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8GPY

Crystal structure of omicron ba.4/5 rbd in complex with a neutralizing antibody scfv

PDB DOI: 10.2210/pdb8gpy/pdb

Classification: VIRAL PROTEIN
Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2

Deposited: 2022-08-27
Deposition Author(s): Gao, Y.X. , Guo, Y. , Song, Z.D. , Wang, W.M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.51 Å

8gpy
Literature

Crystal structure of omicron ba.4/5 rbd in complex with a neutralizing antibody scfv

Gao, Y.X. , Guo, Y. , Song, Z.D. , Wang, W.M.

Primary Citation of Related Structures: 8GPY


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike protein S1 A 201 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 TNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVGGNYNYRYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGVNCYFPLQSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSAAA
Spike protein S1 B 201 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 TNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVGGNYNYRYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGVNCYFPLQSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSAAA
scFv C 232 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 EVRLLESGGGLVQPGGSLRLSCAASGFTFNDYAMSWVRQAPGEGLEWVSTISYSGGSTYYADSVKGRFTISRDNSKNMLYLQMNSLRAEDTALYYCANGVATADWYFDLWGRGTLVTVSSQSALTQPRSVSGSPGQSVTISCTGTSSDVGGYNYVSWFQHHPGKAPKLMIYDVTDRPSGVPDRFSGSKSGNTASLTISGLQAEDAADYYCCSYAGTYTVFGGGTKLTVLAAA
scFv E 232 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 EVRLLESGGGLVQPGGSLRLSCAASGFTFNDYAMSWVRQAPGEGLEWVSTISYSGGSTYYADSVKGRFTISRDNSKNMLYLQMNSLRAEDTALYYCANGVATADWYFDLWGRGTLVTVSSQSALTQPRSVSGSPGQSVTISCTGTSSDVGGYNYVSWFQHHPGKAPKLMIYDVTDRPSGVPDRFSGSKSGNTASLTISGLQAEDAADYYCCSYAGTYTVFGGGTKLTVLAAA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2022-08-27
Deposition Author(s): Gao, Y.X. , Guo, Y. , Song, Z.D. , Wang, W.M.