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FASTA Sequence PDB Format mmCIF Format
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8GRQ

Cryo-em structure of brca1/bard1 bound to h2ak127-ubch5c-ub nucleosome

PDB DOI: 10.2210/pdb8grq/pdb

Classification: NUCLEAR PROTEIN
Organism(s): Homo Sapiens

Deposited: 2022-09-02
Deposition Author(s): Ai, H.S. , Jia-Bin, L. , Jiakun, T. , Liu, L. , Liying, Z. , Man, P. , Zebin, T. , Zhiheng, D.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.87 Å

8grq
Literature

Cryo-em structure of brca1/bard1 bound to h2ak127-ubch5c-ub nucleosome

Ai, H.S. , Jia-Bin, L. , Jiakun, T. , Liu, L. , Liying, Z. , Man, P. , Zebin, T. , Zhiheng, D.

Primary Citation of Related Structures: 8GRQ


Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3 A 98 Homo Sapiens KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLSAIHAKRVTIMPKDIQLARRIRGER
Histone H3 E 98 Homo Sapiens KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLSAIHAKRVTIMPKDIQLARRIRGER
Histone H4 B 80 Homo Sapiens LRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG
Histone H4 F 80 Homo Sapiens LRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG
Histone H2A type 1-H C 110 Homo Sapiens ARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
Histone H2A type 1-H G 110 Homo Sapiens ARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
H2B D 188 Homo Sapiens RSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSARSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA
H2B H 188 Homo Sapiens RSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSARSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA
Breast cancer type 1 susceptibility protein K 92 Homo Sapiens LRVEEVQNVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQESTRFSQLVEELLKIICAFQLDT
BRCA1-associated RING domain protein 1 M 92 Homo Sapiens MEPDGRGAWAHSRAALDRLEKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIGTGCPVCYTPAWIQDLKINRQLDSMIQLCSKLRNLLHD
Ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), isoform CRA_a N 147 Homo Sapiens MALKRINKELSDLARDPPAQSSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSISSLLSDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (147-MER) i 147 NA ACAGGATGTATATATCTGACACGTGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCACCGGGATTCTCCAG
DNA (147-MER) j 147 NA CTGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATCCTGT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-09-02
Deposition Author(s): Ai, H.S. , Jia-Bin, L. , Jiakun, T. , Liu, L. , Liying, Z. , Man, P. , Zebin, T. , Zhiheng, D.