PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8GPY

Crystal structure of omicron ba.4/5 rbd in complex with a neutralizing antibody scfv

PDB DOI: 10.2210/pdb8gpy/pdb

Classification: VIRAL PROTEIN
Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2

Deposited: 2022-08-27
Deposition Author(s): Gao, Y.X. , Guo, Y. , Song, Z.D. , Wang, W.M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.51 Å

Literature

Crystal structure of omicron ba.4/5 rbd in complex with a neutralizing antibody scfv

Gao, Y.X. , Guo, Y. , Song, Z.D. , Wang, W.M.

Primary Citation of Related Structures: 8GPY


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike protein S1 A 201 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 TNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVGGNYNYRYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGVNCYFPLQSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSAAA
Spike protein S1 B 201 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 TNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVGGNYNYRYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGVNCYFPLQSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSAAA
scFv C 232 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 EVRLLESGGGLVQPGGSLRLSCAASGFTFNDYAMSWVRQAPGEGLEWVSTISYSGGSTYYADSVKGRFTISRDNSKNMLYLQMNSLRAEDTALYYCANGVATADWYFDLWGRGTLVTVSSQSALTQPRSVSGSPGQSVTISCTGTSSDVGGYNYVSWFQHHPGKAPKLMIYDVTDRPSGVPDRFSGSKSGNTASLTISGLQAEDAADYYCCSYAGTYTVFGGGTKLTVLAAA
scFv E 232 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 EVRLLESGGGLVQPGGSLRLSCAASGFTFNDYAMSWVRQAPGEGLEWVSTISYSGGSTYYADSVKGRFTISRDNSKNMLYLQMNSLRAEDTALYYCANGVATADWYFDLWGRGTLVTVSSQSALTQPRSVSGSPGQSVTISCTGTSSDVGGYNYVSWFQHHPGKAPKLMIYDVTDRPSGVPDRFSGSKSGNTASLTISGLQAEDAADYYCCSYAGTYTVFGGGTKLTVLAAA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2022-08-27
Deposition Author(s): Gao, Y.X. , Guo, Y. , Song, Z.D. , Wang, W.M.