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8GZZ

Local refinement of sars-cov-2 omicron ba.1 spike glycoprotein in complex with rabbit monoclonal antibody 1h1 fab

PDB DOI: 10.2210/pdb8gzz/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Oryctolagus Cuniculus , Severe Acute Respiratory Syndrome Coronavirus 2

Deposited: 2022-09-27
Deposition Author(s): Gao, Y. , Guo, H. , Ji, X. , Lu, Y. , Yang, H.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.52 Å

8gzz
Literature

Local refinement of sars-cov-2 omicron ba.1 spike glycoprotein in complex with rabbit monoclonal antibody 1h1 fab

Gao, Y. , Guo, H. , Ji, X. , Lu, Y. , Yang, H.

Primary Citation of Related Structures: 8GZZ


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike protein S1 A 194 Oryctolagus Cuniculus , Severe Acute Respiratory Syndrome Coronavirus 2 NLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCYFPLRSYSFRPTYGVGHQPYRVVVLSFELLHAPATVCGP
Spike protein S1 B 194 Oryctolagus Cuniculus , Severe Acute Respiratory Syndrome Coronavirus 2 NLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCYFPLRSYSFRPTYGVGHQPYRVVVLSFELLHAPATVCGP
rabbit monoclonal antibody 1H1 Fab light chain D 111 Oryctolagus Cuniculus , Severe Acute Respiratory Syndrome Coronavirus 2 DIVMTQTPASVSEPVGGTVTIKCQASESISNWLAWYQQKPGQPPKLLIYAAFTLASGVPSRFKGSGSGTQFTLTINGVECADAATYYCQQTYSSRDVDNVFGGGTEVVVKG
rabbit monoclonal antibody 1H1 Fab light chain F 111 Oryctolagus Cuniculus , Severe Acute Respiratory Syndrome Coronavirus 2 DIVMTQTPASVSEPVGGTVTIKCQASESISNWLAWYQQKPGQPPKLLIYAAFTLASGVPSRFKGSGSGTQFTLTINGVECADAATYYCQQTYSSRDVDNVFGGGTEVVVKG
rabbit monoclonal antibody 1H1 Fab heavy chain E 122 Oryctolagus Cuniculus , Severe Acute Respiratory Syndrome Coronavirus 2 QSLEESGGDLVKPGASLTLTCTASGFSFSSGYDMCWVRQAPGKGLEWIACIGTGSSGNIYYASWAKGRFTISKTSSTTVTLQMTSLTAADTATYFCARDDADYAGPDYFNLWGPGTLVTVSS
rabbit monoclonal antibody 1H1 Fab heavy chain G 122 Oryctolagus Cuniculus , Severe Acute Respiratory Syndrome Coronavirus 2 QSLEESGGDLVKPGASLTLTCTASGFSFSSGYDMCWVRQAPGKGLEWIACIGTGSSGNIYYASWAKGRFTISKTSSTTVTLQMTSLTAADTATYFCARDDADYAGPDYFNLWGPGTLVTVSS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-09-27
Deposition Author(s): Gao, Y. , Guo, H. , Ji, X. , Lu, Y. , Yang, H.