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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8GPU

Yfv_e_yd6fab_prefusion

PDB DOI: 10.2210/pdb8gpu/pdb

Classification: ANTIVIRAL PROTEIN
Organism(s): Homo Sapiens , Yellow Fever Virus

Deposited: 2022-08-27
Deposition Author(s): Gao, G.F. , Li, Y. , Qi, J. , Wu, L. , Yan, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.79 Å

8gpu
Literature

Yfv_e_yd6fab_prefusion

Gao, G.F. , Li, Y. , Qi, J. , Wu, L. , Yan, J.

Primary Citation of Related Structures: 8GPU


Proteins
Molecule Chains Sequence Length Organism Sequence
Envelope protein A 398 Homo Sapiens , Yellow Fever Virus AHCIGITDRDFIEGVHGGTWVSATLEQDKCVTVMAPDKPSLDISLQTVAIDGPAEARKVCYSAVLTHVKINDKCPSTGEAHLAEENDGDNACKRTYSDRGWGNGCGLFGKGSIVACAKFTCAKSMSLFEVDQTKIQYVIRAQLHVGAKQENWNTDIKTLKFDALSGSQEAEFTGYGKATLECQVQTAVDFGNSYIAEMEKDSWIVDRQWAQDLTLPWQSGSGGIWREMHHLVEFEPPHAATIRVLALGNQEGSLKTALTGAMRVTKDENDNNLYKLHGGHVSCRVKLSALTLKGTSYKMCTDKMSFVKNPTDTGHGTVVMQVKVPKGAPCKIPVIVADDLTAAVNKGILVTVNPIASTNDDEVLIEVNPPFGDSYIIVGTGDSRLTYQWHKEGSSIGK
Envelope protein E 398 Homo Sapiens , Yellow Fever Virus AHCIGITDRDFIEGVHGGTWVSATLEQDKCVTVMAPDKPSLDISLQTVAIDGPAEARKVCYSAVLTHVKINDKCPSTGEAHLAEENDGDNACKRTYSDRGWGNGCGLFGKGSIVACAKFTCAKSMSLFEVDQTKIQYVIRAQLHVGAKQENWNTDIKTLKFDALSGSQEAEFTGYGKATLECQVQTAVDFGNSYIAEMEKDSWIVDRQWAQDLTLPWQSGSGGIWREMHHLVEFEPPHAATIRVLALGNQEGSLKTALTGAMRVTKDENDNNLYKLHGGHVSCRVKLSALTLKGTSYKMCTDKMSFVKNPTDTGHGTVVMQVKVPKGAPCKIPVIVADDLTAAVNKGILVTVNPIASTNDDEVLIEVNPPFGDSYIIVGTGDSRLTYQWHKEGSSIGK
Envelope protein B 398 Homo Sapiens , Yellow Fever Virus AHCIGITDRDFIEGVHGGTWVSATLEQDKCVTVMAPDKPSLDISLQTVAIDGPAEARKVCYSAVLTHVKINDKCPSTGEAHLAEENDGDNACKRTYSDRGWGNGCGLFGKGSIVACAKFTCAKSMSLFEVDQTKIQYVIRAQLHVGAKQENWNTDIKTLKFDALSGSQEAEFTGYGKATLECQVQTAVDFGNSYIAEMEKDSWIVDRQWAQDLTLPWQSGSGGIWREMHHLVEFEPPHAATIRVLALGNQEGSLKTALTGAMRVTKDENDNNLYKLHGGHVSCRVKLSALTLKGTSYKMCTDKMSFVKNPTDTGHGTVVMQVKVPKGAPCKIPVIVADDLTAAVNKGILVTVNPIASTNDDEVLIEVNPPFGDSYIIVGTGDSRLTYQWHKEGSSIGK
Envelope protein I 398 Homo Sapiens , Yellow Fever Virus AHCIGITDRDFIEGVHGGTWVSATLEQDKCVTVMAPDKPSLDISLQTVAIDGPAEARKVCYSAVLTHVKINDKCPSTGEAHLAEENDGDNACKRTYSDRGWGNGCGLFGKGSIVACAKFTCAKSMSLFEVDQTKIQYVIRAQLHVGAKQENWNTDIKTLKFDALSGSQEAEFTGYGKATLECQVQTAVDFGNSYIAEMEKDSWIVDRQWAQDLTLPWQSGSGGIWREMHHLVEFEPPHAATIRVLALGNQEGSLKTALTGAMRVTKDENDNNLYKLHGGHVSCRVKLSALTLKGTSYKMCTDKMSFVKNPTDTGHGTVVMQVKVPKGAPCKIPVIVADDLTAAVNKGILVTVNPIASTNDDEVLIEVNPPFGDSYIIVGTGDSRLTYQWHKEGSSIGK
Envelope protein M 398 Homo Sapiens , Yellow Fever Virus AHCIGITDRDFIEGVHGGTWVSATLEQDKCVTVMAPDKPSLDISLQTVAIDGPAEARKVCYSAVLTHVKINDKCPSTGEAHLAEENDGDNACKRTYSDRGWGNGCGLFGKGSIVACAKFTCAKSMSLFEVDQTKIQYVIRAQLHVGAKQENWNTDIKTLKFDALSGSQEAEFTGYGKATLECQVQTAVDFGNSYIAEMEKDSWIVDRQWAQDLTLPWQSGSGGIWREMHHLVEFEPPHAATIRVLALGNQEGSLKTALTGAMRVTKDENDNNLYKLHGGHVSCRVKLSALTLKGTSYKMCTDKMSFVKNPTDTGHGTVVMQVKVPKGAPCKIPVIVADDLTAAVNKGILVTVNPIASTNDDEVLIEVNPPFGDSYIIVGTGDSRLTYQWHKEGSSIGK
Envelope protein P 398 Homo Sapiens , Yellow Fever Virus AHCIGITDRDFIEGVHGGTWVSATLEQDKCVTVMAPDKPSLDISLQTVAIDGPAEARKVCYSAVLTHVKINDKCPSTGEAHLAEENDGDNACKRTYSDRGWGNGCGLFGKGSIVACAKFTCAKSMSLFEVDQTKIQYVIRAQLHVGAKQENWNTDIKTLKFDALSGSQEAEFTGYGKATLECQVQTAVDFGNSYIAEMEKDSWIVDRQWAQDLTLPWQSGSGGIWREMHHLVEFEPPHAATIRVLALGNQEGSLKTALTGAMRVTKDENDNNLYKLHGGHVSCRVKLSALTLKGTSYKMCTDKMSFVKNPTDTGHGTVVMQVKVPKGAPCKIPVIVADDLTAAVNKGILVTVNPIASTNDDEVLIEVNPPFGDSYIIVGTGDSRLTYQWHKEGSSIGK
YD6Fab_H H 217 Homo Sapiens , Yellow Fever Virus EVQLVESGGGLVKPGGSLRLSCAASGFIFSDYYMMWIRQAPGKGLEWISYISSSGSQIYYTESVKGRFTISRDNGKNLLYLQMNSLRGEDTALYYCATETGWRIDTWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
YD6Fab_H F 217 Homo Sapiens , Yellow Fever Virus EVQLVESGGGLVKPGGSLRLSCAASGFIFSDYYMMWIRQAPGKGLEWISYISSSGSQIYYTESVKGRFTISRDNGKNLLYLQMNSLRGEDTALYYCATETGWRIDTWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
YD6Fab_H C 217 Homo Sapiens , Yellow Fever Virus EVQLVESGGGLVKPGGSLRLSCAASGFIFSDYYMMWIRQAPGKGLEWISYISSSGSQIYYTESVKGRFTISRDNGKNLLYLQMNSLRGEDTALYYCATETGWRIDTWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
YD6Fab_H J 217 Homo Sapiens , Yellow Fever Virus EVQLVESGGGLVKPGGSLRLSCAASGFIFSDYYMMWIRQAPGKGLEWISYISSSGSQIYYTESVKGRFTISRDNGKNLLYLQMNSLRGEDTALYYCATETGWRIDTWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
YD6Fab_H N 217 Homo Sapiens , Yellow Fever Virus EVQLVESGGGLVKPGGSLRLSCAASGFIFSDYYMMWIRQAPGKGLEWISYISSSGSQIYYTESVKGRFTISRDNGKNLLYLQMNSLRGEDTALYYCATETGWRIDTWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
YD6Fab_H Q 217 Homo Sapiens , Yellow Fever Virus EVQLVESGGGLVKPGGSLRLSCAASGFIFSDYYMMWIRQAPGKGLEWISYISSSGSQIYYTESVKGRFTISRDNGKNLLYLQMNSLRGEDTALYYCATETGWRIDTWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
YD6Fab_L L 217 Homo Sapiens , Yellow Fever Virus QAVLTQPASVSGSPGQSITISCTGTGSNIETYNLVSWYQRHPGKAPKLILYEVSERPSGVSNRFSGSKSGNTASLTISGLQAEDEADYFCCSYADTNIFWVFGGGTHLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
YD6Fab_L G 217 Homo Sapiens , Yellow Fever Virus QAVLTQPASVSGSPGQSITISCTGTGSNIETYNLVSWYQRHPGKAPKLILYEVSERPSGVSNRFSGSKSGNTASLTISGLQAEDEADYFCCSYADTNIFWVFGGGTHLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
YD6Fab_L D 217 Homo Sapiens , Yellow Fever Virus QAVLTQPASVSGSPGQSITISCTGTGSNIETYNLVSWYQRHPGKAPKLILYEVSERPSGVSNRFSGSKSGNTASLTISGLQAEDEADYFCCSYADTNIFWVFGGGTHLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
YD6Fab_L K 217 Homo Sapiens , Yellow Fever Virus QAVLTQPASVSGSPGQSITISCTGTGSNIETYNLVSWYQRHPGKAPKLILYEVSERPSGVSNRFSGSKSGNTASLTISGLQAEDEADYFCCSYADTNIFWVFGGGTHLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
YD6Fab_L O 217 Homo Sapiens , Yellow Fever Virus QAVLTQPASVSGSPGQSITISCTGTGSNIETYNLVSWYQRHPGKAPKLILYEVSERPSGVSNRFSGSKSGNTASLTISGLQAEDEADYFCCSYADTNIFWVFGGGTHLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
YD6Fab_L R 217 Homo Sapiens , Yellow Fever Virus QAVLTQPASVSGSPGQSITISCTGTGSNIETYNLVSWYQRHPGKAPKLILYEVSERPSGVSNRFSGSKSGNTASLTISGLQAEDEADYFCCSYADTNIFWVFGGGTHLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2022-08-27
Deposition Author(s): Gao, G.F. , Li, Y. , Qi, J. , Wu, L. , Yan, J.