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8H0S

Crystal structure of mnmm from b. subtilis complexed with gln-ttg anti-codon stem loop and sam (2.90 a)

PDB DOI: 10.2210/pdb8h0s/pdb

Classification: TRANSFERASE/RNA
Organism(s): Ligusticum Chuanxiong , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2022-09-30
Deposition Author(s): Cho, G. , Kim, J. , Lee, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.9 Å

Literature

Crystal structure of mnmm from b. subtilis complexed with gln-ttg anti-codon stem loop and sam (2.90 a)

Cho, G. , Kim, J. , Lee, J.

Primary Citation of Related Structures: 8H0S


Proteins
Molecule Chains Sequence Length Organism Sequence
Putative rRNA methylase YtqB A 202 Ligusticum Chuanxiong , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MILKKILPYSKELLKMAAGEGDIVVDATMGNGHDTQFLAELVGENGHVYAFDIQESAVANTKERLGDMYQARTTLFHKSHDKIAESLPPETHGKVAAAVFNLGYLPGGDKSITTNGSSTIKAIEQLLSIMKDEGLIVLVVYHGHPEGKAEKNDVLEFCRDLDQQTARVLTYGFINQQNDPPFIVAIEKKAQISKGHHHHHHG
Putative rRNA methylase YtqB B 202 Ligusticum Chuanxiong , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MILKKILPYSKELLKMAAGEGDIVVDATMGNGHDTQFLAELVGENGHVYAFDIQESAVANTKERLGDMYQARTTLFHKSHDKIAESLPPETHGKVAAAVFNLGYLPGGDKSITTNGSSTIKAIEQLLSIMKDEGLIVLVVYHGHPEGKAEKNDVLEFCRDLDQQTARVLTYGFINQQNDPPFIVAIEKKAQISKGHHHHHHG
Putative rRNA methylase YtqB C 202 Ligusticum Chuanxiong , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MILKKILPYSKELLKMAAGEGDIVVDATMGNGHDTQFLAELVGENGHVYAFDIQESAVANTKERLGDMYQARTTLFHKSHDKIAESLPPETHGKVAAAVFNLGYLPGGDKSITTNGSSTIKAIEQLLSIMKDEGLIVLVVYHGHPEGKAEKNDVLEFCRDLDQQTARVLTYGFINQQNDPPFIVAIEKKAQISKGHHHHHHG
Putative rRNA methylase YtqB D 202 Ligusticum Chuanxiong , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MILKKILPYSKELLKMAAGEGDIVVDATMGNGHDTQFLAELVGENGHVYAFDIQESAVANTKERLGDMYQARTTLFHKSHDKIAESLPPETHGKVAAAVFNLGYLPGGDKSITTNGSSTIKAIEQLLSIMKDEGLIVLVVYHGHPEGKAEKNDVLEFCRDLDQQTARVLTYGFINQQNDPPFIVAIEKKAQISKGHHHHHHG

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(*AP*CP*GP*GP*AP*CP*UP*UP*UP*GP*AP*CP*UP*CP*CP*GP*U)-3') x 17 NA ACGGACUUUGACUCCGU
RNA (5'-R(*AP*CP*GP*GP*AP*CP*UP*UP*UP*GP*AP*CP*UP*CP*CP*GP*U)-3') y 17 NA ACGGACUUUGACUCCGU
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2022-09-30
Deposition Author(s): Cho, G. , Kim, J. , Lee, J.