang, J. , Zhang, Y.T.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.07 Å
Crystal structure of sars-cov-2 spike receptor-binding domain in complex with nanobody n19
Li, J. , Zhang, J. , Zhang, Y.T.
Primary Citation of Related Structures: 8H91
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Spike protein S1 | A | 194 | Gammaretrovirus , Pyrobaculum Ferrireducens | NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP |
| Spike protein S1 | B | 194 | Gammaretrovirus , Pyrobaculum Ferrireducens | NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP |
| nanobody | C | 117 | Gammaretrovirus , Pyrobaculum Ferrireducens | QLQLVESGGGLVQAGGSLRLSCAASGGTFSRSGWFRQAPGKEREFVAAISRADVGFPNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAATSLQSGKYDYWGQGTQVTVS |
| nanobody | D | 117 | Gammaretrovirus , Pyrobaculum Ferrireducens | QLQLVESGGGLVQAGGSLRLSCAASGGTFSRSGWFRQAPGKEREFVAAISRADVGFPNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAATSLQSGKYDYWGQGTQVTVS |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2022-10-24 Deposition Author(s): Li, J. , Zhang, J. , Zhang, Y.T.