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FASTA Sequence PDB Format mmCIF Format
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8GTA

Cryo-em structure of the marine siphophage vb_dshs-r4c capsid

PDB DOI: 10.2210/pdb8gta/pdb

Classification: VIRAL PROTEIN
Organism(s): Dinoroseobacter Phage Vb_Dshs-R4C

Deposited: 2022-09-07
Deposition Author(s): Huang, Y. , Li, S. , Sun, H. , Xia, N. , Zhang, R. , Zheng, Q.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.63 Å

8gta
Literature

Cryo-em structure of the marine siphophage vb_dshs-r4c capsid

Huang, Y. , Li, S. , Sun, H. , Xia, N. , Zhang, R. , Zheng, Q.

Primary Citation of Related Structures: 8GTA


Proteins
Molecule Chains Sequence Length Organism Sequence
Major capsid protein A 268 Dinoroseobacter Phage Vb_Dshs-R4C GGVLVAQDYRAGSFIELLRNRMALAGVGVRILQGLTGNVDIPKRTGASTMYFVDEDVDVTESDGAFGLVGMTPHTAGVATAITRRMMQQGSPDIEALVRDDLLTSLTLGLDKTALVGHSSPSAPNGVRDLVIGDALPFTGPFATFEELVDLETAVASANADVDSMAYIYNAATSGHFKKTLEFAGVSGTIERGGQVNGYNRVKSNQITTAGEVAFGNWSDVVIGMWSGLDLRVDTSTKAASDGKVLRVFTDIDVALRNVESIKWGVPA
Major capsid protein C 268 Dinoroseobacter Phage Vb_Dshs-R4C GGVLVAQDYRAGSFIELLRNRMALAGVGVRILQGLTGNVDIPKRTGASTMYFVDEDVDVTESDGAFGLVGMTPHTAGVATAITRRMMQQGSPDIEALVRDDLLTSLTLGLDKTALVGHSSPSAPNGVRDLVIGDALPFTGPFATFEELVDLETAVASANADVDSMAYIYNAATSGHFKKTLEFAGVSGTIERGGQVNGYNRVKSNQITTAGEVAFGNWSDVVIGMWSGLDLRVDTSTKAASDGKVLRVFTDIDVALRNVESIKWGVPA
Major capsid protein D 268 Dinoroseobacter Phage Vb_Dshs-R4C GGVLVAQDYRAGSFIELLRNRMALAGVGVRILQGLTGNVDIPKRTGASTMYFVDEDVDVTESDGAFGLVGMTPHTAGVATAITRRMMQQGSPDIEALVRDDLLTSLTLGLDKTALVGHSSPSAPNGVRDLVIGDALPFTGPFATFEELVDLETAVASANADVDSMAYIYNAATSGHFKKTLEFAGVSGTIERGGQVNGYNRVKSNQITTAGEVAFGNWSDVVIGMWSGLDLRVDTSTKAASDGKVLRVFTDIDVALRNVESIKWGVPA
Major capsid protein E 268 Dinoroseobacter Phage Vb_Dshs-R4C GGVLVAQDYRAGSFIELLRNRMALAGVGVRILQGLTGNVDIPKRTGASTMYFVDEDVDVTESDGAFGLVGMTPHTAGVATAITRRMMQQGSPDIEALVRDDLLTSLTLGLDKTALVGHSSPSAPNGVRDLVIGDALPFTGPFATFEELVDLETAVASANADVDSMAYIYNAATSGHFKKTLEFAGVSGTIERGGQVNGYNRVKSNQITTAGEVAFGNWSDVVIGMWSGLDLRVDTSTKAASDGKVLRVFTDIDVALRNVESIKWGVPA
Major capsid protein F 268 Dinoroseobacter Phage Vb_Dshs-R4C GGVLVAQDYRAGSFIELLRNRMALAGVGVRILQGLTGNVDIPKRTGASTMYFVDEDVDVTESDGAFGLVGMTPHTAGVATAITRRMMQQGSPDIEALVRDDLLTSLTLGLDKTALVGHSSPSAPNGVRDLVIGDALPFTGPFATFEELVDLETAVASANADVDSMAYIYNAATSGHFKKTLEFAGVSGTIERGGQVNGYNRVKSNQITTAGEVAFGNWSDVVIGMWSGLDLRVDTSTKAASDGKVLRVFTDIDVALRNVESIKWGVPA
Major capsid protein G 268 Dinoroseobacter Phage Vb_Dshs-R4C GGVLVAQDYRAGSFIELLRNRMALAGVGVRILQGLTGNVDIPKRTGASTMYFVDEDVDVTESDGAFGLVGMTPHTAGVATAITRRMMQQGSPDIEALVRDDLLTSLTLGLDKTALVGHSSPSAPNGVRDLVIGDALPFTGPFATFEELVDLETAVASANADVDSMAYIYNAATSGHFKKTLEFAGVSGTIERGGQVNGYNRVKSNQITTAGEVAFGNWSDVVIGMWSGLDLRVDTSTKAASDGKVLRVFTDIDVALRNVESIKWGVPA
Major capsid protein B 268 Dinoroseobacter Phage Vb_Dshs-R4C GGVLVAQDYRAGSFIELLRNRMALAGVGVRILQGLTGNVDIPKRTGASTMYFVDEDVDVTESDGAFGLVGMTPHTAGVATAITRRMMQQGSPDIEALVRDDLLTSLTLGLDKTALVGHSSPSAPNGVRDLVIGDALPFTGPFATFEELVDLETAVASANADVDSMAYIYNAATSGHFKKTLEFAGVSGTIERGGQVNGYNRVKSNQITTAGEVAFGNWSDVVIGMWSGLDLRVDTSTKAASDGKVLRVFTDIDVALRNVESIKWGVPA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-09-07
Deposition Author(s): Huang, Y. , Li, S. , Sun, H. , Xia, N. , Zhang, R. , Zheng, Q.